Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2632 and EX28DRAFT_2633 overlap by 11 nucleotides EX28DRAFT_2633 and EX28DRAFT_2634 are separated by 187 nucleotides
EX28DRAFT_2632: EX28DRAFT_2632 - Major Facilitator Superfamily, at 2,671,143 to 2,672,324
_2632
EX28DRAFT_2633: EX28DRAFT_2633 - Uncharacterised nucleotidyltransferase, at 2,672,314 to 2,673,429
_2633
EX28DRAFT_2634: EX28DRAFT_2634 - hypothetical protein, at 2,673,617 to 2,674,966
_2634
Position (kb)
2672
2673
2674 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2671.340 kb on + strand, within EX28DRAFT_2632 at 2671.364 kb on + strand, within EX28DRAFT_2632 at 2671.367 kb on - strand, within EX28DRAFT_2632 at 2671.412 kb on + strand, within EX28DRAFT_2632 at 2671.412 kb on + strand, within EX28DRAFT_2632 at 2671.413 kb on - strand, within EX28DRAFT_2632 at 2671.413 kb on - strand, within EX28DRAFT_2632 at 2671.414 kb on + strand, within EX28DRAFT_2632 at 2671.415 kb on - strand, within EX28DRAFT_2632 at 2671.425 kb on + strand, within EX28DRAFT_2632 at 2671.435 kb on + strand, within EX28DRAFT_2632 at 2671.436 kb on - strand, within EX28DRAFT_2632 at 2671.440 kb on - strand, within EX28DRAFT_2632 at 2671.440 kb on - strand, within EX28DRAFT_2632 at 2671.440 kb on - strand, within EX28DRAFT_2632 at 2671.442 kb on + strand, within EX28DRAFT_2632 at 2671.458 kb on + strand, within EX28DRAFT_2632 at 2671.479 kb on - strand, within EX28DRAFT_2632 at 2671.491 kb on + strand, within EX28DRAFT_2632 at 2671.491 kb on + strand, within EX28DRAFT_2632 at 2671.491 kb on + strand, within EX28DRAFT_2632 at 2671.529 kb on + strand, within EX28DRAFT_2632 at 2671.779 kb on - strand, within EX28DRAFT_2632 at 2671.779 kb on - strand, within EX28DRAFT_2632 at 2671.849 kb on + strand, within EX28DRAFT_2632 at 2671.850 kb on - strand, within EX28DRAFT_2632 at 2671.937 kb on + strand, within EX28DRAFT_2632 at 2671.938 kb on - strand, within EX28DRAFT_2632 at 2671.998 kb on + strand, within EX28DRAFT_2632 at 2672.011 kb on - strand, within EX28DRAFT_2632 at 2672.162 kb on + strand, within EX28DRAFT_2632 at 2672.200 kb on - strand, within EX28DRAFT_2632 at 2672.201 kb on + strand, within EX28DRAFT_2632 at 2672.202 kb on - strand, within EX28DRAFT_2632 at 2672.202 kb on - strand, within EX28DRAFT_2632 at 2672.203 kb on + strand, within EX28DRAFT_2632 at 2672.203 kb on + strand, within EX28DRAFT_2632 at 2672.204 kb on - strand, within EX28DRAFT_2632 at 2672.204 kb on - strand, within EX28DRAFT_2632 at 2672.232 kb on + strand at 2672.233 kb on - strand at 2672.233 kb on - strand at 2672.236 kb on + strand at 2672.367 kb on + strand at 2672.433 kb on + strand, within EX28DRAFT_2633 at 2672.703 kb on - strand, within EX28DRAFT_2633 at 2673.178 kb on + strand, within EX28DRAFT_2633 at 2673.184 kb on - strand, within EX28DRAFT_2633 at 2673.209 kb on - strand, within EX28DRAFT_2633 at 2673.254 kb on + strand, within EX28DRAFT_2633 at 2673.255 kb on - strand, within EX28DRAFT_2633 at 2673.518 kb on + strand at 2673.785 kb on - strand, within EX28DRAFT_2634 at 2674.046 kb on + strand, within EX28DRAFT_2634 at 2674.050 kb on - strand, within EX28DRAFT_2634 at 2674.050 kb on - strand, within EX28DRAFT_2634 at 2674.082 kb on - strand, within EX28DRAFT_2634 at 2674.100 kb on + strand, within EX28DRAFT_2634 at 2674.219 kb on + strand, within EX28DRAFT_2634 at 2674.343 kb on + strand, within EX28DRAFT_2634 at 2674.343 kb on + strand, within EX28DRAFT_2634 at 2674.343 kb on + strand, within EX28DRAFT_2634 at 2674.344 kb on - strand, within EX28DRAFT_2634 at 2674.354 kb on - strand, within EX28DRAFT_2634 at 2674.386 kb on + strand, within EX28DRAFT_2634 at 2674.387 kb on - strand, within EX28DRAFT_2634 at 2674.398 kb on + strand, within EX28DRAFT_2634 at 2674.399 kb on - strand, within EX28DRAFT_2634 at 2674.418 kb on - strand, within EX28DRAFT_2634 at 2674.418 kb on - strand, within EX28DRAFT_2634
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,671,340 + EX28DRAFT_2632 0.17 -3.2 2,671,364 + EX28DRAFT_2632 0.19 -3.2 2,671,367 - EX28DRAFT_2632 0.19 -5.7 2,671,412 + EX28DRAFT_2632 0.23 -2.4 2,671,412 + EX28DRAFT_2632 0.23 -3.4 2,671,413 - EX28DRAFT_2632 0.23 +0.3 2,671,413 - EX28DRAFT_2632 0.23 -2.9 2,671,414 + EX28DRAFT_2632 0.23 -1.6 2,671,415 - EX28DRAFT_2632 0.23 -3.8 2,671,425 + EX28DRAFT_2632 0.24 -4.7 2,671,435 + EX28DRAFT_2632 0.25 -3.6 2,671,436 - EX28DRAFT_2632 0.25 -3.5 2,671,440 - EX28DRAFT_2632 0.25 -3.4 2,671,440 - EX28DRAFT_2632 0.25 -3.0 2,671,440 - EX28DRAFT_2632 0.25 -2.4 2,671,442 + EX28DRAFT_2632 0.25 -2.1 2,671,458 + EX28DRAFT_2632 0.27 -1.1 2,671,479 - EX28DRAFT_2632 0.28 -3.8 2,671,491 + EX28DRAFT_2632 0.29 -1.3 2,671,491 + EX28DRAFT_2632 0.29 -2.5 2,671,491 + EX28DRAFT_2632 0.29 -1.8 2,671,529 + EX28DRAFT_2632 0.33 -4.1 2,671,779 - EX28DRAFT_2632 0.54 -3.1 2,671,779 - EX28DRAFT_2632 0.54 -5.3 2,671,849 + EX28DRAFT_2632 0.60 -5.4 2,671,850 - EX28DRAFT_2632 0.60 -3.6 2,671,937 + EX28DRAFT_2632 0.67 -3.6 2,671,938 - EX28DRAFT_2632 0.67 -1.1 2,671,998 + EX28DRAFT_2632 0.72 -4.3 2,672,011 - EX28DRAFT_2632 0.73 -2.3 2,672,162 + EX28DRAFT_2632 0.86 -0.4 2,672,200 - EX28DRAFT_2632 0.89 -3.0 2,672,201 + EX28DRAFT_2632 0.90 -0.2 2,672,202 - EX28DRAFT_2632 0.90 -5.6 2,672,202 - EX28DRAFT_2632 0.90 -3.0 2,672,203 + EX28DRAFT_2632 0.90 -1.5 2,672,203 + EX28DRAFT_2632 0.90 -0.1 2,672,204 - EX28DRAFT_2632 0.90 -3.7 2,672,204 - EX28DRAFT_2632 0.90 -4.0 2,672,232 + +1.0 2,672,233 - -5.6 2,672,233 - -5.7 2,672,236 + -1.1 2,672,367 + -1.6 2,672,433 + EX28DRAFT_2633 0.11 -0.3 2,672,703 - EX28DRAFT_2633 0.35 -2.6 2,673,178 + EX28DRAFT_2633 0.77 -0.7 2,673,184 - EX28DRAFT_2633 0.78 -5.2 2,673,209 - EX28DRAFT_2633 0.80 -2.4 2,673,254 + EX28DRAFT_2633 0.84 -0.7 2,673,255 - EX28DRAFT_2633 0.84 -2.1 2,673,518 + -2.1 2,673,785 - EX28DRAFT_2634 0.12 -5.2 2,674,046 + EX28DRAFT_2634 0.32 +0.1 2,674,050 - EX28DRAFT_2634 0.32 -1.9 2,674,050 - EX28DRAFT_2634 0.32 -3.4 2,674,082 - EX28DRAFT_2634 0.34 -2.6 2,674,100 + EX28DRAFT_2634 0.36 -0.3 2,674,219 + EX28DRAFT_2634 0.45 -1.4 2,674,343 + EX28DRAFT_2634 0.54 -0.9 2,674,343 + EX28DRAFT_2634 0.54 -0.4 2,674,343 + EX28DRAFT_2634 0.54 -0.1 2,674,344 - EX28DRAFT_2634 0.54 -4.1 2,674,354 - EX28DRAFT_2634 0.55 -1.0 2,674,386 + EX28DRAFT_2634 0.57 -0.5 2,674,387 - EX28DRAFT_2634 0.57 -4.0 2,674,398 + EX28DRAFT_2634 0.58 -0.9 2,674,399 - EX28DRAFT_2634 0.58 -4.5 2,674,418 - EX28DRAFT_2634 0.59 -4.9 2,674,418 - EX28DRAFT_2634 0.59 -1.4
Or see this region's nucleotide sequence