Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3210 and EX28DRAFT_3211 are separated by 142 nucleotides EX28DRAFT_3211 and EX28DRAFT_3212 are separated by 180 nucleotides
EX28DRAFT_3210: EX28DRAFT_3210 - aromatic amino acid transport protein, at 508,484 to 509,728
_3210
EX28DRAFT_3211: EX28DRAFT_3211 - Superfamily II DNA and RNA helicases, at 509,871 to 511,766
_3211
EX28DRAFT_3212: EX28DRAFT_3212 - Lipoprotein NlpI, contains TPR repeats, at 511,947 to 512,831
_3212
Position (kb) 509
510
511
512 Strain fitness (log2 ratio) -1
0
1 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.011 kb on - strand, within EX28DRAFT_3210 at 509.079 kb on + strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.258 kb on + strand, within EX28DRAFT_3210 at 509.261 kb on + strand, within EX28DRAFT_3210 at 509.430 kb on + strand, within EX28DRAFT_3210 at 509.430 kb on + strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.435 kb on + strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.523 kb on + strand, within EX28DRAFT_3210 at 509.841 kb on - strand at 509.843 kb on - strand at 509.853 kb on - strand at 509.866 kb on - strand at 511.178 kb on + strand, within EX28DRAFT_3211 at 511.804 kb on - strand at 511.937 kb on - strand at 511.999 kb on - strand at 512.015 kb on - strand at 512.321 kb on - strand, within EX28DRAFT_3212 at 512.321 kb on - strand, within EX28DRAFT_3212 at 512.447 kb on - strand, within EX28DRAFT_3212 at 512.527 kb on - strand, within EX28DRAFT_3212 at 512.613 kb on - strand, within EX28DRAFT_3212 at 512.617 kb on + strand, within EX28DRAFT_3212 at 512.637 kb on + strand, within EX28DRAFT_3212 at 512.683 kb on - strand, within EX28DRAFT_3212 at 512.756 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 509,010 + EX28DRAFT_3210 0.42 -0.2 509,010 + EX28DRAFT_3210 0.42 +0.8 509,010 + EX28DRAFT_3210 0.42 +0.7 509,011 - EX28DRAFT_3210 0.42 -0.2 509,079 + EX28DRAFT_3210 0.48 +0.3 509,080 - EX28DRAFT_3210 0.48 -0.0 509,080 - EX28DRAFT_3210 0.48 +0.5 509,080 - EX28DRAFT_3210 0.48 -0.5 509,258 + EX28DRAFT_3210 0.62 -0.1 509,261 + EX28DRAFT_3210 0.62 -0.6 509,430 + EX28DRAFT_3210 0.76 +0.6 509,430 + EX28DRAFT_3210 0.76 -0.2 509,431 - EX28DRAFT_3210 0.76 +0.3 509,431 - EX28DRAFT_3210 0.76 -0.4 509,431 - EX28DRAFT_3210 0.76 -0.9 509,435 + EX28DRAFT_3210 0.76 -0.5 509,436 - EX28DRAFT_3210 0.76 +0.6 509,436 - EX28DRAFT_3210 0.76 +1.5 509,436 - EX28DRAFT_3210 0.76 +0.3 509,523 + EX28DRAFT_3210 0.83 -0.4 509,841 - -0.2 509,843 - +0.1 509,853 - +0.1 509,866 - +0.0 511,178 + EX28DRAFT_3211 0.69 -0.2 511,804 - +0.2 511,937 - +1.1 511,999 - -0.0 512,015 - +0.0 512,321 - EX28DRAFT_3212 0.42 -0.3 512,321 - EX28DRAFT_3212 0.42 +0.0 512,447 - EX28DRAFT_3212 0.56 -1.0 512,527 - EX28DRAFT_3212 0.66 +0.9 512,613 - EX28DRAFT_3212 0.75 -0.2 512,617 + EX28DRAFT_3212 0.76 +0.1 512,637 + EX28DRAFT_3212 0.78 -0.2 512,683 - EX28DRAFT_3212 0.83 +0.2 512,756 + -0.4
Or see this region's nucleotide sequence