Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2092 and EX28DRAFT_2093 overlap by 17 nucleotides EX28DRAFT_2093 and EX28DRAFT_2094 are separated by 116 nucleotides
EX28DRAFT_2092: EX28DRAFT_2092 - His Kinase A (phospho-acceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 2,115,872 to 2,117,341
_2092
EX28DRAFT_2093: EX28DRAFT_2093 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 2,117,325 to 2,118,032
_2093
EX28DRAFT_2094: EX28DRAFT_2094 - 23S rRNA (uracil-5-)-methyltransferase RumB, at 2,118,149 to 2,119,279
_2094
Position (kb)
2117
2118
2119 Strain fitness (log2 ratio)
-1
0
1
2 at 2116.331 kb on - strand, within EX28DRAFT_2092 at 2116.419 kb on + strand, within EX28DRAFT_2092 at 2116.755 kb on - strand, within EX28DRAFT_2092 at 2116.870 kb on + strand, within EX28DRAFT_2092 at 2116.871 kb on - strand, within EX28DRAFT_2092 at 2116.871 kb on - strand, within EX28DRAFT_2092 at 2116.875 kb on + strand, within EX28DRAFT_2092 at 2116.882 kb on - strand, within EX28DRAFT_2092 at 2116.933 kb on + strand, within EX28DRAFT_2092 at 2116.933 kb on + strand, within EX28DRAFT_2092 at 2117.079 kb on + strand, within EX28DRAFT_2092 at 2117.080 kb on - strand, within EX28DRAFT_2092 at 2117.080 kb on - strand, within EX28DRAFT_2092 at 2117.098 kb on + strand, within EX28DRAFT_2092 at 2117.183 kb on + strand, within EX28DRAFT_2092 at 2117.184 kb on - strand, within EX28DRAFT_2092 at 2117.362 kb on + strand at 2117.438 kb on + strand, within EX28DRAFT_2093 at 2117.438 kb on + strand, within EX28DRAFT_2093 at 2117.439 kb on - strand, within EX28DRAFT_2093 at 2117.447 kb on + strand, within EX28DRAFT_2093 at 2117.737 kb on + strand, within EX28DRAFT_2093 at 2118.056 kb on - strand at 2118.056 kb on - strand at 2118.056 kb on - strand at 2118.063 kb on - strand at 2118.063 kb on - strand at 2118.063 kb on - strand at 2118.063 kb on - strand at 2118.068 kb on + strand at 2118.193 kb on + strand at 2118.205 kb on + strand at 2118.288 kb on + strand, within EX28DRAFT_2094 at 2118.297 kb on + strand, within EX28DRAFT_2094 at 2118.321 kb on + strand, within EX28DRAFT_2094 at 2118.571 kb on + strand, within EX28DRAFT_2094 at 2118.571 kb on + strand, within EX28DRAFT_2094 at 2118.571 kb on + strand, within EX28DRAFT_2094 at 2118.572 kb on - strand, within EX28DRAFT_2094
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,116,331 - EX28DRAFT_2092 0.31 +1.0 2,116,419 + EX28DRAFT_2092 0.37 +0.6 2,116,755 - EX28DRAFT_2092 0.60 +0.3 2,116,870 + EX28DRAFT_2092 0.68 +0.1 2,116,871 - EX28DRAFT_2092 0.68 -0.2 2,116,871 - EX28DRAFT_2092 0.68 +0.0 2,116,875 + EX28DRAFT_2092 0.68 -0.9 2,116,882 - EX28DRAFT_2092 0.69 -0.0 2,116,933 + EX28DRAFT_2092 0.72 +0.1 2,116,933 + EX28DRAFT_2092 0.72 +0.4 2,117,079 + EX28DRAFT_2092 0.82 +0.4 2,117,080 - EX28DRAFT_2092 0.82 +0.8 2,117,080 - EX28DRAFT_2092 0.82 +0.2 2,117,098 + EX28DRAFT_2092 0.83 +0.3 2,117,183 + EX28DRAFT_2092 0.89 -0.1 2,117,184 - EX28DRAFT_2092 0.89 -0.1 2,117,362 + -0.0 2,117,438 + EX28DRAFT_2093 0.16 +0.1 2,117,438 + EX28DRAFT_2093 0.16 -0.1 2,117,439 - EX28DRAFT_2093 0.16 +1.4 2,117,447 + EX28DRAFT_2093 0.17 +0.2 2,117,737 + EX28DRAFT_2093 0.58 +0.2 2,118,056 - +0.6 2,118,056 - +0.2 2,118,056 - +0.3 2,118,063 - +0.4 2,118,063 - -0.2 2,118,063 - +1.9 2,118,063 - +0.5 2,118,068 + -0.6 2,118,193 + -0.4 2,118,205 + +0.1 2,118,288 + EX28DRAFT_2094 0.12 -0.1 2,118,297 + EX28DRAFT_2094 0.13 -0.2 2,118,321 + EX28DRAFT_2094 0.15 -0.2 2,118,571 + EX28DRAFT_2094 0.37 -0.1 2,118,571 + EX28DRAFT_2094 0.37 +0.6 2,118,571 + EX28DRAFT_2094 0.37 +0.8 2,118,572 - EX28DRAFT_2094 0.37 +0.1
Or see this region's nucleotide sequence