Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1256 and EX28DRAFT_1257 are separated by 160 nucleotides EX28DRAFT_1257 and EX28DRAFT_1258 are separated by 28 nucleotides EX28DRAFT_1258 and EX28DRAFT_1259 are separated by 345 nucleotides
EX28DRAFT_1256: EX28DRAFT_1256 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 1,273,657 to 1,275,348
_1256
EX28DRAFT_1257: EX28DRAFT_1257 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 1,275,509 to 1,276,630
_1257
EX28DRAFT_1258: EX28DRAFT_1258 - Uncharacterized protein conserved in bacteria, at 1,276,659 to 1,276,934
_1258
EX28DRAFT_1259: EX28DRAFT_1259 - Uncharacterized conserved protein, at 1,277,280 to 1,277,948
_1259
Position (kb)
1275
1276
1277 Strain fitness (log2 ratio)
-1
0
1 at 1274.628 kb on + strand, within EX28DRAFT_1256 at 1274.659 kb on + strand, within EX28DRAFT_1256 at 1274.868 kb on + strand, within EX28DRAFT_1256 at 1274.927 kb on + strand, within EX28DRAFT_1256 at 1274.927 kb on + strand, within EX28DRAFT_1256 at 1274.927 kb on + strand, within EX28DRAFT_1256 at 1274.928 kb on - strand, within EX28DRAFT_1256 at 1274.928 kb on - strand, within EX28DRAFT_1256 at 1274.997 kb on + strand, within EX28DRAFT_1256 at 1274.997 kb on + strand, within EX28DRAFT_1256 at 1274.997 kb on + strand, within EX28DRAFT_1256 at 1275.337 kb on - strand at 1275.337 kb on - strand at 1275.366 kb on + strand at 1275.366 kb on + strand at 1275.370 kb on + strand at 1275.370 kb on + strand at 1275.370 kb on + strand at 1275.370 kb on + strand at 1275.370 kb on + strand at 1275.370 kb on + strand at 1275.370 kb on + strand at 1275.371 kb on - strand at 1275.371 kb on - strand at 1275.394 kb on + strand at 1275.398 kb on + strand at 1275.421 kb on + strand at 1275.427 kb on - strand at 1275.510 kb on + strand at 1275.536 kb on - strand at 1275.740 kb on - strand, within EX28DRAFT_1257 at 1275.773 kb on - strand, within EX28DRAFT_1257 at 1275.773 kb on - strand, within EX28DRAFT_1257 at 1275.988 kb on + strand, within EX28DRAFT_1257 at 1275.988 kb on + strand, within EX28DRAFT_1257 at 1276.198 kb on - strand, within EX28DRAFT_1257 at 1276.198 kb on - strand, within EX28DRAFT_1257 at 1276.224 kb on + strand, within EX28DRAFT_1257 at 1276.224 kb on + strand, within EX28DRAFT_1257 at 1276.225 kb on - strand, within EX28DRAFT_1257 at 1276.225 kb on - strand, within EX28DRAFT_1257 at 1276.230 kb on + strand, within EX28DRAFT_1257 at 1276.230 kb on + strand, within EX28DRAFT_1257 at 1276.230 kb on + strand, within EX28DRAFT_1257 at 1276.248 kb on + strand, within EX28DRAFT_1257 at 1276.249 kb on - strand, within EX28DRAFT_1257 at 1276.342 kb on + strand, within EX28DRAFT_1257 at 1276.343 kb on - strand, within EX28DRAFT_1257 at 1276.343 kb on - strand, within EX28DRAFT_1257 at 1276.365 kb on + strand, within EX28DRAFT_1257 at 1276.376 kb on - strand, within EX28DRAFT_1257 at 1276.493 kb on - strand, within EX28DRAFT_1257 at 1276.661 kb on - strand at 1276.665 kb on + strand at 1276.670 kb on - strand at 1276.965 kb on + strand at 1276.966 kb on - strand at 1277.030 kb on - strand at 1277.034 kb on - strand at 1277.052 kb on + strand at 1277.053 kb on - strand at 1277.053 kb on - strand at 1277.053 kb on - strand at 1277.169 kb on + strand at 1277.170 kb on - strand at 1277.188 kb on + strand at 1277.210 kb on - strand at 1277.210 kb on - strand at 1277.216 kb on + strand at 1277.235 kb on + strand at 1277.235 kb on + strand at 1277.236 kb on - strand at 1277.240 kb on - strand at 1277.240 kb on - strand at 1277.240 kb on - strand at 1277.249 kb on - strand at 1277.250 kb on + strand at 1277.250 kb on + strand at 1277.279 kb on + strand at 1277.279 kb on + strand at 1277.279 kb on + strand at 1277.320 kb on - strand at 1277.328 kb on + strand at 1277.328 kb on + strand at 1277.361 kb on + strand, within EX28DRAFT_1259 at 1277.466 kb on + strand, within EX28DRAFT_1259 at 1277.467 kb on - strand, within EX28DRAFT_1259 at 1277.486 kb on + strand, within EX28DRAFT_1259 at 1277.487 kb on - strand, within EX28DRAFT_1259
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,274,628 + EX28DRAFT_1256 0.57 +0.1 1,274,659 + EX28DRAFT_1256 0.59 +0.3 1,274,868 + EX28DRAFT_1256 0.72 +0.1 1,274,927 + EX28DRAFT_1256 0.75 -0.4 1,274,927 + EX28DRAFT_1256 0.75 -0.4 1,274,927 + EX28DRAFT_1256 0.75 +0.3 1,274,928 - EX28DRAFT_1256 0.75 +0.0 1,274,928 - EX28DRAFT_1256 0.75 -0.1 1,274,997 + EX28DRAFT_1256 0.79 +0.3 1,274,997 + EX28DRAFT_1256 0.79 +0.0 1,274,997 + EX28DRAFT_1256 0.79 -0.6 1,275,337 - +0.6 1,275,337 - +0.0 1,275,366 + +0.1 1,275,366 + +0.1 1,275,370 + +0.1 1,275,370 + -0.7 1,275,370 + +0.2 1,275,370 + +0.3 1,275,370 + +0.5 1,275,370 + -0.0 1,275,370 + +0.3 1,275,371 - +0.1 1,275,371 - -1.1 1,275,394 + -0.1 1,275,398 + -0.1 1,275,421 + -0.6 1,275,427 - +0.4 1,275,510 + +0.1 1,275,536 - -0.1 1,275,740 - EX28DRAFT_1257 0.21 +0.5 1,275,773 - EX28DRAFT_1257 0.24 +0.5 1,275,773 - EX28DRAFT_1257 0.24 +0.7 1,275,988 + EX28DRAFT_1257 0.43 +0.8 1,275,988 + EX28DRAFT_1257 0.43 +0.1 1,276,198 - EX28DRAFT_1257 0.61 +0.3 1,276,198 - EX28DRAFT_1257 0.61 +0.3 1,276,224 + EX28DRAFT_1257 0.64 +0.1 1,276,224 + EX28DRAFT_1257 0.64 -0.3 1,276,225 - EX28DRAFT_1257 0.64 -0.9 1,276,225 - EX28DRAFT_1257 0.64 -0.6 1,276,230 + EX28DRAFT_1257 0.64 +0.9 1,276,230 + EX28DRAFT_1257 0.64 -0.2 1,276,230 + EX28DRAFT_1257 0.64 +0.1 1,276,248 + EX28DRAFT_1257 0.66 +0.6 1,276,249 - EX28DRAFT_1257 0.66 -0.2 1,276,342 + EX28DRAFT_1257 0.74 +0.5 1,276,343 - EX28DRAFT_1257 0.74 +0.8 1,276,343 - EX28DRAFT_1257 0.74 -0.0 1,276,365 + EX28DRAFT_1257 0.76 +0.4 1,276,376 - EX28DRAFT_1257 0.77 +0.3 1,276,493 - EX28DRAFT_1257 0.88 -0.1 1,276,661 - -0.9 1,276,665 + +0.2 1,276,670 - -0.4 1,276,965 + +0.1 1,276,966 - -0.6 1,277,030 - -0.2 1,277,034 - -1.1 1,277,052 + -0.6 1,277,053 - -0.9 1,277,053 - -0.4 1,277,053 - +0.1 1,277,169 + +0.1 1,277,170 - +0.3 1,277,188 + -0.4 1,277,210 - -0.0 1,277,210 - +0.2 1,277,216 + -0.7 1,277,235 + +0.4 1,277,235 + -0.0 1,277,236 - -0.1 1,277,240 - +0.1 1,277,240 - +0.1 1,277,240 - +0.2 1,277,249 - +0.0 1,277,250 + -0.2 1,277,250 + -0.5 1,277,279 + -0.1 1,277,279 + +0.4 1,277,279 + -0.2 1,277,320 - -0.5 1,277,328 + +0.1 1,277,328 + +0.3 1,277,361 + EX28DRAFT_1259 0.12 +0.5 1,277,466 + EX28DRAFT_1259 0.28 -0.0 1,277,467 - EX28DRAFT_1259 0.28 +0.3 1,277,486 + EX28DRAFT_1259 0.31 -0.3 1,277,487 - EX28DRAFT_1259 0.31 -0.1
Or see this region's nucleotide sequence