Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1832 and EX28DRAFT_1833 are separated by 2 nucleotides EX28DRAFT_1833 and EX28DRAFT_1834 are separated by 120 nucleotides EX28DRAFT_1834 and EX28DRAFT_1835 are separated by 91 nucleotides EX28DRAFT_1835 and EX28DRAFT_1836 are separated by 154 nucleotides
EX28DRAFT_1832: EX28DRAFT_1832 - conserved hypothetical protein, YceG family, at 1,849,350 to 1,850,372
_1832
EX28DRAFT_1833: EX28DRAFT_1833 - aminodeoxychorismate lyase, at 1,850,375 to 1,851,184
_1833
EX28DRAFT_1834: EX28DRAFT_1834 - beta-ketoacyl-acyl-carrier-protein synthase II, at 1,851,305 to 1,852,546
_1834
EX28DRAFT_1835: EX28DRAFT_1835 - acyl carrier protein, at 1,852,638 to 1,852,874
_1835
EX28DRAFT_1836: EX28DRAFT_1836 - 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100), at 1,853,029 to 1,853,763
_1836
Position (kb)
1851
1852
1853 Strain fitness (log2 ratio)
-1
0
1 at 1850.376 kb on + strand at 1850.377 kb on - strand at 1850.394 kb on - strand at 1850.460 kb on - strand, within EX28DRAFT_1833 at 1850.528 kb on - strand, within EX28DRAFT_1833 at 1850.595 kb on - strand, within EX28DRAFT_1833 at 1850.648 kb on + strand, within EX28DRAFT_1833 at 1850.731 kb on + strand, within EX28DRAFT_1833 at 1850.731 kb on + strand, within EX28DRAFT_1833 at 1850.732 kb on - strand, within EX28DRAFT_1833 at 1850.767 kb on + strand, within EX28DRAFT_1833 at 1850.767 kb on + strand, within EX28DRAFT_1833 at 1851.001 kb on + strand, within EX28DRAFT_1833 at 1851.002 kb on - strand, within EX28DRAFT_1833 at 1851.013 kb on + strand, within EX28DRAFT_1833 at 1851.026 kb on + strand, within EX28DRAFT_1833 at 1851.027 kb on - strand, within EX28DRAFT_1833 at 1851.209 kb on + strand at 1851.254 kb on + strand at 1851.282 kb on + strand at 1851.359 kb on - strand at 1851.359 kb on - strand at 1851.359 kb on - strand at 1851.490 kb on - strand, within EX28DRAFT_1834 at 1851.668 kb on - strand, within EX28DRAFT_1834 at 1851.745 kb on - strand, within EX28DRAFT_1834 at 1852.039 kb on + strand, within EX28DRAFT_1834 at 1852.040 kb on - strand, within EX28DRAFT_1834 at 1852.040 kb on - strand, within EX28DRAFT_1834 at 1852.190 kb on - strand, within EX28DRAFT_1834 at 1852.388 kb on + strand, within EX28DRAFT_1834
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,850,376 + +0.0 1,850,377 - +0.7 1,850,394 - -1.2 1,850,460 - EX28DRAFT_1833 0.10 -0.3 1,850,528 - EX28DRAFT_1833 0.19 -0.3 1,850,595 - EX28DRAFT_1833 0.27 -0.1 1,850,648 + EX28DRAFT_1833 0.34 -0.1 1,850,731 + EX28DRAFT_1833 0.44 +0.5 1,850,731 + EX28DRAFT_1833 0.44 +0.2 1,850,732 - EX28DRAFT_1833 0.44 +0.1 1,850,767 + EX28DRAFT_1833 0.48 -0.5 1,850,767 + EX28DRAFT_1833 0.48 -0.4 1,851,001 + EX28DRAFT_1833 0.77 -0.4 1,851,002 - EX28DRAFT_1833 0.77 -0.0 1,851,013 + EX28DRAFT_1833 0.79 -0.3 1,851,026 + EX28DRAFT_1833 0.80 +0.3 1,851,027 - EX28DRAFT_1833 0.80 -0.1 1,851,209 + +0.4 1,851,254 + -0.2 1,851,282 + +0.7 1,851,359 - -1.3 1,851,359 - -0.7 1,851,359 - -0.6 1,851,490 - EX28DRAFT_1834 0.15 -1.2 1,851,668 - EX28DRAFT_1834 0.29 -0.6 1,851,745 - EX28DRAFT_1834 0.35 +0.9 1,852,039 + EX28DRAFT_1834 0.59 -1.3 1,852,040 - EX28DRAFT_1834 0.59 -0.8 1,852,040 - EX28DRAFT_1834 0.59 -0.7 1,852,190 - EX28DRAFT_1834 0.71 -0.7 1,852,388 + EX28DRAFT_1834 0.87 +0.7
Or see this region's nucleotide sequence