Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4036 and EX28DRAFT_4037 overlap by 4 nucleotides EX28DRAFT_4037 and EX28DRAFT_4038 are separated by 16 nucleotides EX28DRAFT_4038 and EX28DRAFT_4039 are separated by 48 nucleotides
EX28DRAFT_4036: EX28DRAFT_4036 - UDP-N-acetylmuramate dehydrogenase (EC 1.1.1.158), at 414 to 1,442
_4036
EX28DRAFT_4037: EX28DRAFT_4037 - birA, biotin-[acetyl-CoA-carboxylase] ligase region/BirA biotin operon repressor domain, at 1,439 to 2,401
_4037
EX28DRAFT_4038: EX28DRAFT_4038 - Glycosyl hydrolases family 8, at 2,418 to 3,410
_4038
EX28DRAFT_4039: EX28DRAFT_4039 - cellulose synthase operon protein YhjU, at 3,459 to 5,138
_4039
Position (kb)
2
3
4 Strain fitness (log2 ratio)
-1
0
1 at 1.450 kb on + strand at 2.413 kb on + strand at 2.505 kb on + strand at 2.506 kb on - strand at 2.689 kb on - strand, within EX28DRAFT_4038 at 2.699 kb on + strand, within EX28DRAFT_4038 at 2.699 kb on + strand, within EX28DRAFT_4038 at 2.832 kb on - strand, within EX28DRAFT_4038 at 2.832 kb on - strand, within EX28DRAFT_4038 at 2.866 kb on - strand, within EX28DRAFT_4038 at 2.907 kb on - strand, within EX28DRAFT_4038 at 2.941 kb on - strand, within EX28DRAFT_4038 at 3.132 kb on + strand, within EX28DRAFT_4038 at 3.132 kb on + strand, within EX28DRAFT_4038 at 3.132 kb on + strand, within EX28DRAFT_4038 at 3.133 kb on - strand, within EX28DRAFT_4038 at 3.157 kb on - strand, within EX28DRAFT_4038 at 3.277 kb on - strand, within EX28DRAFT_4038 at 3.363 kb on + strand at 3.363 kb on + strand at 3.364 kb on - strand at 3.366 kb on + strand at 3.408 kb on + strand at 3.453 kb on - strand at 3.460 kb on + strand at 3.460 kb on + strand at 3.502 kb on + strand at 3.502 kb on + strand at 3.503 kb on - strand at 3.503 kb on - strand at 3.908 kb on + strand, within EX28DRAFT_4039 at 3.908 kb on + strand, within EX28DRAFT_4039 at 3.909 kb on - strand, within EX28DRAFT_4039 at 3.909 kb on - strand, within EX28DRAFT_4039 at 3.909 kb on - strand, within EX28DRAFT_4039 at 3.911 kb on - strand, within EX28DRAFT_4039 at 3.969 kb on - strand, within EX28DRAFT_4039 at 4.243 kb on + strand, within EX28DRAFT_4039
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,450 + +0.5 2,413 + -0.1 2,505 + +0.5 2,506 - -1.3 2,689 - EX28DRAFT_4038 0.27 +0.6 2,699 + EX28DRAFT_4038 0.28 -0.5 2,699 + EX28DRAFT_4038 0.28 +0.3 2,832 - EX28DRAFT_4038 0.42 +0.0 2,832 - EX28DRAFT_4038 0.42 -0.3 2,866 - EX28DRAFT_4038 0.45 +0.6 2,907 - EX28DRAFT_4038 0.49 -0.4 2,941 - EX28DRAFT_4038 0.53 +1.0 3,132 + EX28DRAFT_4038 0.72 +0.7 3,132 + EX28DRAFT_4038 0.72 +0.5 3,132 + EX28DRAFT_4038 0.72 +0.1 3,133 - EX28DRAFT_4038 0.72 +0.2 3,157 - EX28DRAFT_4038 0.74 +0.3 3,277 - EX28DRAFT_4038 0.87 -0.6 3,363 + +0.5 3,363 + +0.7 3,364 - +0.5 3,366 + +0.4 3,408 + -1.0 3,453 - +0.2 3,460 + +0.2 3,460 + +0.3 3,502 + -0.8 3,502 + +0.1 3,503 - +0.5 3,503 - +0.5 3,908 + EX28DRAFT_4039 0.27 +1.0 3,908 + EX28DRAFT_4039 0.27 +0.3 3,909 - EX28DRAFT_4039 0.27 -0.3 3,909 - EX28DRAFT_4039 0.27 +0.2 3,909 - EX28DRAFT_4039 0.27 +0.5 3,911 - EX28DRAFT_4039 0.27 +0.2 3,969 - EX28DRAFT_4039 0.30 -1.3 4,243 + EX28DRAFT_4039 0.47 +0.5
Or see this region's nucleotide sequence