Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2071 and EX28DRAFT_2072 are separated by 1 nucleotides EX28DRAFT_2072 and EX28DRAFT_2073 overlap by 4 nucleotides EX28DRAFT_2073 and EX28DRAFT_2074 overlap by 8 nucleotides
EX28DRAFT_2071: EX28DRAFT_2071 - Type II secretory pathway, component PulL, at 2,097,108 to 2,098,262
_2071
EX28DRAFT_2072: EX28DRAFT_2072 - Type II secretory pathway, component PulK, at 2,098,264 to 2,099,283
_2072
EX28DRAFT_2073: EX28DRAFT_2073 - type II secretion system protein J, at 2,099,280 to 2,099,960
_2073
EX28DRAFT_2074: EX28DRAFT_2074 - type II secretion system protein I, at 2,099,953 to 2,100,336
_2074
Position (kb)
2098
2099
2100 Strain fitness (log2 ratio)
-1
0
1 at 2097.376 kb on + strand, within EX28DRAFT_2071 at 2097.376 kb on + strand, within EX28DRAFT_2071 at 2097.377 kb on - strand, within EX28DRAFT_2071 at 2097.379 kb on + strand, within EX28DRAFT_2071 at 2097.379 kb on + strand, within EX28DRAFT_2071 at 2097.415 kb on + strand, within EX28DRAFT_2071 at 2097.415 kb on + strand, within EX28DRAFT_2071 at 2097.483 kb on - strand, within EX28DRAFT_2071 at 2097.678 kb on + strand, within EX28DRAFT_2071 at 2097.797 kb on - strand, within EX28DRAFT_2071 at 2097.821 kb on + strand, within EX28DRAFT_2071 at 2097.822 kb on - strand, within EX28DRAFT_2071 at 2098.168 kb on + strand at 2098.169 kb on - strand at 2098.255 kb on - strand at 2098.265 kb on + strand at 2098.265 kb on + strand at 2098.593 kb on + strand, within EX28DRAFT_2072 at 2098.594 kb on - strand, within EX28DRAFT_2072 at 2098.603 kb on + strand, within EX28DRAFT_2072 at 2098.603 kb on + strand, within EX28DRAFT_2072 at 2098.799 kb on + strand, within EX28DRAFT_2072 at 2098.818 kb on - strand, within EX28DRAFT_2072 at 2098.818 kb on - strand, within EX28DRAFT_2072 at 2099.003 kb on + strand, within EX28DRAFT_2072 at 2099.003 kb on + strand, within EX28DRAFT_2072 at 2099.003 kb on + strand, within EX28DRAFT_2072 at 2099.004 kb on - strand, within EX28DRAFT_2072 at 2099.004 kb on - strand, within EX28DRAFT_2072 at 2099.004 kb on - strand, within EX28DRAFT_2072 at 2099.007 kb on + strand, within EX28DRAFT_2072 at 2099.154 kb on - strand, within EX28DRAFT_2072 at 2099.424 kb on - strand, within EX28DRAFT_2073 at 2099.424 kb on - strand, within EX28DRAFT_2073 at 2099.768 kb on - strand, within EX28DRAFT_2073 at 2099.791 kb on + strand, within EX28DRAFT_2073 at 2099.792 kb on - strand, within EX28DRAFT_2073 at 2099.916 kb on - strand at 2099.916 kb on - strand at 2099.916 kb on - strand at 2100.031 kb on + strand, within EX28DRAFT_2074 at 2100.076 kb on - strand, within EX28DRAFT_2074
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,097,376 + EX28DRAFT_2071 0.23 -0.3 2,097,376 + EX28DRAFT_2071 0.23 +0.0 2,097,377 - EX28DRAFT_2071 0.23 +0.1 2,097,379 + EX28DRAFT_2071 0.23 -0.1 2,097,379 + EX28DRAFT_2071 0.23 -0.5 2,097,415 + EX28DRAFT_2071 0.27 -0.9 2,097,415 + EX28DRAFT_2071 0.27 -0.2 2,097,483 - EX28DRAFT_2071 0.32 -0.1 2,097,678 + EX28DRAFT_2071 0.49 +0.3 2,097,797 - EX28DRAFT_2071 0.60 +0.1 2,097,821 + EX28DRAFT_2071 0.62 -0.1 2,097,822 - EX28DRAFT_2071 0.62 +0.1 2,098,168 + -0.0 2,098,169 - -1.2 2,098,255 - -0.5 2,098,265 + -0.1 2,098,265 + -0.7 2,098,593 + EX28DRAFT_2072 0.32 +0.4 2,098,594 - EX28DRAFT_2072 0.32 -0.1 2,098,603 + EX28DRAFT_2072 0.33 +0.4 2,098,603 + EX28DRAFT_2072 0.33 +0.0 2,098,799 + EX28DRAFT_2072 0.52 +0.1 2,098,818 - EX28DRAFT_2072 0.54 -0.2 2,098,818 - EX28DRAFT_2072 0.54 +0.3 2,099,003 + EX28DRAFT_2072 0.72 -0.2 2,099,003 + EX28DRAFT_2072 0.72 +0.5 2,099,003 + EX28DRAFT_2072 0.72 -0.1 2,099,004 - EX28DRAFT_2072 0.73 +0.3 2,099,004 - EX28DRAFT_2072 0.73 +0.2 2,099,004 - EX28DRAFT_2072 0.73 -0.3 2,099,007 + EX28DRAFT_2072 0.73 +0.2 2,099,154 - EX28DRAFT_2072 0.87 +0.1 2,099,424 - EX28DRAFT_2073 0.21 +0.3 2,099,424 - EX28DRAFT_2073 0.21 +0.7 2,099,768 - EX28DRAFT_2073 0.72 +0.6 2,099,791 + EX28DRAFT_2073 0.75 -0.5 2,099,792 - EX28DRAFT_2073 0.75 -0.1 2,099,916 - -0.1 2,099,916 - -1.7 2,099,916 - +0.2 2,100,031 + EX28DRAFT_2074 0.20 -0.3 2,100,076 - EX28DRAFT_2074 0.32 -1.5
Or see this region's nucleotide sequence