Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2395 and EX28DRAFT_2396 are separated by 70 nucleotides EX28DRAFT_2396 and EX28DRAFT_2397 overlap by 1 nucleotides EX28DRAFT_2397 and EX28DRAFT_2398 overlap by 8 nucleotides
EX28DRAFT_2395: EX28DRAFT_2395 - ABC-type dipeptide transport system, periplasmic component, at 2,420,889 to 2,422,457
_2395
EX28DRAFT_2396: EX28DRAFT_2396 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 2,422,528 to 2,423,541
_2396
EX28DRAFT_2397: EX28DRAFT_2397 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 2,423,541 to 2,424,374
_2397
EX28DRAFT_2398: EX28DRAFT_2398 - ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component, at 2,424,367 to 2,425,203
_2398
Position (kb)
2422
2423
2424 Strain fitness (log2 ratio)
-1
0
1 at 2421.676 kb on + strand, within EX28DRAFT_2395 at 2421.677 kb on - strand, within EX28DRAFT_2395 at 2421.859 kb on - strand, within EX28DRAFT_2395 at 2422.098 kb on + strand, within EX28DRAFT_2395 at 2422.309 kb on - strand at 2422.367 kb on + strand at 2422.679 kb on - strand, within EX28DRAFT_2396 at 2422.680 kb on - strand, within EX28DRAFT_2396 at 2423.058 kb on + strand, within EX28DRAFT_2396 at 2423.095 kb on - strand, within EX28DRAFT_2396 at 2423.171 kb on - strand, within EX28DRAFT_2396 at 2423.173 kb on + strand, within EX28DRAFT_2396 at 2423.236 kb on + strand, within EX28DRAFT_2396 at 2423.237 kb on - strand, within EX28DRAFT_2396 at 2423.274 kb on - strand, within EX28DRAFT_2396 at 2423.551 kb on - strand at 2423.561 kb on - strand at 2424.048 kb on + strand, within EX28DRAFT_2397 at 2424.104 kb on + strand, within EX28DRAFT_2397 at 2424.136 kb on + strand, within EX28DRAFT_2397 at 2424.137 kb on - strand, within EX28DRAFT_2397 at 2424.137 kb on - strand, within EX28DRAFT_2397 at 2424.248 kb on + strand, within EX28DRAFT_2397
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,421,676 + EX28DRAFT_2395 0.50 -0.4 2,421,677 - EX28DRAFT_2395 0.50 +0.3 2,421,859 - EX28DRAFT_2395 0.62 -0.1 2,422,098 + EX28DRAFT_2395 0.77 -0.3 2,422,309 - -0.1 2,422,367 + -0.1 2,422,679 - EX28DRAFT_2396 0.15 -0.1 2,422,680 - EX28DRAFT_2396 0.15 +0.4 2,423,058 + EX28DRAFT_2396 0.52 +0.0 2,423,095 - EX28DRAFT_2396 0.56 -0.6 2,423,171 - EX28DRAFT_2396 0.63 -0.2 2,423,173 + EX28DRAFT_2396 0.64 -1.1 2,423,236 + EX28DRAFT_2396 0.70 +0.1 2,423,237 - EX28DRAFT_2396 0.70 -1.2 2,423,274 - EX28DRAFT_2396 0.74 +0.1 2,423,551 - -0.2 2,423,561 - +0.1 2,424,048 + EX28DRAFT_2397 0.61 +0.4 2,424,104 + EX28DRAFT_2397 0.68 -0.1 2,424,136 + EX28DRAFT_2397 0.71 +0.4 2,424,137 - EX28DRAFT_2397 0.71 -0.3 2,424,137 - EX28DRAFT_2397 0.71 +0.4 2,424,248 + EX28DRAFT_2397 0.85 -0.0
Or see this region's nucleotide sequence