Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1363 and EX28DRAFT_1364 are separated by 23 nucleotides EX28DRAFT_1364 and EX28DRAFT_1365 are separated by 5 nucleotides
EX28DRAFT_1363: EX28DRAFT_1363 - Domain of unknown function (DUF1852), at 1,381,177 to 1,382,151
_1363
EX28DRAFT_1364: EX28DRAFT_1364 - Methionine synthase II (cobalamin-independent), at 1,382,175 to 1,383,203
_1364
EX28DRAFT_1365: EX28DRAFT_1365 - Transcriptional regulator, at 1,383,209 to 1,384,141
_1365
Position (kb)
1382
1383
1384 Strain fitness (log2 ratio)
-1
0
1 at 1381.195 kb on + strand at 1381.196 kb on - strand at 1381.196 kb on - strand at 1381.196 kb on - strand at 1381.196 kb on - strand at 1381.197 kb on + strand at 1381.197 kb on + strand at 1381.197 kb on + strand at 1381.228 kb on + strand at 1381.228 kb on + strand at 1381.311 kb on + strand, within EX28DRAFT_1363 at 1381.513 kb on - strand, within EX28DRAFT_1363 at 1381.525 kb on + strand, within EX28DRAFT_1363 at 1381.789 kb on + strand, within EX28DRAFT_1363 at 1381.985 kb on - strand, within EX28DRAFT_1363 at 1382.036 kb on - strand, within EX28DRAFT_1363 at 1382.092 kb on + strand at 1382.093 kb on - strand at 1382.140 kb on + strand at 1382.140 kb on + strand at 1382.141 kb on - strand at 1382.141 kb on - strand at 1382.141 kb on - strand at 1382.141 kb on - strand at 1382.150 kb on - strand at 1382.171 kb on + strand at 1382.171 kb on + strand at 1382.171 kb on + strand at 1382.172 kb on - strand at 1382.393 kb on + strand, within EX28DRAFT_1364 at 1382.394 kb on - strand, within EX28DRAFT_1364 at 1382.610 kb on + strand, within EX28DRAFT_1364 at 1382.613 kb on - strand, within EX28DRAFT_1364 at 1382.613 kb on - strand, within EX28DRAFT_1364 at 1382.674 kb on + strand, within EX28DRAFT_1364 at 1382.921 kb on + strand, within EX28DRAFT_1364 at 1382.921 kb on + strand, within EX28DRAFT_1364 at 1382.982 kb on - strand, within EX28DRAFT_1364 at 1383.059 kb on + strand, within EX28DRAFT_1364 at 1383.249 kb on + strand at 1383.249 kb on + strand at 1383.250 kb on - strand at 1383.250 kb on - strand at 1383.300 kb on + strand at 1383.300 kb on + strand at 1383.301 kb on - strand at 1383.355 kb on + strand, within EX28DRAFT_1365 at 1383.615 kb on + strand, within EX28DRAFT_1365 at 1383.758 kb on + strand, within EX28DRAFT_1365 at 1383.978 kb on + strand, within EX28DRAFT_1365 at 1383.979 kb on - strand, within EX28DRAFT_1365
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,381,195 + -0.6 1,381,196 - -0.6 1,381,196 - -0.1 1,381,196 - -0.8 1,381,196 - +0.7 1,381,197 + -0.2 1,381,197 + +0.6 1,381,197 + -0.8 1,381,228 + -1.5 1,381,228 + -0.7 1,381,311 + EX28DRAFT_1363 0.14 -0.7 1,381,513 - EX28DRAFT_1363 0.34 -0.7 1,381,525 + EX28DRAFT_1363 0.36 -0.5 1,381,789 + EX28DRAFT_1363 0.63 -1.2 1,381,985 - EX28DRAFT_1363 0.83 +1.0 1,382,036 - EX28DRAFT_1363 0.88 -0.0 1,382,092 + -0.6 1,382,093 - -0.2 1,382,140 + +0.3 1,382,140 + +0.5 1,382,141 - -0.4 1,382,141 - -0.4 1,382,141 - -0.9 1,382,141 - -0.4 1,382,150 - -0.5 1,382,171 + +0.4 1,382,171 + -0.3 1,382,171 + -0.6 1,382,172 - -1.5 1,382,393 + EX28DRAFT_1364 0.21 -0.8 1,382,394 - EX28DRAFT_1364 0.21 +0.3 1,382,610 + EX28DRAFT_1364 0.42 -0.1 1,382,613 - EX28DRAFT_1364 0.43 -0.4 1,382,613 - EX28DRAFT_1364 0.43 -0.6 1,382,674 + EX28DRAFT_1364 0.48 -0.8 1,382,921 + EX28DRAFT_1364 0.72 -0.8 1,382,921 + EX28DRAFT_1364 0.72 +0.7 1,382,982 - EX28DRAFT_1364 0.78 -0.8 1,383,059 + EX28DRAFT_1364 0.86 -0.8 1,383,249 + -0.5 1,383,249 + +0.3 1,383,250 - -0.2 1,383,250 - -0.2 1,383,300 + -1.1 1,383,300 + +0.0 1,383,301 - -0.8 1,383,355 + EX28DRAFT_1365 0.16 -0.2 1,383,615 + EX28DRAFT_1365 0.44 -0.2 1,383,758 + EX28DRAFT_1365 0.59 +0.3 1,383,978 + EX28DRAFT_1365 0.82 +0.2 1,383,979 - EX28DRAFT_1365 0.83 +0.6
Or see this region's nucleotide sequence