Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2199 and EX28DRAFT_2200 overlap by 39 nucleotides EX28DRAFT_2200 and EX28DRAFT_2201 are separated by 133 nucleotides EX28DRAFT_2201 and EX28DRAFT_2202 overlap by 4 nucleotides
EX28DRAFT_2199: EX28DRAFT_2199 - ABC-type multidrug transport system, permease component, at 2,223,636 to 2,224,742
_2199
EX28DRAFT_2200: EX28DRAFT_2200 - Putative inner membrane protein YbhQ, at 2,224,704 to 2,225,114
_2200
EX28DRAFT_2201: EX28DRAFT_2201 - Metal-dependent hydrolase, at 2,225,248 to 2,226,009
_2201
EX28DRAFT_2202: EX28DRAFT_2202 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes, at 2,226,006 to 2,227,244
_2202
Position (kb)
2225
2226
2227 Strain fitness (log2 ratio)
-1
0
1 at 2224.508 kb on + strand, within EX28DRAFT_2199 at 2224.537 kb on - strand, within EX28DRAFT_2199 at 2224.608 kb on - strand, within EX28DRAFT_2199 at 2224.874 kb on - strand, within EX28DRAFT_2200 at 2224.874 kb on - strand, within EX28DRAFT_2200 at 2224.941 kb on + strand, within EX28DRAFT_2200 at 2224.941 kb on + strand, within EX28DRAFT_2200 at 2225.061 kb on + strand, within EX28DRAFT_2200 at 2225.214 kb on - strand at 2225.247 kb on + strand at 2225.247 kb on + strand at 2225.248 kb on - strand at 2225.248 kb on - strand at 2225.277 kb on + strand at 2225.301 kb on + strand at 2225.455 kb on + strand, within EX28DRAFT_2201 at 2225.908 kb on + strand, within EX28DRAFT_2201 at 2225.909 kb on - strand, within EX28DRAFT_2201 at 2225.909 kb on - strand, within EX28DRAFT_2201 at 2226.006 kb on - strand at 2226.126 kb on - strand at 2226.288 kb on + strand, within EX28DRAFT_2202 at 2226.289 kb on - strand, within EX28DRAFT_2202 at 2226.289 kb on - strand, within EX28DRAFT_2202 at 2226.321 kb on - strand, within EX28DRAFT_2202 at 2226.392 kb on + strand, within EX28DRAFT_2202 at 2226.410 kb on + strand, within EX28DRAFT_2202 at 2226.410 kb on + strand, within EX28DRAFT_2202 at 2226.410 kb on + strand, within EX28DRAFT_2202 at 2226.410 kb on + strand, within EX28DRAFT_2202 at 2226.410 kb on + strand, within EX28DRAFT_2202 at 2226.411 kb on - strand, within EX28DRAFT_2202 at 2226.411 kb on - strand, within EX28DRAFT_2202 at 2226.411 kb on - strand, within EX28DRAFT_2202 at 2226.411 kb on - strand, within EX28DRAFT_2202 at 2226.445 kb on - strand, within EX28DRAFT_2202 at 2226.484 kb on + strand, within EX28DRAFT_2202 at 2226.639 kb on + strand, within EX28DRAFT_2202 at 2226.816 kb on + strand, within EX28DRAFT_2202 at 2226.816 kb on + strand, within EX28DRAFT_2202 at 2226.817 kb on - strand, within EX28DRAFT_2202 at 2226.817 kb on - strand, within EX28DRAFT_2202 at 2226.817 kb on - strand, within EX28DRAFT_2202 at 2226.817 kb on - strand, within EX28DRAFT_2202 at 2226.818 kb on + strand, within EX28DRAFT_2202 at 2226.818 kb on + strand, within EX28DRAFT_2202 at 2226.819 kb on - strand, within EX28DRAFT_2202 at 2226.819 kb on - strand, within EX28DRAFT_2202 at 2226.822 kb on + strand, within EX28DRAFT_2202 at 2226.822 kb on + strand, within EX28DRAFT_2202 at 2226.822 kb on + strand, within EX28DRAFT_2202 at 2226.823 kb on - strand, within EX28DRAFT_2202 at 2226.823 kb on - strand, within EX28DRAFT_2202 at 2226.849 kb on + strand, within EX28DRAFT_2202 at 2226.923 kb on + strand, within EX28DRAFT_2202
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,224,508 + EX28DRAFT_2199 0.79 -0.1 2,224,537 - EX28DRAFT_2199 0.81 -0.3 2,224,608 - EX28DRAFT_2199 0.88 -0.0 2,224,874 - EX28DRAFT_2200 0.41 -0.8 2,224,874 - EX28DRAFT_2200 0.41 +0.2 2,224,941 + EX28DRAFT_2200 0.58 -0.3 2,224,941 + EX28DRAFT_2200 0.58 -0.0 2,225,061 + EX28DRAFT_2200 0.87 -0.1 2,225,214 - +0.3 2,225,247 + +0.3 2,225,247 + +0.3 2,225,248 - -0.0 2,225,248 - -0.0 2,225,277 + +0.0 2,225,301 + -1.3 2,225,455 + EX28DRAFT_2201 0.27 -0.4 2,225,908 + EX28DRAFT_2201 0.87 -0.5 2,225,909 - EX28DRAFT_2201 0.87 +0.0 2,225,909 - EX28DRAFT_2201 0.87 -0.2 2,226,006 - +0.7 2,226,126 - +0.0 2,226,288 + EX28DRAFT_2202 0.23 +1.2 2,226,289 - EX28DRAFT_2202 0.23 +1.2 2,226,289 - EX28DRAFT_2202 0.23 -1.1 2,226,321 - EX28DRAFT_2202 0.25 +0.6 2,226,392 + EX28DRAFT_2202 0.31 +0.1 2,226,410 + EX28DRAFT_2202 0.33 +0.2 2,226,410 + EX28DRAFT_2202 0.33 -0.2 2,226,410 + EX28DRAFT_2202 0.33 -0.0 2,226,410 + EX28DRAFT_2202 0.33 -0.2 2,226,410 + EX28DRAFT_2202 0.33 -0.1 2,226,411 - EX28DRAFT_2202 0.33 -0.1 2,226,411 - EX28DRAFT_2202 0.33 -0.4 2,226,411 - EX28DRAFT_2202 0.33 +0.6 2,226,411 - EX28DRAFT_2202 0.33 -0.3 2,226,445 - EX28DRAFT_2202 0.35 +0.0 2,226,484 + EX28DRAFT_2202 0.39 -0.1 2,226,639 + EX28DRAFT_2202 0.51 -0.8 2,226,816 + EX28DRAFT_2202 0.65 -0.1 2,226,816 + EX28DRAFT_2202 0.65 +0.0 2,226,817 - EX28DRAFT_2202 0.65 +0.1 2,226,817 - EX28DRAFT_2202 0.65 -0.5 2,226,817 - EX28DRAFT_2202 0.65 +0.1 2,226,817 - EX28DRAFT_2202 0.65 -0.0 2,226,818 + EX28DRAFT_2202 0.66 -0.3 2,226,818 + EX28DRAFT_2202 0.66 +0.6 2,226,819 - EX28DRAFT_2202 0.66 -0.2 2,226,819 - EX28DRAFT_2202 0.66 -0.3 2,226,822 + EX28DRAFT_2202 0.66 -0.4 2,226,822 + EX28DRAFT_2202 0.66 +0.2 2,226,822 + EX28DRAFT_2202 0.66 -0.2 2,226,823 - EX28DRAFT_2202 0.66 +0.3 2,226,823 - EX28DRAFT_2202 0.66 +0.1 2,226,849 + EX28DRAFT_2202 0.68 -0.4 2,226,923 + EX28DRAFT_2202 0.74 +0.1
Or see this region's nucleotide sequence