Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3259 and EX28DRAFT_3260 overlap by 4 nucleotides EX28DRAFT_3260 and EX28DRAFT_3261 are separated by 39 nucleotides EX28DRAFT_3261 and EX28DRAFT_3262 overlap by 4 nucleotides EX28DRAFT_3262 and EX28DRAFT_3263 are separated by 116 nucleotides EX28DRAFT_3263 and EX28DRAFT_3264 are separated by 4 nucleotides
EX28DRAFT_3259: EX28DRAFT_3259 - Predicted P-loop-containing kinase, at 550,502 to 551,356
_3259
EX28DRAFT_3260: EX28DRAFT_3260 - Phosphotransferase System HPr (HPr) Family, at 551,353 to 551,625
_3260
EX28DRAFT_3261: EX28DRAFT_3261 - monofunctional biosynthetic peptidoglycan transglycosylase, at 551,665 to 552,390
_3261
EX28DRAFT_3262: EX28DRAFT_3262 - Uncharacterized protein involved in an early stage of isoprenoid biosynthesis, at 552,387 to 553,043
_3262
EX28DRAFT_3263: EX28DRAFT_3263 - RNA, at 553,160 to 553,268
_3263
EX28DRAFT_3264: EX28DRAFT_3264 - PAS domain S-box, at 553,273 to 555,606
_3264
Position (kb) 551
552
553 Strain fitness (log2 ratio) -1
0
1 at 550.676 kb on - strand, within EX28DRAFT_3259 at 551.155 kb on + strand, within EX28DRAFT_3259 at 551.215 kb on + strand, within EX28DRAFT_3259 at 551.216 kb on - strand, within EX28DRAFT_3259 at 551.633 kb on + strand at 551.666 kb on + strand at 551.667 kb on - strand at 551.667 kb on - strand at 551.670 kb on + strand at 551.671 kb on - strand at 551.671 kb on - strand at 551.671 kb on - strand at 551.671 kb on - strand at 551.676 kb on + strand at 551.676 kb on + strand at 551.677 kb on - strand at 551.677 kb on - strand at 551.677 kb on - strand at 551.677 kb on - strand at 551.677 kb on - strand at 551.680 kb on - strand at 551.725 kb on - strand at 551.751 kb on - strand, within EX28DRAFT_3261 at 551.751 kb on - strand, within EX28DRAFT_3261 at 551.852 kb on + strand, within EX28DRAFT_3261 at 551.881 kb on + strand, within EX28DRAFT_3261 at 551.912 kb on + strand, within EX28DRAFT_3261 at 552.001 kb on - strand, within EX28DRAFT_3261 at 552.215 kb on + strand, within EX28DRAFT_3261 at 552.295 kb on + strand, within EX28DRAFT_3261 at 552.296 kb on - strand, within EX28DRAFT_3261 at 552.335 kb on - strand at 552.335 kb on - strand at 552.465 kb on - strand, within EX28DRAFT_3262 at 552.465 kb on - strand, within EX28DRAFT_3262 at 552.465 kb on - strand, within EX28DRAFT_3262 at 552.466 kb on + strand, within EX28DRAFT_3262 at 552.492 kb on - strand, within EX28DRAFT_3262 at 552.691 kb on - strand, within EX28DRAFT_3262 at 552.734 kb on + strand, within EX28DRAFT_3262 at 552.806 kb on + strand, within EX28DRAFT_3262 at 552.807 kb on - strand, within EX28DRAFT_3262 at 552.819 kb on - strand, within EX28DRAFT_3262 at 552.834 kb on - strand, within EX28DRAFT_3262 at 552.852 kb on + strand, within EX28DRAFT_3262 at 552.984 kb on + strand at 552.985 kb on - strand at 553.001 kb on - strand at 553.127 kb on - strand at 553.148 kb on + strand at 553.149 kb on - strand at 553.149 kb on - strand at 553.152 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 550,676 - EX28DRAFT_3259 0.20 -1.5 551,155 + EX28DRAFT_3259 0.76 -0.6 551,215 + EX28DRAFT_3259 0.83 -0.8 551,216 - EX28DRAFT_3259 0.84 -0.4 551,633 + -0.5 551,666 + -0.5 551,667 - +0.1 551,667 - -0.1 551,670 + -0.1 551,671 - -0.4 551,671 - -0.1 551,671 - +0.1 551,671 - +0.5 551,676 + +0.1 551,676 + +0.2 551,677 - -0.5 551,677 - -0.1 551,677 - +0.3 551,677 - -0.6 551,677 - +0.0 551,680 - -0.1 551,725 - +0.2 551,751 - EX28DRAFT_3261 0.12 -0.1 551,751 - EX28DRAFT_3261 0.12 +0.0 551,852 + EX28DRAFT_3261 0.26 +0.9 551,881 + EX28DRAFT_3261 0.30 +0.3 551,912 + EX28DRAFT_3261 0.34 +0.3 552,001 - EX28DRAFT_3261 0.46 +0.4 552,215 + EX28DRAFT_3261 0.76 +0.0 552,295 + EX28DRAFT_3261 0.87 -0.0 552,296 - EX28DRAFT_3261 0.87 +0.1 552,335 - +0.9 552,335 - -0.1 552,465 - EX28DRAFT_3262 0.12 +0.3 552,465 - EX28DRAFT_3262 0.12 +0.3 552,465 - EX28DRAFT_3262 0.12 -0.1 552,466 + EX28DRAFT_3262 0.12 +0.3 552,492 - EX28DRAFT_3262 0.16 -1.4 552,691 - EX28DRAFT_3262 0.46 +0.2 552,734 + EX28DRAFT_3262 0.53 +0.5 552,806 + EX28DRAFT_3262 0.64 -0.0 552,807 - EX28DRAFT_3262 0.64 -0.3 552,819 - EX28DRAFT_3262 0.66 -1.0 552,834 - EX28DRAFT_3262 0.68 -0.2 552,852 + EX28DRAFT_3262 0.71 +1.0 552,984 + -0.2 552,985 - -0.3 553,001 - +1.3 553,127 - +0.1 553,148 + +0.1 553,149 - +0.3 553,149 - +0.6 553,152 + -0.3
Or see this region's nucleotide sequence