Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3151 and EX28DRAFT_3152 are separated by 178 nucleotides EX28DRAFT_3152 and EX28DRAFT_3153 are separated by 106 nucleotides
EX28DRAFT_3151: EX28DRAFT_3151 - Sugar (pentulose and hexulose) kinases, at 451,732 to 453,327
_3151
EX28DRAFT_3152: EX28DRAFT_3152 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 453,506 to 455,527
_3152
EX28DRAFT_3153: EX28DRAFT_3153 - 16S RNA G1207 methylase RsmC, at 455,634 to 456,770
_3153
Position (kb) 453
454
455
456 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 452.722 kb on + strand, within EX28DRAFT_3151 at 452.723 kb on - strand, within EX28DRAFT_3151 at 452.783 kb on + strand, within EX28DRAFT_3151 at 452.784 kb on - strand, within EX28DRAFT_3151 at 452.805 kb on + strand, within EX28DRAFT_3151 at 452.806 kb on - strand, within EX28DRAFT_3151 at 452.816 kb on - strand, within EX28DRAFT_3151 at 452.835 kb on + strand, within EX28DRAFT_3151 at 452.835 kb on + strand, within EX28DRAFT_3151 at 453.056 kb on + strand, within EX28DRAFT_3151 at 453.194 kb on - strand at 453.226 kb on + strand at 453.227 kb on - strand at 453.341 kb on + strand at 453.341 kb on + strand at 453.342 kb on - strand at 453.342 kb on - strand at 453.342 kb on - strand at 453.396 kb on + strand at 453.461 kb on + strand at 453.461 kb on + strand at 453.490 kb on + strand at 453.505 kb on + strand at 453.505 kb on + strand at 453.506 kb on - strand at 453.506 kb on - strand at 453.506 kb on - strand at 453.638 kb on + strand at 453.638 kb on + strand at 453.639 kb on - strand at 453.639 kb on - strand at 453.837 kb on - strand, within EX28DRAFT_3152 at 454.007 kb on + strand, within EX28DRAFT_3152 at 454.070 kb on + strand, within EX28DRAFT_3152 at 454.138 kb on + strand, within EX28DRAFT_3152 at 454.785 kb on - strand, within EX28DRAFT_3152 at 454.822 kb on + strand, within EX28DRAFT_3152 at 454.843 kb on + strand, within EX28DRAFT_3152 at 454.958 kb on + strand, within EX28DRAFT_3152 at 454.958 kb on + strand, within EX28DRAFT_3152 at 454.958 kb on + strand, within EX28DRAFT_3152 at 454.958 kb on + strand, within EX28DRAFT_3152 at 454.958 kb on + strand, within EX28DRAFT_3152 at 454.968 kb on + strand, within EX28DRAFT_3152 at 454.968 kb on + strand, within EX28DRAFT_3152 at 454.968 kb on + strand, within EX28DRAFT_3152 at 454.969 kb on - strand, within EX28DRAFT_3152 at 454.969 kb on - strand, within EX28DRAFT_3152 at 454.969 kb on - strand, within EX28DRAFT_3152 at 454.969 kb on - strand, within EX28DRAFT_3152 at 454.969 kb on - strand, within EX28DRAFT_3152 at 454.969 kb on - strand, within EX28DRAFT_3152 at 455.045 kb on + strand, within EX28DRAFT_3152 at 455.045 kb on + strand, within EX28DRAFT_3152 at 455.045 kb on + strand, within EX28DRAFT_3152 at 455.045 kb on + strand, within EX28DRAFT_3152 at 455.046 kb on - strand, within EX28DRAFT_3152 at 455.046 kb on - strand, within EX28DRAFT_3152 at 455.049 kb on + strand, within EX28DRAFT_3152 at 455.050 kb on - strand, within EX28DRAFT_3152 at 455.197 kb on + strand, within EX28DRAFT_3152 at 455.298 kb on - strand, within EX28DRAFT_3152 at 455.376 kb on + strand at 455.376 kb on + strand at 455.376 kb on + strand at 455.376 kb on + strand at 455.626 kb on + strand at 455.626 kb on + strand at 455.627 kb on - strand at 455.761 kb on + strand, within EX28DRAFT_3153 at 455.761 kb on + strand, within EX28DRAFT_3153 at 456.237 kb on - strand, within EX28DRAFT_3153 at 456.242 kb on + strand, within EX28DRAFT_3153 at 456.242 kb on + strand, within EX28DRAFT_3153 at 456.242 kb on + strand, within EX28DRAFT_3153 at 456.243 kb on - strand, within EX28DRAFT_3153 at 456.243 kb on - strand, within EX28DRAFT_3153
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 452,722 + EX28DRAFT_3151 0.62 -0.0 452,723 - EX28DRAFT_3151 0.62 -0.3 452,783 + EX28DRAFT_3151 0.66 +0.2 452,784 - EX28DRAFT_3151 0.66 +0.2 452,805 + EX28DRAFT_3151 0.67 -0.9 452,806 - EX28DRAFT_3151 0.67 -0.1 452,816 - EX28DRAFT_3151 0.68 +3.4 452,835 + EX28DRAFT_3151 0.69 +0.2 452,835 + EX28DRAFT_3151 0.69 -0.1 453,056 + EX28DRAFT_3151 0.83 +0.1 453,194 - -0.2 453,226 + +0.4 453,227 - -0.5 453,341 + +0.0 453,341 + -0.4 453,342 - +0.5 453,342 - +0.2 453,342 - +1.0 453,396 + -0.1 453,461 + -0.9 453,461 + +0.0 453,490 + -0.6 453,505 + -0.4 453,505 + +0.6 453,506 - -0.1 453,506 - -0.7 453,506 - -0.6 453,638 + +0.2 453,638 + -0.8 453,639 - +0.3 453,639 - +0.1 453,837 - EX28DRAFT_3152 0.16 -0.0 454,007 + EX28DRAFT_3152 0.25 -0.1 454,070 + EX28DRAFT_3152 0.28 +0.2 454,138 + EX28DRAFT_3152 0.31 -0.3 454,785 - EX28DRAFT_3152 0.63 -0.2 454,822 + EX28DRAFT_3152 0.65 +0.1 454,843 + EX28DRAFT_3152 0.66 +0.1 454,958 + EX28DRAFT_3152 0.72 -0.9 454,958 + EX28DRAFT_3152 0.72 -2.0 454,958 + EX28DRAFT_3152 0.72 -0.3 454,958 + EX28DRAFT_3152 0.72 -0.0 454,958 + EX28DRAFT_3152 0.72 -0.2 454,968 + EX28DRAFT_3152 0.72 -0.1 454,968 + EX28DRAFT_3152 0.72 -0.2 454,968 + EX28DRAFT_3152 0.72 -0.5 454,969 - EX28DRAFT_3152 0.72 -0.1 454,969 - EX28DRAFT_3152 0.72 -0.2 454,969 - EX28DRAFT_3152 0.72 -0.1 454,969 - EX28DRAFT_3152 0.72 -0.3 454,969 - EX28DRAFT_3152 0.72 -0.1 454,969 - EX28DRAFT_3152 0.72 +0.1 455,045 + EX28DRAFT_3152 0.76 -0.6 455,045 + EX28DRAFT_3152 0.76 +0.1 455,045 + EX28DRAFT_3152 0.76 +0.3 455,045 + EX28DRAFT_3152 0.76 +0.0 455,046 - EX28DRAFT_3152 0.76 +1.8 455,046 - EX28DRAFT_3152 0.76 -0.9 455,049 + EX28DRAFT_3152 0.76 +0.4 455,050 - EX28DRAFT_3152 0.76 -0.2 455,197 + EX28DRAFT_3152 0.84 -0.3 455,298 - EX28DRAFT_3152 0.89 +0.1 455,376 + +0.0 455,376 + +0.7 455,376 + +0.5 455,376 + +0.2 455,626 + +0.2 455,626 + +0.4 455,627 - +0.2 455,761 + EX28DRAFT_3153 0.11 +0.5 455,761 + EX28DRAFT_3153 0.11 -0.3 456,237 - EX28DRAFT_3153 0.53 +0.6 456,242 + EX28DRAFT_3153 0.53 -0.3 456,242 + EX28DRAFT_3153 0.53 +0.4 456,242 + EX28DRAFT_3153 0.53 +0.6 456,243 - EX28DRAFT_3153 0.54 +0.4 456,243 - EX28DRAFT_3153 0.54 +0.2
Or see this region's nucleotide sequence