Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2633

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2632 and EX28DRAFT_2633 overlap by 11 nucleotidesEX28DRAFT_2633 and EX28DRAFT_2634 are separated by 187 nucleotides EX28DRAFT_2632: EX28DRAFT_2632 - Major Facilitator Superfamily, at 2,671,143 to 2,672,324 _2632 EX28DRAFT_2633: EX28DRAFT_2633 - Uncharacterised nucleotidyltransferase, at 2,672,314 to 2,673,429 _2633 EX28DRAFT_2634: EX28DRAFT_2634 - hypothetical protein, at 2,673,617 to 2,674,966 _2634 Position (kb) 2672 2673 2674Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2671.340 kb on + strand, within EX28DRAFT_2632at 2671.364 kb on + strand, within EX28DRAFT_2632at 2671.367 kb on - strand, within EX28DRAFT_2632at 2671.412 kb on + strand, within EX28DRAFT_2632at 2671.412 kb on + strand, within EX28DRAFT_2632at 2671.413 kb on - strand, within EX28DRAFT_2632at 2671.413 kb on - strand, within EX28DRAFT_2632at 2671.414 kb on + strand, within EX28DRAFT_2632at 2671.415 kb on - strand, within EX28DRAFT_2632at 2671.425 kb on + strand, within EX28DRAFT_2632at 2671.435 kb on + strand, within EX28DRAFT_2632at 2671.436 kb on - strand, within EX28DRAFT_2632at 2671.440 kb on - strand, within EX28DRAFT_2632at 2671.440 kb on - strand, within EX28DRAFT_2632at 2671.440 kb on - strand, within EX28DRAFT_2632at 2671.442 kb on + strand, within EX28DRAFT_2632at 2671.458 kb on + strand, within EX28DRAFT_2632at 2671.479 kb on - strand, within EX28DRAFT_2632at 2671.491 kb on + strand, within EX28DRAFT_2632at 2671.491 kb on + strand, within EX28DRAFT_2632at 2671.491 kb on + strand, within EX28DRAFT_2632at 2671.529 kb on + strand, within EX28DRAFT_2632at 2671.779 kb on - strand, within EX28DRAFT_2632at 2671.779 kb on - strand, within EX28DRAFT_2632at 2671.849 kb on + strand, within EX28DRAFT_2632at 2671.850 kb on - strand, within EX28DRAFT_2632at 2671.937 kb on + strand, within EX28DRAFT_2632at 2671.938 kb on - strand, within EX28DRAFT_2632at 2671.998 kb on + strand, within EX28DRAFT_2632at 2672.011 kb on - strand, within EX28DRAFT_2632at 2672.162 kb on + strand, within EX28DRAFT_2632at 2672.200 kb on - strand, within EX28DRAFT_2632at 2672.201 kb on + strand, within EX28DRAFT_2632at 2672.202 kb on - strand, within EX28DRAFT_2632at 2672.202 kb on - strand, within EX28DRAFT_2632at 2672.203 kb on + strand, within EX28DRAFT_2632at 2672.203 kb on + strand, within EX28DRAFT_2632at 2672.204 kb on - strand, within EX28DRAFT_2632at 2672.204 kb on - strand, within EX28DRAFT_2632at 2672.232 kb on + strandat 2672.233 kb on - strandat 2672.233 kb on - strandat 2672.236 kb on + strandat 2672.367 kb on + strandat 2672.433 kb on + strand, within EX28DRAFT_2633at 2672.703 kb on - strand, within EX28DRAFT_2633at 2673.178 kb on + strand, within EX28DRAFT_2633at 2673.184 kb on - strand, within EX28DRAFT_2633at 2673.209 kb on - strand, within EX28DRAFT_2633at 2673.254 kb on + strand, within EX28DRAFT_2633at 2673.255 kb on - strand, within EX28DRAFT_2633at 2673.518 kb on + strandat 2673.785 kb on - strand, within EX28DRAFT_2634at 2674.046 kb on + strand, within EX28DRAFT_2634at 2674.050 kb on - strand, within EX28DRAFT_2634at 2674.050 kb on - strand, within EX28DRAFT_2634at 2674.082 kb on - strand, within EX28DRAFT_2634at 2674.100 kb on + strand, within EX28DRAFT_2634at 2674.219 kb on + strand, within EX28DRAFT_2634at 2674.343 kb on + strand, within EX28DRAFT_2634at 2674.343 kb on + strand, within EX28DRAFT_2634at 2674.343 kb on + strand, within EX28DRAFT_2634at 2674.344 kb on - strand, within EX28DRAFT_2634at 2674.354 kb on - strand, within EX28DRAFT_2634at 2674.386 kb on + strand, within EX28DRAFT_2634at 2674.387 kb on - strand, within EX28DRAFT_2634at 2674.398 kb on + strand, within EX28DRAFT_2634at 2674.399 kb on - strand, within EX28DRAFT_2634at 2674.418 kb on - strand, within EX28DRAFT_2634at 2674.418 kb on - strand, within EX28DRAFT_2634

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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2,671,340 + EX28DRAFT_2632 0.17 -3.2
2,671,364 + EX28DRAFT_2632 0.19 -3.2
2,671,367 - EX28DRAFT_2632 0.19 -5.7
2,671,412 + EX28DRAFT_2632 0.23 -2.4
2,671,412 + EX28DRAFT_2632 0.23 -3.4
2,671,413 - EX28DRAFT_2632 0.23 +0.3
2,671,413 - EX28DRAFT_2632 0.23 -2.9
2,671,414 + EX28DRAFT_2632 0.23 -1.6
2,671,415 - EX28DRAFT_2632 0.23 -3.8
2,671,425 + EX28DRAFT_2632 0.24 -4.7
2,671,435 + EX28DRAFT_2632 0.25 -3.6
2,671,436 - EX28DRAFT_2632 0.25 -3.5
2,671,440 - EX28DRAFT_2632 0.25 -3.4
2,671,440 - EX28DRAFT_2632 0.25 -3.0
2,671,440 - EX28DRAFT_2632 0.25 -2.4
2,671,442 + EX28DRAFT_2632 0.25 -2.1
2,671,458 + EX28DRAFT_2632 0.27 -1.1
2,671,479 - EX28DRAFT_2632 0.28 -3.8
2,671,491 + EX28DRAFT_2632 0.29 -1.3
2,671,491 + EX28DRAFT_2632 0.29 -2.5
2,671,491 + EX28DRAFT_2632 0.29 -1.8
2,671,529 + EX28DRAFT_2632 0.33 -4.1
2,671,779 - EX28DRAFT_2632 0.54 -3.1
2,671,779 - EX28DRAFT_2632 0.54 -5.3
2,671,849 + EX28DRAFT_2632 0.60 -5.4
2,671,850 - EX28DRAFT_2632 0.60 -3.6
2,671,937 + EX28DRAFT_2632 0.67 -3.6
2,671,938 - EX28DRAFT_2632 0.67 -1.1
2,671,998 + EX28DRAFT_2632 0.72 -4.3
2,672,011 - EX28DRAFT_2632 0.73 -2.3
2,672,162 + EX28DRAFT_2632 0.86 -0.4
2,672,200 - EX28DRAFT_2632 0.89 -3.0
2,672,201 + EX28DRAFT_2632 0.90 -0.2
2,672,202 - EX28DRAFT_2632 0.90 -5.6
2,672,202 - EX28DRAFT_2632 0.90 -3.0
2,672,203 + EX28DRAFT_2632 0.90 -1.5
2,672,203 + EX28DRAFT_2632 0.90 -0.1
2,672,204 - EX28DRAFT_2632 0.90 -3.7
2,672,204 - EX28DRAFT_2632 0.90 -4.0
2,672,232 + +1.0
2,672,233 - -5.6
2,672,233 - -5.7
2,672,236 + -1.1
2,672,367 + -1.6
2,672,433 + EX28DRAFT_2633 0.11 -0.3
2,672,703 - EX28DRAFT_2633 0.35 -2.6
2,673,178 + EX28DRAFT_2633 0.77 -0.7
2,673,184 - EX28DRAFT_2633 0.78 -5.2
2,673,209 - EX28DRAFT_2633 0.80 -2.4
2,673,254 + EX28DRAFT_2633 0.84 -0.7
2,673,255 - EX28DRAFT_2633 0.84 -2.1
2,673,518 + -2.1
2,673,785 - EX28DRAFT_2634 0.12 -5.2
2,674,046 + EX28DRAFT_2634 0.32 +0.1
2,674,050 - EX28DRAFT_2634 0.32 -1.9
2,674,050 - EX28DRAFT_2634 0.32 -3.4
2,674,082 - EX28DRAFT_2634 0.34 -2.6
2,674,100 + EX28DRAFT_2634 0.36 -0.3
2,674,219 + EX28DRAFT_2634 0.45 -1.4
2,674,343 + EX28DRAFT_2634 0.54 -0.9
2,674,343 + EX28DRAFT_2634 0.54 -0.4
2,674,343 + EX28DRAFT_2634 0.54 -0.1
2,674,344 - EX28DRAFT_2634 0.54 -4.1
2,674,354 - EX28DRAFT_2634 0.55 -1.0
2,674,386 + EX28DRAFT_2634 0.57 -0.5
2,674,387 - EX28DRAFT_2634 0.57 -4.0
2,674,398 + EX28DRAFT_2634 0.58 -0.9
2,674,399 - EX28DRAFT_2634 0.58 -4.5
2,674,418 - EX28DRAFT_2634 0.59 -4.9
2,674,418 - EX28DRAFT_2634 0.59 -1.4

Or see this region's nucleotide sequence