Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1264 and EX28DRAFT_1265 are separated by 169 nucleotides EX28DRAFT_1265 and EX28DRAFT_1266 are separated by 169 nucleotides EX28DRAFT_1266 and EX28DRAFT_1267 are separated by 136 nucleotides
EX28DRAFT_1264: EX28DRAFT_1264 - Predicted acyltransferases, at 1,280,989 to 1,282,077
_1264
EX28DRAFT_1265: EX28DRAFT_1265 - ORF6N domain, at 1,282,247 to 1,282,936
_1265
EX28DRAFT_1266: EX28DRAFT_1266 - hypothetical protein, at 1,283,106 to 1,283,414
_1266
EX28DRAFT_1267: EX28DRAFT_1267 - Predicted acyltransferases, at 1,283,551 to 1,284,624
_1267
Position (kb)
1282
1283 Strain fitness (log2 ratio)
-2
-1
0
1 at 1281.266 kb on - strand, within EX28DRAFT_1264 at 1281.267 kb on + strand, within EX28DRAFT_1264 at 1281.269 kb on + strand, within EX28DRAFT_1264 at 1281.294 kb on - strand, within EX28DRAFT_1264 at 1281.358 kb on + strand, within EX28DRAFT_1264 at 1281.922 kb on - strand, within EX28DRAFT_1264 at 1281.923 kb on + strand, within EX28DRAFT_1264 at 1281.974 kb on + strand at 1281.978 kb on - strand at 1281.997 kb on - strand at 1282.015 kb on + strand at 1282.025 kb on + strand at 1282.085 kb on - strand at 1282.085 kb on - strand at 1282.119 kb on + strand at 1282.176 kb on + strand at 1282.178 kb on + strand at 1282.179 kb on - strand at 1282.179 kb on - strand at 1282.203 kb on + strand at 1282.204 kb on - strand at 1282.373 kb on - strand, within EX28DRAFT_1265 at 1282.373 kb on - strand, within EX28DRAFT_1265 at 1282.511 kb on - strand, within EX28DRAFT_1265 at 1282.623 kb on + strand, within EX28DRAFT_1265 at 1282.624 kb on - strand, within EX28DRAFT_1265 at 1282.624 kb on - strand, within EX28DRAFT_1265 at 1282.627 kb on + strand, within EX28DRAFT_1265 at 1282.627 kb on + strand, within EX28DRAFT_1265 at 1282.628 kb on - strand, within EX28DRAFT_1265 at 1282.717 kb on + strand, within EX28DRAFT_1265 at 1282.717 kb on + strand, within EX28DRAFT_1265 at 1282.718 kb on - strand, within EX28DRAFT_1265 at 1282.793 kb on - strand, within EX28DRAFT_1265 at 1282.959 kb on + strand at 1283.011 kb on - strand at 1283.021 kb on - strand at 1283.076 kb on - strand at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.239 kb on + strand, within EX28DRAFT_1266 at 1283.320 kb on + strand, within EX28DRAFT_1266 at 1283.321 kb on - strand, within EX28DRAFT_1266 at 1283.452 kb on + strand at 1283.464 kb on + strand at 1283.468 kb on + strand at 1283.469 kb on - strand at 1283.509 kb on + strand at 1283.509 kb on + strand at 1283.509 kb on + strand at 1283.510 kb on - strand at 1283.572 kb on + strand at 1283.605 kb on + strand at 1283.606 kb on - strand at 1283.648 kb on + strand at 1283.701 kb on - strand, within EX28DRAFT_1267 at 1283.710 kb on + strand, within EX28DRAFT_1267 at 1283.731 kb on + strand, within EX28DRAFT_1267 at 1283.731 kb on + strand, within EX28DRAFT_1267 at 1283.732 kb on - strand, within EX28DRAFT_1267 at 1283.733 kb on + strand, within EX28DRAFT_1267 at 1283.742 kb on + strand, within EX28DRAFT_1267 at 1283.742 kb on + strand, within EX28DRAFT_1267 at 1283.806 kb on + strand, within EX28DRAFT_1267 at 1283.806 kb on + strand, within EX28DRAFT_1267 at 1283.806 kb on + strand, within EX28DRAFT_1267 at 1283.807 kb on - strand, within EX28DRAFT_1267 at 1283.807 kb on - strand, within EX28DRAFT_1267 at 1283.807 kb on - strand, within EX28DRAFT_1267 at 1283.838 kb on - strand, within EX28DRAFT_1267 at 1283.838 kb on - strand, within EX28DRAFT_1267 at 1283.862 kb on + strand, within EX28DRAFT_1267 at 1283.862 kb on + strand, within EX28DRAFT_1267 at 1283.863 kb on - strand, within EX28DRAFT_1267 at 1283.863 kb on - strand, within EX28DRAFT_1267 at 1283.863 kb on - strand, within EX28DRAFT_1267 at 1283.891 kb on - strand, within EX28DRAFT_1267 at 1283.891 kb on - strand, within EX28DRAFT_1267 at 1283.891 kb on - strand, within EX28DRAFT_1267
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,281,266 - EX28DRAFT_1264 0.25 -0.2 1,281,267 + EX28DRAFT_1264 0.26 +0.3 1,281,269 + EX28DRAFT_1264 0.26 +0.6 1,281,294 - EX28DRAFT_1264 0.28 +0.2 1,281,358 + EX28DRAFT_1264 0.34 +0.0 1,281,922 - EX28DRAFT_1264 0.86 -0.4 1,281,923 + EX28DRAFT_1264 0.86 -0.4 1,281,974 + +0.1 1,281,978 - +0.1 1,281,997 - +0.6 1,282,015 + +0.3 1,282,025 + +0.6 1,282,085 - -0.1 1,282,085 - +0.5 1,282,119 + -0.6 1,282,176 + -1.0 1,282,178 + -0.5 1,282,179 - +0.0 1,282,179 - +0.3 1,282,203 + -1.9 1,282,204 - +0.2 1,282,373 - EX28DRAFT_1265 0.18 -0.3 1,282,373 - EX28DRAFT_1265 0.18 +0.3 1,282,511 - EX28DRAFT_1265 0.38 -0.4 1,282,623 + EX28DRAFT_1265 0.54 +0.2 1,282,624 - EX28DRAFT_1265 0.55 -1.5 1,282,624 - EX28DRAFT_1265 0.55 -0.0 1,282,627 + EX28DRAFT_1265 0.55 +0.9 1,282,627 + EX28DRAFT_1265 0.55 -0.1 1,282,628 - EX28DRAFT_1265 0.55 +1.6 1,282,717 + EX28DRAFT_1265 0.68 +0.6 1,282,717 + EX28DRAFT_1265 0.68 -0.4 1,282,718 - EX28DRAFT_1265 0.68 +0.6 1,282,793 - EX28DRAFT_1265 0.79 +0.6 1,282,959 + +0.1 1,283,011 - +0.0 1,283,021 - +0.1 1,283,076 - -0.6 1,283,148 - EX28DRAFT_1266 0.14 -0.1 1,283,148 - EX28DRAFT_1266 0.14 -0.4 1,283,148 - EX28DRAFT_1266 0.14 -0.9 1,283,148 - EX28DRAFT_1266 0.14 +0.1 1,283,239 + EX28DRAFT_1266 0.43 +0.1 1,283,320 + EX28DRAFT_1266 0.69 -0.4 1,283,321 - EX28DRAFT_1266 0.70 -1.1 1,283,452 + +0.3 1,283,464 + -0.1 1,283,468 + +0.5 1,283,469 - +0.8 1,283,509 + -0.6 1,283,509 + -0.8 1,283,509 + +0.4 1,283,510 - -0.3 1,283,572 + +1.1 1,283,605 + +0.4 1,283,606 - -0.3 1,283,648 + -0.9 1,283,701 - EX28DRAFT_1267 0.14 -0.6 1,283,710 + EX28DRAFT_1267 0.15 -0.4 1,283,731 + EX28DRAFT_1267 0.17 -0.3 1,283,731 + EX28DRAFT_1267 0.17 -0.2 1,283,732 - EX28DRAFT_1267 0.17 +0.7 1,283,733 + EX28DRAFT_1267 0.17 +0.8 1,283,742 + EX28DRAFT_1267 0.18 -0.2 1,283,742 + EX28DRAFT_1267 0.18 +0.1 1,283,806 + EX28DRAFT_1267 0.24 +0.6 1,283,806 + EX28DRAFT_1267 0.24 -0.3 1,283,806 + EX28DRAFT_1267 0.24 +0.3 1,283,807 - EX28DRAFT_1267 0.24 -0.3 1,283,807 - EX28DRAFT_1267 0.24 -0.6 1,283,807 - EX28DRAFT_1267 0.24 +0.2 1,283,838 - EX28DRAFT_1267 0.27 -0.2 1,283,838 - EX28DRAFT_1267 0.27 -0.5 1,283,862 + EX28DRAFT_1267 0.29 -0.3 1,283,862 + EX28DRAFT_1267 0.29 +0.1 1,283,863 - EX28DRAFT_1267 0.29 +1.0 1,283,863 - EX28DRAFT_1267 0.29 +0.5 1,283,863 - EX28DRAFT_1267 0.29 +0.3 1,283,891 - EX28DRAFT_1267 0.32 +0.3 1,283,891 - EX28DRAFT_1267 0.32 +1.1 1,283,891 - EX28DRAFT_1267 0.32 +0.2
Or see this region's nucleotide sequence