Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1511 and EX28DRAFT_1512 are separated by 3 nucleotides EX28DRAFT_1512 and EX28DRAFT_1513 are separated by 28 nucleotides
EX28DRAFT_1511: EX28DRAFT_1511 - Predicted permease, at 1,524,978 to 1,526,012
_1511
EX28DRAFT_1512: EX28DRAFT_1512 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 1,526,016 to 1,526,963
_1512
EX28DRAFT_1513: EX28DRAFT_1513 - Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases, at 1,526,992 to 1,528,017
_1513
Position (kb)
1526
1527 Strain fitness (log2 ratio)
-1
0
1 at 1525.046 kb on - strand at 1525.077 kb on - strand at 1525.088 kb on + strand, within EX28DRAFT_1511 at 1525.119 kb on - strand, within EX28DRAFT_1511 at 1525.266 kb on + strand, within EX28DRAFT_1511 at 1525.266 kb on + strand, within EX28DRAFT_1511 at 1525.356 kb on + strand, within EX28DRAFT_1511 at 1525.357 kb on - strand, within EX28DRAFT_1511 at 1525.359 kb on - strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.681 kb on - strand, within EX28DRAFT_1511 at 1525.681 kb on - strand, within EX28DRAFT_1511 at 1525.681 kb on - strand, within EX28DRAFT_1511 at 1525.682 kb on + strand, within EX28DRAFT_1511 at 1525.753 kb on - strand, within EX28DRAFT_1511 at 1526.007 kb on - strand at 1526.011 kb on - strand at 1526.066 kb on - strand at 1526.069 kb on + strand at 1526.119 kb on + strand, within EX28DRAFT_1512 at 1526.138 kb on + strand, within EX28DRAFT_1512 at 1526.342 kb on - strand, within EX28DRAFT_1512 at 1526.595 kb on - strand, within EX28DRAFT_1512 at 1526.596 kb on + strand, within EX28DRAFT_1512 at 1526.596 kb on + strand, within EX28DRAFT_1512 at 1526.596 kb on + strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.647 kb on + strand, within EX28DRAFT_1512 at 1526.647 kb on + strand, within EX28DRAFT_1512 at 1526.648 kb on - strand, within EX28DRAFT_1512 at 1526.648 kb on - strand, within EX28DRAFT_1512 at 1526.668 kb on + strand, within EX28DRAFT_1512 at 1527.057 kb on - strand at 1527.088 kb on + strand at 1527.089 kb on - strand at 1527.091 kb on + strand at 1527.092 kb on - strand at 1527.092 kb on - strand at 1527.161 kb on + strand, within EX28DRAFT_1513 at 1527.239 kb on + strand, within EX28DRAFT_1513 at 1527.307 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.534 kb on + strand, within EX28DRAFT_1513 at 1527.534 kb on + strand, within EX28DRAFT_1513 at 1527.535 kb on - strand, within EX28DRAFT_1513 at 1527.535 kb on - strand, within EX28DRAFT_1513 at 1527.752 kb on + strand, within EX28DRAFT_1513 at 1527.752 kb on + strand, within EX28DRAFT_1513 at 1527.753 kb on - strand, within EX28DRAFT_1513 at 1527.753 kb on - strand, within EX28DRAFT_1513 at 1527.753 kb on - strand, within EX28DRAFT_1513 at 1527.849 kb on + strand, within EX28DRAFT_1513 at 1527.849 kb on + strand, within EX28DRAFT_1513 at 1527.881 kb on + strand, within EX28DRAFT_1513 at 1527.884 kb on - strand, within EX28DRAFT_1513
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,525,046 - -0.8 1,525,077 - +1.1 1,525,088 + EX28DRAFT_1511 0.11 +0.8 1,525,119 - EX28DRAFT_1511 0.14 -0.0 1,525,266 + EX28DRAFT_1511 0.28 -0.2 1,525,266 + EX28DRAFT_1511 0.28 -0.0 1,525,356 + EX28DRAFT_1511 0.37 -0.4 1,525,357 - EX28DRAFT_1511 0.37 +0.0 1,525,359 - EX28DRAFT_1511 0.37 +0.6 1,525,680 + EX28DRAFT_1511 0.68 +0.1 1,525,680 + EX28DRAFT_1511 0.68 +0.1 1,525,680 + EX28DRAFT_1511 0.68 -0.3 1,525,680 + EX28DRAFT_1511 0.68 +0.7 1,525,680 + EX28DRAFT_1511 0.68 -0.5 1,525,681 - EX28DRAFT_1511 0.68 +0.2 1,525,681 - EX28DRAFT_1511 0.68 +1.0 1,525,681 - EX28DRAFT_1511 0.68 +0.0 1,525,682 + EX28DRAFT_1511 0.68 -0.4 1,525,753 - EX28DRAFT_1511 0.75 -0.2 1,526,007 - -0.1 1,526,011 - +0.3 1,526,066 - +0.0 1,526,069 + -0.1 1,526,119 + EX28DRAFT_1512 0.11 +0.6 1,526,138 + EX28DRAFT_1512 0.13 -0.2 1,526,342 - EX28DRAFT_1512 0.34 +0.1 1,526,595 - EX28DRAFT_1512 0.61 -0.6 1,526,596 + EX28DRAFT_1512 0.61 +0.8 1,526,596 + EX28DRAFT_1512 0.61 -0.2 1,526,596 + EX28DRAFT_1512 0.61 -0.1 1,526,597 - EX28DRAFT_1512 0.61 +1.4 1,526,597 - EX28DRAFT_1512 0.61 +0.7 1,526,597 - EX28DRAFT_1512 0.61 +0.2 1,526,597 - EX28DRAFT_1512 0.61 +0.2 1,526,597 - EX28DRAFT_1512 0.61 -0.1 1,526,597 - EX28DRAFT_1512 0.61 +0.2 1,526,647 + EX28DRAFT_1512 0.67 -0.1 1,526,647 + EX28DRAFT_1512 0.67 +0.6 1,526,648 - EX28DRAFT_1512 0.67 +0.2 1,526,648 - EX28DRAFT_1512 0.67 +0.7 1,526,668 + EX28DRAFT_1512 0.69 -0.1 1,527,057 - -0.2 1,527,088 + -0.0 1,527,089 - +0.7 1,527,091 + +0.2 1,527,092 - -1.0 1,527,092 - +0.6 1,527,161 + EX28DRAFT_1513 0.16 -0.0 1,527,239 + EX28DRAFT_1513 0.24 -0.1 1,527,307 - EX28DRAFT_1513 0.31 -0.3 1,527,472 - EX28DRAFT_1513 0.47 -0.5 1,527,472 - EX28DRAFT_1513 0.47 +0.1 1,527,472 - EX28DRAFT_1513 0.47 -0.1 1,527,472 - EX28DRAFT_1513 0.47 +0.1 1,527,534 + EX28DRAFT_1513 0.53 -0.1 1,527,534 + EX28DRAFT_1513 0.53 +0.0 1,527,535 - EX28DRAFT_1513 0.53 +0.2 1,527,535 - EX28DRAFT_1513 0.53 +1.4 1,527,752 + EX28DRAFT_1513 0.74 +0.1 1,527,752 + EX28DRAFT_1513 0.74 -0.1 1,527,753 - EX28DRAFT_1513 0.74 -0.9 1,527,753 - EX28DRAFT_1513 0.74 -0.1 1,527,753 - EX28DRAFT_1513 0.74 +0.8 1,527,849 + EX28DRAFT_1513 0.84 -0.7 1,527,849 + EX28DRAFT_1513 0.84 +0.2 1,527,881 + EX28DRAFT_1513 0.87 +0.8 1,527,884 - EX28DRAFT_1513 0.87 -0.3
Or see this region's nucleotide sequence