Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3273 and EX28DRAFT_3274 overlap by 21 nucleotides EX28DRAFT_3274 and EX28DRAFT_3275 are separated by 646 nucleotides
EX28DRAFT_3273: EX28DRAFT_3273 - Predicted ATPase, at 566,695 to 568,197
_3273
EX28DRAFT_3274: EX28DRAFT_3274 - radical SAM protein, TIGR01212 family, at 568,177 to 569,160
_3274
EX28DRAFT_3275: EX28DRAFT_3275 - Glutamate synthase domain 2, at 569,807 to 574,267
_3275
Position (kb) 568
569
570 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 567.254 kb on + strand, within EX28DRAFT_3273 at 567.380 kb on - strand, within EX28DRAFT_3273 at 567.434 kb on - strand, within EX28DRAFT_3273 at 567.527 kb on + strand, within EX28DRAFT_3273 at 567.798 kb on + strand, within EX28DRAFT_3273 at 568.036 kb on - strand, within EX28DRAFT_3273 at 568.152 kb on - strand at 568.176 kb on - strand at 568.396 kb on - strand, within EX28DRAFT_3274 at 568.396 kb on - strand, within EX28DRAFT_3274 at 568.396 kb on - strand, within EX28DRAFT_3274 at 568.397 kb on + strand, within EX28DRAFT_3274 at 568.485 kb on + strand, within EX28DRAFT_3274 at 568.707 kb on - strand, within EX28DRAFT_3274 at 568.818 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.859 kb on + strand, within EX28DRAFT_3274 at 569.095 kb on - strand at 569.101 kb on + strand at 569.111 kb on - strand at 569.214 kb on + strand at 569.215 kb on - strand at 569.532 kb on + strand at 569.532 kb on + strand at 569.616 kb on + strand at 569.621 kb on - strand at 569.804 kb on + strand at 569.806 kb on + strand at 569.806 kb on + strand at 569.807 kb on - strand at 569.807 kb on - strand at 569.807 kb on - strand at 569.807 kb on - strand at 569.807 kb on - strand at 569.813 kb on + strand at 569.814 kb on - strand at 569.836 kb on + strand at 569.865 kb on + strand at 569.865 kb on + strand at 569.865 kb on + strand at 569.866 kb on - strand at 569.866 kb on - strand at 569.866 kb on - strand at 569.866 kb on - strand at 569.866 kb on - strand at 569.866 kb on - strand at 569.889 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 567,254 + EX28DRAFT_3273 0.37 +0.3 567,380 - EX28DRAFT_3273 0.46 +1.2 567,434 - EX28DRAFT_3273 0.49 +0.7 567,527 + EX28DRAFT_3273 0.55 -0.5 567,798 + EX28DRAFT_3273 0.73 +0.1 568,036 - EX28DRAFT_3273 0.89 +0.4 568,152 - +0.3 568,176 - +0.2 568,396 - EX28DRAFT_3274 0.22 +0.1 568,396 - EX28DRAFT_3274 0.22 +0.7 568,396 - EX28DRAFT_3274 0.22 -0.7 568,397 + EX28DRAFT_3274 0.22 -0.8 568,485 + EX28DRAFT_3274 0.31 -0.1 568,707 - EX28DRAFT_3274 0.54 -0.2 568,818 - EX28DRAFT_3274 0.65 -0.4 568,822 - EX28DRAFT_3274 0.66 +0.0 568,822 - EX28DRAFT_3274 0.66 -0.2 568,822 - EX28DRAFT_3274 0.66 -1.2 568,822 - EX28DRAFT_3274 0.66 +0.6 568,859 + EX28DRAFT_3274 0.69 +0.0 569,095 - +1.3 569,101 + +0.4 569,111 - -0.0 569,214 + -0.5 569,215 - -0.2 569,532 + -0.3 569,532 + -0.9 569,616 + -2.0 569,621 - -2.8 569,804 + -0.5 569,806 + -2.2 569,806 + -4.3 569,807 - -0.8 569,807 - -3.1 569,807 - -3.7 569,807 - -1.1 569,807 - -2.0 569,813 + -3.5 569,814 - +2.0 569,836 + -0.5 569,865 + -3.3 569,865 + -2.7 569,865 + -2.1 569,866 - -1.4 569,866 - -1.0 569,866 - +1.4 569,866 - -3.6 569,866 - -1.3 569,866 - -1.3 569,889 + -2.0
Or see this region's nucleotide sequence