Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3863 and EX28DRAFT_3864 are separated by 9 nucleotides EX28DRAFT_3864 and EX28DRAFT_3865 are separated by 21 nucleotides EX28DRAFT_3865 and EX28DRAFT_3866 are separated by 3 nucleotides
EX28DRAFT_3863: EX28DRAFT_3863 - phosphoglycerate mutase (EC 5.4.2.1), at 71,562 to 73,133
_3863
EX28DRAFT_3864: EX28DRAFT_3864 - Membrane-bound metallopeptidase, at 73,143 to 74,426
_3864
EX28DRAFT_3865: EX28DRAFT_3865 - Uncharacterized protein conserved in bacteria, at 74,448 to 75,362
_3865
EX28DRAFT_3866: EX28DRAFT_3866 - Glycosyltransferases involved in cell wall biogenesis, at 75,366 to 76,166
_3866
Position (kb) 73
74
75 Strain fitness (log2 ratio) -1
0
1 at 72.151 kb on - strand, within EX28DRAFT_3863 at 72.153 kb on + strand, within EX28DRAFT_3863 at 72.153 kb on + strand, within EX28DRAFT_3863 at 72.199 kb on - strand, within EX28DRAFT_3863 at 72.199 kb on - strand, within EX28DRAFT_3863 at 72.267 kb on + strand, within EX28DRAFT_3863 at 72.268 kb on - strand, within EX28DRAFT_3863 at 72.268 kb on - strand, within EX28DRAFT_3863 at 72.578 kb on + strand, within EX28DRAFT_3863 at 72.691 kb on - strand, within EX28DRAFT_3863 at 72.759 kb on - strand, within EX28DRAFT_3863 at 72.779 kb on + strand, within EX28DRAFT_3863 at 72.780 kb on - strand, within EX28DRAFT_3863 at 72.842 kb on - strand, within EX28DRAFT_3863 at 72.842 kb on - strand, within EX28DRAFT_3863 at 72.842 kb on - strand, within EX28DRAFT_3863 at 73.002 kb on + strand at 73.002 kb on + strand at 73.003 kb on - strand at 73.014 kb on - strand at 73.082 kb on + strand at 73.109 kb on + strand at 73.241 kb on - strand at 73.371 kb on - strand, within EX28DRAFT_3864 at 73.446 kb on - strand, within EX28DRAFT_3864 at 73.617 kb on + strand, within EX28DRAFT_3864 at 73.626 kb on + strand, within EX28DRAFT_3864 at 73.653 kb on - strand, within EX28DRAFT_3864 at 74.119 kb on + strand, within EX28DRAFT_3864 at 74.120 kb on - strand, within EX28DRAFT_3864 at 74.120 kb on - strand, within EX28DRAFT_3864 at 74.268 kb on + strand, within EX28DRAFT_3864 at 74.424 kb on + strand at 74.491 kb on + strand at 74.492 kb on - strand at 74.493 kb on + strand at 74.493 kb on + strand at 74.493 kb on + strand at 74.494 kb on - strand at 74.494 kb on - strand at 74.494 kb on - strand at 74.760 kb on + strand, within EX28DRAFT_3865 at 74.761 kb on - strand, within EX28DRAFT_3865 at 74.799 kb on - strand, within EX28DRAFT_3865 at 74.945 kb on + strand, within EX28DRAFT_3865 at 75.003 kb on - strand, within EX28DRAFT_3865 at 75.168 kb on - strand, within EX28DRAFT_3865 at 75.239 kb on + strand, within EX28DRAFT_3865 at 75.240 kb on - strand, within EX28DRAFT_3865 at 75.262 kb on - strand, within EX28DRAFT_3865 at 75.262 kb on - strand, within EX28DRAFT_3865 at 75.303 kb on - strand at 75.308 kb on + strand at 75.308 kb on + strand at 75.321 kb on + strand at 75.321 kb on + strand at 75.322 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 72,151 - EX28DRAFT_3863 0.37 +0.0 72,153 + EX28DRAFT_3863 0.38 +0.6 72,153 + EX28DRAFT_3863 0.38 +0.0 72,199 - EX28DRAFT_3863 0.41 -0.5 72,199 - EX28DRAFT_3863 0.41 +0.3 72,267 + EX28DRAFT_3863 0.45 +0.1 72,268 - EX28DRAFT_3863 0.45 -0.2 72,268 - EX28DRAFT_3863 0.45 +0.1 72,578 + EX28DRAFT_3863 0.65 -0.3 72,691 - EX28DRAFT_3863 0.72 +0.1 72,759 - EX28DRAFT_3863 0.76 +0.1 72,779 + EX28DRAFT_3863 0.77 +0.4 72,780 - EX28DRAFT_3863 0.77 +0.2 72,842 - EX28DRAFT_3863 0.81 +0.9 72,842 - EX28DRAFT_3863 0.81 -0.6 72,842 - EX28DRAFT_3863 0.81 -0.4 73,002 + -0.1 73,002 + +0.5 73,003 - -1.4 73,014 - -0.1 73,082 + -0.0 73,109 + +0.2 73,241 - +0.6 73,371 - EX28DRAFT_3864 0.18 -0.3 73,446 - EX28DRAFT_3864 0.24 -1.2 73,617 + EX28DRAFT_3864 0.37 +0.0 73,626 + EX28DRAFT_3864 0.38 -0.4 73,653 - EX28DRAFT_3864 0.40 -0.4 74,119 + EX28DRAFT_3864 0.76 -0.8 74,120 - EX28DRAFT_3864 0.76 -0.7 74,120 - EX28DRAFT_3864 0.76 -1.4 74,268 + EX28DRAFT_3864 0.88 -0.7 74,424 + -0.0 74,491 + -0.2 74,492 - +0.7 74,493 + -0.2 74,493 + +0.2 74,493 + +0.6 74,494 - +0.7 74,494 - +0.6 74,494 - -0.0 74,760 + EX28DRAFT_3865 0.34 -0.8 74,761 - EX28DRAFT_3865 0.34 -0.4 74,799 - EX28DRAFT_3865 0.38 -0.0 74,945 + EX28DRAFT_3865 0.54 -0.4 75,003 - EX28DRAFT_3865 0.61 -0.2 75,168 - EX28DRAFT_3865 0.79 -0.0 75,239 + EX28DRAFT_3865 0.86 +0.6 75,240 - EX28DRAFT_3865 0.87 -0.4 75,262 - EX28DRAFT_3865 0.89 +0.3 75,262 - EX28DRAFT_3865 0.89 +0.5 75,303 - -0.3 75,308 + +0.7 75,308 + -0.3 75,321 + +0.2 75,321 + -0.4 75,322 - +0.2
Or see this region's nucleotide sequence