Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0651 and EX28DRAFT_0652 are separated by 787 nucleotides EX28DRAFT_0652 and EX28DRAFT_0653 are separated by 71 nucleotides
EX28DRAFT_0651: EX28DRAFT_0651 - Ferritin-like protein, at 644,667 to 645,170
_0651
EX28DRAFT_0652: EX28DRAFT_0652 - ABC-type sugar transport system, periplasmic component, at 645,958 to 646,947
_0652
EX28DRAFT_0653: EX28DRAFT_0653 - ABC-type sugar transport system, ATPase component, at 647,019 to 648,533
_0653
Position (kb) 645
646
647 Strain fitness (log2 ratio) -1
0
1
2 at 645.011 kb on + strand, within EX28DRAFT_0651 at 645.091 kb on - strand, within EX28DRAFT_0651 at 645.116 kb on - strand, within EX28DRAFT_0651 at 645.170 kb on + strand at 645.171 kb on - strand at 645.176 kb on + strand at 645.305 kb on - strand at 645.308 kb on + strand at 645.309 kb on - strand at 645.315 kb on - strand at 645.359 kb on - strand at 645.363 kb on + strand at 645.382 kb on + strand at 645.396 kb on - strand at 645.606 kb on + strand at 645.606 kb on + strand at 645.695 kb on + strand at 645.749 kb on + strand at 645.749 kb on + strand at 645.771 kb on - strand at 645.970 kb on - strand at 646.212 kb on + strand, within EX28DRAFT_0652 at 646.390 kb on + strand, within EX28DRAFT_0652 at 646.390 kb on + strand, within EX28DRAFT_0652 at 646.390 kb on + strand, within EX28DRAFT_0652 at 646.391 kb on - strand, within EX28DRAFT_0652 at 646.391 kb on - strand, within EX28DRAFT_0652 at 646.534 kb on + strand, within EX28DRAFT_0652 at 646.534 kb on + strand, within EX28DRAFT_0652 at 646.534 kb on + strand, within EX28DRAFT_0652 at 646.535 kb on - strand, within EX28DRAFT_0652 at 646.535 kb on - strand, within EX28DRAFT_0652 at 646.591 kb on - strand, within EX28DRAFT_0652 at 646.591 kb on - strand, within EX28DRAFT_0652 at 646.771 kb on + strand, within EX28DRAFT_0652 at 646.828 kb on + strand, within EX28DRAFT_0652 at 646.866 kb on + strand at 646.945 kb on + strand at 646.945 kb on + strand at 646.946 kb on - strand at 646.949 kb on - strand at 646.949 kb on - strand at 646.949 kb on - strand at 646.991 kb on + strand at 646.991 kb on + strand at 646.992 kb on - strand at 647.037 kb on + strand at 647.109 kb on + strand at 647.110 kb on - strand at 647.187 kb on + strand, within EX28DRAFT_0653 at 647.187 kb on + strand, within EX28DRAFT_0653 at 647.188 kb on - strand, within EX28DRAFT_0653 at 647.188 kb on - strand, within EX28DRAFT_0653 at 647.195 kb on + strand, within EX28DRAFT_0653 at 647.196 kb on - strand, within EX28DRAFT_0653 at 647.328 kb on + strand, within EX28DRAFT_0653 at 647.328 kb on + strand, within EX28DRAFT_0653 at 647.329 kb on - strand, within EX28DRAFT_0653 at 647.329 kb on - strand, within EX28DRAFT_0653 at 647.333 kb on - strand, within EX28DRAFT_0653 at 647.333 kb on - strand, within EX28DRAFT_0653 at 647.378 kb on + strand, within EX28DRAFT_0653 at 647.378 kb on + strand, within EX28DRAFT_0653 at 647.378 kb on + strand, within EX28DRAFT_0653 at 647.378 kb on + strand, within EX28DRAFT_0653 at 647.379 kb on - strand, within EX28DRAFT_0653 at 647.379 kb on - strand, within EX28DRAFT_0653 at 647.379 kb on - strand, within EX28DRAFT_0653 at 647.382 kb on + strand, within EX28DRAFT_0653 at 647.383 kb on - strand, within EX28DRAFT_0653 at 647.402 kb on + strand, within EX28DRAFT_0653 at 647.402 kb on + strand, within EX28DRAFT_0653 at 647.635 kb on + strand, within EX28DRAFT_0653 at 647.636 kb on - strand, within EX28DRAFT_0653 at 647.636 kb on - strand, within EX28DRAFT_0653 at 647.763 kb on + strand, within EX28DRAFT_0653 at 647.764 kb on - strand, within EX28DRAFT_0653
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 645,011 + EX28DRAFT_0651 0.68 +0.7 645,091 - EX28DRAFT_0651 0.84 +0.3 645,116 - EX28DRAFT_0651 0.89 -0.4 645,170 + +1.1 645,171 - -0.3 645,176 + -0.6 645,305 - +0.4 645,308 + +0.4 645,309 - -0.0 645,315 - -0.4 645,359 - +0.3 645,363 + +0.2 645,382 + +0.5 645,396 - +0.0 645,606 + +2.1 645,606 + +0.1 645,695 + +0.5 645,749 + -0.5 645,749 + +0.3 645,771 - -0.6 645,970 - +0.0 646,212 + EX28DRAFT_0652 0.26 -0.2 646,390 + EX28DRAFT_0652 0.44 -0.2 646,390 + EX28DRAFT_0652 0.44 +0.0 646,390 + EX28DRAFT_0652 0.44 -0.3 646,391 - EX28DRAFT_0652 0.44 +0.2 646,391 - EX28DRAFT_0652 0.44 -0.3 646,534 + EX28DRAFT_0652 0.58 +0.0 646,534 + EX28DRAFT_0652 0.58 -0.7 646,534 + EX28DRAFT_0652 0.58 -0.5 646,535 - EX28DRAFT_0652 0.58 -0.4 646,535 - EX28DRAFT_0652 0.58 -0.6 646,591 - EX28DRAFT_0652 0.64 +0.0 646,591 - EX28DRAFT_0652 0.64 -0.7 646,771 + EX28DRAFT_0652 0.82 +0.1 646,828 + EX28DRAFT_0652 0.88 +0.2 646,866 + +0.2 646,945 + -0.3 646,945 + +0.3 646,946 - +0.1 646,949 - -0.5 646,949 - +0.0 646,949 - -0.1 646,991 + +0.8 646,991 + -0.5 646,992 - -0.4 647,037 + +0.9 647,109 + +0.5 647,110 - -0.1 647,187 + EX28DRAFT_0653 0.11 +0.2 647,187 + EX28DRAFT_0653 0.11 -1.3 647,188 - EX28DRAFT_0653 0.11 +0.3 647,188 - EX28DRAFT_0653 0.11 -0.3 647,195 + EX28DRAFT_0653 0.12 +0.6 647,196 - EX28DRAFT_0653 0.12 -0.0 647,328 + EX28DRAFT_0653 0.20 +0.4 647,328 + EX28DRAFT_0653 0.20 -0.4 647,329 - EX28DRAFT_0653 0.20 +0.0 647,329 - EX28DRAFT_0653 0.20 -0.1 647,333 - EX28DRAFT_0653 0.21 +0.5 647,333 - EX28DRAFT_0653 0.21 -0.4 647,378 + EX28DRAFT_0653 0.24 -0.6 647,378 + EX28DRAFT_0653 0.24 +0.0 647,378 + EX28DRAFT_0653 0.24 +0.3 647,378 + EX28DRAFT_0653 0.24 +0.5 647,379 - EX28DRAFT_0653 0.24 -0.1 647,379 - EX28DRAFT_0653 0.24 +0.2 647,379 - EX28DRAFT_0653 0.24 +0.2 647,382 + EX28DRAFT_0653 0.24 -0.3 647,383 - EX28DRAFT_0653 0.24 +0.7 647,402 + EX28DRAFT_0653 0.25 -0.1 647,402 + EX28DRAFT_0653 0.25 -0.1 647,635 + EX28DRAFT_0653 0.41 +0.2 647,636 - EX28DRAFT_0653 0.41 +0.1 647,636 - EX28DRAFT_0653 0.41 -0.3 647,763 + EX28DRAFT_0653 0.49 +0.1 647,764 - EX28DRAFT_0653 0.49 -0.0
Or see this region's nucleotide sequence