Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3058 and EX28DRAFT_3059 are separated by 104 nucleotides EX28DRAFT_3059 and EX28DRAFT_3060 are separated by 31 nucleotides EX28DRAFT_3060 and EX28DRAFT_3061 are separated by 141 nucleotides EX28DRAFT_3061 and EX28DRAFT_3062 are separated by 17 nucleotides
EX28DRAFT_3058: EX28DRAFT_3058 - Signal transduction histidine kinase, at 368,185 to 369,534
_3058
EX28DRAFT_3059: EX28DRAFT_3059 - Putative NADPH-quinone reductase (modulator of drug activity B), at 369,639 to 370,220
_3059
EX28DRAFT_3060: EX28DRAFT_3060 - Uncharacterized conserved protein, at 370,252 to 370,566
_3060
EX28DRAFT_3061: EX28DRAFT_3061 - BON domain/LysM domain, at 370,708 to 371,148
_3061
EX28DRAFT_3062: EX28DRAFT_3062 - transcriptional regulator, RpiR family, at 371,166 to 372,053
_3062
Position (kb) 369
370
371 Strain fitness (log2 ratio) -2
-1
0
1 at 369.020 kb on + strand, within EX28DRAFT_3058 at 369.020 kb on + strand, within EX28DRAFT_3058 at 369.132 kb on - strand, within EX28DRAFT_3058 at 369.615 kb on + strand at 369.637 kb on + strand at 369.686 kb on + strand at 369.686 kb on + strand at 369.780 kb on + strand, within EX28DRAFT_3059 at 369.824 kb on - strand, within EX28DRAFT_3059 at 369.824 kb on - strand, within EX28DRAFT_3059 at 369.871 kb on + strand, within EX28DRAFT_3059 at 369.879 kb on + strand, within EX28DRAFT_3059 at 369.880 kb on - strand, within EX28DRAFT_3059 at 369.918 kb on + strand, within EX28DRAFT_3059 at 369.993 kb on + strand, within EX28DRAFT_3059 at 369.995 kb on + strand, within EX28DRAFT_3059 at 369.995 kb on + strand, within EX28DRAFT_3059 at 370.176 kb on + strand at 370.177 kb on - strand at 370.177 kb on - strand at 370.188 kb on + strand at 370.219 kb on - strand at 370.219 kb on - strand at 370.245 kb on - strand at 370.564 kb on + strand at 370.656 kb on + strand at 370.671 kb on - strand at 370.671 kb on - strand at 370.676 kb on + strand at 370.677 kb on - strand at 370.677 kb on - strand at 370.749 kb on - strand at 370.749 kb on - strand at 370.756 kb on - strand, within EX28DRAFT_3061 at 370.770 kb on + strand, within EX28DRAFT_3061 at 370.815 kb on + strand, within EX28DRAFT_3061 at 370.815 kb on + strand, within EX28DRAFT_3061 at 370.831 kb on - strand, within EX28DRAFT_3061 at 370.831 kb on - strand, within EX28DRAFT_3061 at 370.842 kb on + strand, within EX28DRAFT_3061 at 370.990 kb on + strand, within EX28DRAFT_3061 at 370.990 kb on + strand, within EX28DRAFT_3061 at 370.990 kb on + strand, within EX28DRAFT_3061 at 370.993 kb on + strand, within EX28DRAFT_3061 at 370.993 kb on + strand, within EX28DRAFT_3061 at 371.025 kb on + strand, within EX28DRAFT_3061 at 371.042 kb on - strand, within EX28DRAFT_3061 at 371.059 kb on + strand, within EX28DRAFT_3061 at 371.060 kb on - strand, within EX28DRAFT_3061 at 371.065 kb on - strand, within EX28DRAFT_3061 at 371.134 kb on - strand at 371.203 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 369,020 + EX28DRAFT_3058 0.62 -1.9 369,020 + EX28DRAFT_3058 0.62 -2.0 369,132 - EX28DRAFT_3058 0.70 +0.4 369,615 + +0.2 369,637 + +0.1 369,686 + +0.6 369,686 + -0.1 369,780 + EX28DRAFT_3059 0.24 -0.4 369,824 - EX28DRAFT_3059 0.32 -1.0 369,824 - EX28DRAFT_3059 0.32 +0.5 369,871 + EX28DRAFT_3059 0.40 +0.4 369,879 + EX28DRAFT_3059 0.41 -1.0 369,880 - EX28DRAFT_3059 0.41 +0.6 369,918 + EX28DRAFT_3059 0.48 -0.2 369,993 + EX28DRAFT_3059 0.61 +1.2 369,995 + EX28DRAFT_3059 0.61 -0.1 369,995 + EX28DRAFT_3059 0.61 -1.1 370,176 + +0.2 370,177 - +1.4 370,177 - +0.5 370,188 + +0.1 370,219 - +0.9 370,219 - +0.1 370,245 - +0.0 370,564 + +0.0 370,656 + +0.1 370,671 - -0.5 370,671 - +0.3 370,676 + -0.0 370,677 - -0.2 370,677 - -0.1 370,749 - -0.2 370,749 - -0.0 370,756 - EX28DRAFT_3061 0.11 -0.0 370,770 + EX28DRAFT_3061 0.14 +0.8 370,815 + EX28DRAFT_3061 0.24 -0.7 370,815 + EX28DRAFT_3061 0.24 -0.3 370,831 - EX28DRAFT_3061 0.28 -0.3 370,831 - EX28DRAFT_3061 0.28 +0.6 370,842 + EX28DRAFT_3061 0.30 +0.3 370,990 + EX28DRAFT_3061 0.64 -0.3 370,990 + EX28DRAFT_3061 0.64 +0.1 370,990 + EX28DRAFT_3061 0.64 -0.3 370,993 + EX28DRAFT_3061 0.65 +0.9 370,993 + EX28DRAFT_3061 0.65 -1.9 371,025 + EX28DRAFT_3061 0.72 +0.1 371,042 - EX28DRAFT_3061 0.76 +0.4 371,059 + EX28DRAFT_3061 0.80 -2.1 371,060 - EX28DRAFT_3061 0.80 -0.8 371,065 - EX28DRAFT_3061 0.81 +0.4 371,134 - -0.2 371,203 - -0.0
Or see this region's nucleotide sequence