Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1395 and EX28DRAFT_1396 are separated by 337 nucleotides EX28DRAFT_1396 and EX28DRAFT_1397 are separated by 64 nucleotides EX28DRAFT_1397 and EX28DRAFT_1398 are separated by 267 nucleotides
EX28DRAFT_1395: EX28DRAFT_1395 - Putative NADPH-quinone reductase (modulator of drug activity B), at 1,406,658 to 1,407,257
_1395
EX28DRAFT_1396: EX28DRAFT_1396 - Amidases related to nicotinamidase, at 1,407,595 to 1,408,134
_1396
EX28DRAFT_1397: EX28DRAFT_1397 - cupin fold metalloprotein, WbuC family, at 1,408,199 to 1,408,675
_1397
EX28DRAFT_1398: EX28DRAFT_1398 - hypothetical protein, at 1,408,943 to 1,409,413
_1398
Position (kb)
1407
1408
1409 Strain fitness (log2 ratio)
-1
0
1 at 1406.678 kb on + strand at 1406.678 kb on + strand at 1406.745 kb on - strand, within EX28DRAFT_1395 at 1406.771 kb on + strand, within EX28DRAFT_1395 at 1406.842 kb on + strand, within EX28DRAFT_1395 at 1406.843 kb on - strand, within EX28DRAFT_1395 at 1406.845 kb on - strand, within EX28DRAFT_1395 at 1406.875 kb on + strand, within EX28DRAFT_1395 at 1406.877 kb on - strand, within EX28DRAFT_1395 at 1407.004 kb on - strand, within EX28DRAFT_1395 at 1407.006 kb on - strand, within EX28DRAFT_1395 at 1407.006 kb on - strand, within EX28DRAFT_1395 at 1407.041 kb on - strand, within EX28DRAFT_1395 at 1407.109 kb on - strand, within EX28DRAFT_1395 at 1407.189 kb on + strand, within EX28DRAFT_1395 at 1407.251 kb on + strand at 1407.369 kb on + strand at 1407.370 kb on - strand at 1407.379 kb on + strand at 1407.385 kb on + strand at 1407.386 kb on - strand at 1407.386 kb on - strand at 1407.393 kb on + strand at 1407.393 kb on + strand at 1407.404 kb on - strand at 1407.406 kb on - strand at 1407.417 kb on + strand at 1407.438 kb on - strand at 1407.513 kb on - strand at 1407.513 kb on - strand at 1407.557 kb on + strand at 1407.557 kb on + strand at 1407.558 kb on - strand at 1407.558 kb on - strand at 1407.617 kb on + strand at 1407.621 kb on + strand at 1408.012 kb on - strand, within EX28DRAFT_1396 at 1408.120 kb on - strand at 1408.422 kb on - strand, within EX28DRAFT_1397 at 1408.422 kb on - strand, within EX28DRAFT_1397 at 1408.533 kb on + strand, within EX28DRAFT_1397 at 1408.533 kb on + strand, within EX28DRAFT_1397 at 1408.533 kb on + strand, within EX28DRAFT_1397 at 1408.534 kb on - strand, within EX28DRAFT_1397 at 1408.534 kb on - strand, within EX28DRAFT_1397 at 1408.534 kb on - strand, within EX28DRAFT_1397 at 1408.534 kb on - strand, within EX28DRAFT_1397 at 1408.537 kb on + strand, within EX28DRAFT_1397 at 1408.592 kb on + strand, within EX28DRAFT_1397 at 1408.593 kb on - strand, within EX28DRAFT_1397 at 1408.593 kb on - strand, within EX28DRAFT_1397 at 1408.664 kb on - strand at 1408.677 kb on + strand at 1408.677 kb on + strand at 1408.677 kb on + strand at 1408.677 kb on + strand at 1408.678 kb on - strand at 1408.731 kb on + strand at 1408.731 kb on + strand at 1408.731 kb on + strand at 1408.732 kb on - strand at 1408.827 kb on - strand at 1408.968 kb on + strand at 1409.038 kb on + strand, within EX28DRAFT_1398
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,406,678 + -0.2 1,406,678 + -0.9 1,406,745 - EX28DRAFT_1395 0.14 -0.3 1,406,771 + EX28DRAFT_1395 0.19 +1.3 1,406,842 + EX28DRAFT_1395 0.31 +0.0 1,406,843 - EX28DRAFT_1395 0.31 -0.3 1,406,845 - EX28DRAFT_1395 0.31 +0.1 1,406,875 + EX28DRAFT_1395 0.36 -0.2 1,406,877 - EX28DRAFT_1395 0.36 -0.7 1,407,004 - EX28DRAFT_1395 0.58 +0.1 1,407,006 - EX28DRAFT_1395 0.58 +0.3 1,407,006 - EX28DRAFT_1395 0.58 +0.6 1,407,041 - EX28DRAFT_1395 0.64 -0.9 1,407,109 - EX28DRAFT_1395 0.75 -0.0 1,407,189 + EX28DRAFT_1395 0.89 +0.4 1,407,251 + +0.0 1,407,369 + -0.7 1,407,370 - -0.3 1,407,379 + +0.6 1,407,385 + +0.2 1,407,386 - +0.1 1,407,386 - -0.2 1,407,393 + -0.2 1,407,393 + -0.1 1,407,404 - -0.5 1,407,406 - -0.1 1,407,417 + -1.1 1,407,438 - -0.4 1,407,513 - +0.8 1,407,513 - -1.0 1,407,557 + -0.3 1,407,557 + +0.6 1,407,558 - -0.1 1,407,558 - +0.5 1,407,617 + -0.0 1,407,621 + +0.0 1,408,012 - EX28DRAFT_1396 0.77 -0.8 1,408,120 - +0.3 1,408,422 - EX28DRAFT_1397 0.47 +0.1 1,408,422 - EX28DRAFT_1397 0.47 +0.2 1,408,533 + EX28DRAFT_1397 0.70 +0.5 1,408,533 + EX28DRAFT_1397 0.70 -0.1 1,408,533 + EX28DRAFT_1397 0.70 +0.0 1,408,534 - EX28DRAFT_1397 0.70 -0.4 1,408,534 - EX28DRAFT_1397 0.70 +1.3 1,408,534 - EX28DRAFT_1397 0.70 +0.1 1,408,534 - EX28DRAFT_1397 0.70 -0.2 1,408,537 + EX28DRAFT_1397 0.71 -0.1 1,408,592 + EX28DRAFT_1397 0.82 +0.5 1,408,593 - EX28DRAFT_1397 0.83 +1.5 1,408,593 - EX28DRAFT_1397 0.83 +1.1 1,408,664 - -0.3 1,408,677 + -1.1 1,408,677 + -0.4 1,408,677 + -0.3 1,408,677 + +0.5 1,408,678 - +0.9 1,408,731 + +0.1 1,408,731 + -0.0 1,408,731 + -0.0 1,408,732 - -0.3 1,408,827 - +0.3 1,408,968 + +0.1 1,409,038 + EX28DRAFT_1398 0.20 +0.1
Or see this region's nucleotide sequence