Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2287 and EX28DRAFT_2288 are separated by 24 nucleotides EX28DRAFT_2288 and EX28DRAFT_2289 are separated by 183 nucleotides EX28DRAFT_2289 and EX28DRAFT_2290 are separated by 128 nucleotides EX28DRAFT_2290 and EX28DRAFT_2291 are separated by 155 nucleotides
EX28DRAFT_2287: EX28DRAFT_2287 - phosphoglucomutase, alpha-D-glucose phosphate-specific, at 2,315,264 to 2,316,904
_2287
EX28DRAFT_2288: EX28DRAFT_2288 - negative regulator of replication initiation SeqA, at 2,316,929 to 2,317,477
_2288
EX28DRAFT_2289: EX28DRAFT_2289 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,317,661 to 2,318,434
_2289
EX28DRAFT_2290: EX28DRAFT_2290 - Ribbon-helix-helix protein, copG family, at 2,318,563 to 2,318,850
_2290
EX28DRAFT_2291: EX28DRAFT_2291 - flavodoxin, long chain, at 2,319,006 to 2,319,536
_2291
Position (kb)
2317
2318
2319 Strain fitness (log2 ratio)
-2
-1
0
1 at 2316.661 kb on - strand, within EX28DRAFT_2287 at 2316.775 kb on + strand at 2316.776 kb on - strand at 2316.825 kb on + strand at 2316.825 kb on + strand at 2316.826 kb on - strand at 2316.826 kb on - strand at 2316.931 kb on - strand at 2317.180 kb on - strand, within EX28DRAFT_2288 at 2317.438 kb on + strand at 2317.439 kb on - strand at 2317.439 kb on - strand at 2317.498 kb on + strand at 2317.523 kb on - strand at 2317.523 kb on - strand at 2317.524 kb on + strand at 2317.524 kb on + strand at 2317.524 kb on + strand at 2317.524 kb on + strand at 2317.525 kb on - strand at 2317.582 kb on - strand at 2317.639 kb on + strand at 2317.639 kb on + strand at 2317.639 kb on + strand at 2317.639 kb on + strand at 2317.639 kb on + strand at 2317.639 kb on + strand at 2317.640 kb on - strand at 2317.643 kb on + strand at 2317.643 kb on + strand at 2317.644 kb on - strand at 2317.705 kb on + strand at 2317.793 kb on - strand, within EX28DRAFT_2289 at 2317.797 kb on + strand, within EX28DRAFT_2289 at 2317.976 kb on - strand, within EX28DRAFT_2289 at 2318.015 kb on + strand, within EX28DRAFT_2289 at 2318.119 kb on + strand, within EX28DRAFT_2289 at 2318.204 kb on + strand, within EX28DRAFT_2289 at 2318.204 kb on + strand, within EX28DRAFT_2289 at 2318.204 kb on + strand, within EX28DRAFT_2289 at 2318.204 kb on + strand, within EX28DRAFT_2289 at 2318.498 kb on + strand at 2318.498 kb on + strand at 2318.499 kb on - strand at 2318.499 kb on - strand at 2318.499 kb on - strand at 2318.587 kb on - strand at 2318.848 kb on + strand at 2318.848 kb on + strand at 2318.848 kb on + strand at 2318.848 kb on + strand at 2318.848 kb on + strand at 2318.849 kb on - strand at 2318.883 kb on + strand at 2318.908 kb on + strand at 2318.908 kb on + strand at 2318.909 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,316,661 - EX28DRAFT_2287 0.85 +0.0 2,316,775 + -1.5 2,316,776 - -1.9 2,316,825 + +0.8 2,316,825 + -0.5 2,316,826 - -1.3 2,316,826 - +0.6 2,316,931 - +0.3 2,317,180 - EX28DRAFT_2288 0.46 +0.1 2,317,438 + -0.3 2,317,439 - +0.3 2,317,439 - -0.0 2,317,498 + -0.2 2,317,523 - -0.0 2,317,523 - +0.2 2,317,524 + +0.5 2,317,524 + +0.4 2,317,524 + +0.1 2,317,524 + -0.6 2,317,525 - +0.8 2,317,582 - +0.2 2,317,639 + -0.1 2,317,639 + +0.1 2,317,639 + +0.7 2,317,639 + -1.5 2,317,639 + -0.3 2,317,639 + -0.6 2,317,640 - +0.1 2,317,643 + +0.0 2,317,643 + +0.8 2,317,644 - +0.1 2,317,705 + +0.3 2,317,793 - EX28DRAFT_2289 0.17 +0.4 2,317,797 + EX28DRAFT_2289 0.18 +0.4 2,317,976 - EX28DRAFT_2289 0.41 -0.2 2,318,015 + EX28DRAFT_2289 0.46 +0.5 2,318,119 + EX28DRAFT_2289 0.59 -0.1 2,318,204 + EX28DRAFT_2289 0.70 -0.3 2,318,204 + EX28DRAFT_2289 0.70 +1.7 2,318,204 + EX28DRAFT_2289 0.70 +0.1 2,318,204 + EX28DRAFT_2289 0.70 +1.2 2,318,498 + +0.8 2,318,498 + +0.1 2,318,499 - +1.1 2,318,499 - +0.3 2,318,499 - -0.3 2,318,587 - +0.4 2,318,848 + +0.2 2,318,848 + -0.1 2,318,848 + +0.1 2,318,848 + +0.9 2,318,848 + +0.7 2,318,849 - +0.3 2,318,883 + -0.0 2,318,908 + +0.1 2,318,908 + -0.2 2,318,909 - -1.8
Or see this region's nucleotide sequence