Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0488 and EX28DRAFT_0489 are separated by 91 nucleotides EX28DRAFT_0489 and EX28DRAFT_0490 are separated by 22 nucleotides EX28DRAFT_0490 and EX28DRAFT_0491 are separated by 109 nucleotides
EX28DRAFT_0488: EX28DRAFT_0488 - uridine kinase (EC 2.7.1.48), at 478,948 to 479,589
_0488
EX28DRAFT_0489: EX28DRAFT_0489 - deoxycytidine triphosphate deaminase, at 479,681 to 480,262
_0489
EX28DRAFT_0490: EX28DRAFT_0490 - Uncharacterized protein involved in outer membrane biogenesis, at 480,285 to 482,135
_0490
EX28DRAFT_0491: EX28DRAFT_0491 - Membrane protein TerC, possibly involved in tellurium resistance, at 482,245 to 483,828
_0491
Position (kb) 480
481
482
483 Strain fitness (log2 ratio) -2
-1
0
1 at 479.408 kb on + strand, within EX28DRAFT_0488 at 479.409 kb on - strand, within EX28DRAFT_0488 at 479.449 kb on + strand, within EX28DRAFT_0488 at 479.504 kb on - strand, within EX28DRAFT_0488 at 479.533 kb on - strand at 479.548 kb on - strand at 479.548 kb on - strand at 479.548 kb on - strand at 479.548 kb on - strand at 479.559 kb on - strand at 479.559 kb on - strand at 480.384 kb on + strand at 480.384 kb on + strand at 480.385 kb on - strand at 480.385 kb on - strand at 480.485 kb on + strand, within EX28DRAFT_0490 at 480.899 kb on + strand, within EX28DRAFT_0490 at 480.900 kb on - strand, within EX28DRAFT_0490 at 481.083 kb on - strand, within EX28DRAFT_0490 at 481.263 kb on - strand, within EX28DRAFT_0490 at 481.281 kb on + strand, within EX28DRAFT_0490 at 481.281 kb on + strand, within EX28DRAFT_0490 at 481.282 kb on - strand, within EX28DRAFT_0490 at 481.282 kb on - strand, within EX28DRAFT_0490 at 481.283 kb on + strand, within EX28DRAFT_0490 at 481.328 kb on + strand, within EX28DRAFT_0490 at 481.380 kb on - strand, within EX28DRAFT_0490 at 481.516 kb on + strand, within EX28DRAFT_0490 at 481.539 kb on - strand, within EX28DRAFT_0490 at 481.539 kb on - strand, within EX28DRAFT_0490 at 481.539 kb on - strand, within EX28DRAFT_0490 at 481.543 kb on - strand, within EX28DRAFT_0490 at 481.677 kb on - strand, within EX28DRAFT_0490 at 481.677 kb on - strand, within EX28DRAFT_0490 at 481.736 kb on + strand, within EX28DRAFT_0490 at 481.740 kb on + strand, within EX28DRAFT_0490 at 481.740 kb on + strand, within EX28DRAFT_0490 at 481.741 kb on - strand, within EX28DRAFT_0490 at 481.802 kb on + strand, within EX28DRAFT_0490 at 481.803 kb on - strand, within EX28DRAFT_0490 at 481.815 kb on - strand, within EX28DRAFT_0490 at 481.838 kb on - strand, within EX28DRAFT_0490 at 481.975 kb on + strand at 481.975 kb on + strand at 482.002 kb on - strand at 482.002 kb on - strand at 482.134 kb on - strand at 482.243 kb on - strand at 482.246 kb on + strand at 482.410 kb on - strand, within EX28DRAFT_0491 at 482.418 kb on - strand, within EX28DRAFT_0491 at 482.418 kb on - strand, within EX28DRAFT_0491 at 482.450 kb on + strand, within EX28DRAFT_0491 at 482.475 kb on + strand, within EX28DRAFT_0491 at 482.518 kb on - strand, within EX28DRAFT_0491 at 482.518 kb on - strand, within EX28DRAFT_0491 at 483.059 kb on - strand, within EX28DRAFT_0491 at 483.059 kb on - strand, within EX28DRAFT_0491 at 483.134 kb on - strand, within EX28DRAFT_0491
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 479,408 + EX28DRAFT_0488 0.72 +0.2 479,409 - EX28DRAFT_0488 0.72 -0.3 479,449 + EX28DRAFT_0488 0.78 -0.3 479,504 - EX28DRAFT_0488 0.87 -1.6 479,533 - -0.0 479,548 - -0.1 479,548 - +1.3 479,548 - -0.4 479,548 - +1.2 479,559 - -0.1 479,559 - -0.1 480,384 + +0.1 480,384 + -0.5 480,385 - +0.1 480,385 - -0.0 480,485 + EX28DRAFT_0490 0.11 +0.1 480,899 + EX28DRAFT_0490 0.33 -0.7 480,900 - EX28DRAFT_0490 0.33 -2.7 481,083 - EX28DRAFT_0490 0.43 -0.2 481,263 - EX28DRAFT_0490 0.53 -0.4 481,281 + EX28DRAFT_0490 0.54 -0.3 481,281 + EX28DRAFT_0490 0.54 -2.4 481,282 - EX28DRAFT_0490 0.54 +0.4 481,282 - EX28DRAFT_0490 0.54 +0.2 481,283 + EX28DRAFT_0490 0.54 -1.1 481,328 + EX28DRAFT_0490 0.56 +0.2 481,380 - EX28DRAFT_0490 0.59 -0.1 481,516 + EX28DRAFT_0490 0.67 -0.1 481,539 - EX28DRAFT_0490 0.68 +0.3 481,539 - EX28DRAFT_0490 0.68 -0.8 481,539 - EX28DRAFT_0490 0.68 -0.3 481,543 - EX28DRAFT_0490 0.68 +0.1 481,677 - EX28DRAFT_0490 0.75 -1.7 481,677 - EX28DRAFT_0490 0.75 -0.7 481,736 + EX28DRAFT_0490 0.78 +0.2 481,740 + EX28DRAFT_0490 0.79 +1.1 481,740 + EX28DRAFT_0490 0.79 +0.5 481,741 - EX28DRAFT_0490 0.79 -0.3 481,802 + EX28DRAFT_0490 0.82 -0.5 481,803 - EX28DRAFT_0490 0.82 -1.3 481,815 - EX28DRAFT_0490 0.83 +0.1 481,838 - EX28DRAFT_0490 0.84 +0.0 481,975 + +0.4 481,975 + +1.1 482,002 - +1.6 482,002 - -0.0 482,134 - +0.2 482,243 - +0.2 482,246 + +0.0 482,410 - EX28DRAFT_0491 0.10 +0.5 482,418 - EX28DRAFT_0491 0.11 -1.2 482,418 - EX28DRAFT_0491 0.11 +0.2 482,450 + EX28DRAFT_0491 0.13 -0.3 482,475 + EX28DRAFT_0491 0.15 +1.0 482,518 - EX28DRAFT_0491 0.17 -0.4 482,518 - EX28DRAFT_0491 0.17 +0.1 483,059 - EX28DRAFT_0491 0.51 +1.1 483,059 - EX28DRAFT_0491 0.51 +0.7 483,134 - EX28DRAFT_0491 0.56 -0.6
Or see this region's nucleotide sequence