Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0176 and EX28DRAFT_0177 overlap by 4 nucleotides EX28DRAFT_0177 and EX28DRAFT_0178 are separated by 18 nucleotides EX28DRAFT_0178 and EX28DRAFT_0179 are separated by 221 nucleotides
EX28DRAFT_0176: EX28DRAFT_0176 - Homeodomain-like domain, at 126,340 to 127,164
_0176
EX28DRAFT_0177: EX28DRAFT_0177 - arsenate reductase (glutaredoxin), at 127,161 to 127,517
_0177
EX28DRAFT_0178: EX28DRAFT_0178 - Putative Zn-dependent protease, contains TPR repeats, at 127,536 to 128,999
_0178
EX28DRAFT_0179: EX28DRAFT_0179 - Predicted permease, at 129,221 to 130,285
_0179
Position (kb) 127
128
129 Strain fitness (log2 ratio) -1
0
1
2 at 126.743 kb on + strand, within EX28DRAFT_0176 at 126.743 kb on + strand, within EX28DRAFT_0176 at 126.744 kb on - strand, within EX28DRAFT_0176 at 126.768 kb on + strand, within EX28DRAFT_0176 at 126.769 kb on - strand, within EX28DRAFT_0176 at 126.769 kb on - strand, within EX28DRAFT_0176 at 127.162 kb on + strand at 127.162 kb on + strand at 127.314 kb on - strand, within EX28DRAFT_0177 at 127.315 kb on + strand, within EX28DRAFT_0177 at 127.316 kb on - strand, within EX28DRAFT_0177 at 127.415 kb on - strand, within EX28DRAFT_0177 at 127.534 kb on + strand at 127.537 kb on + strand at 127.537 kb on + strand at 127.538 kb on - strand at 127.538 kb on - strand at 127.538 kb on - strand at 127.781 kb on + strand, within EX28DRAFT_0178 at 127.839 kb on + strand, within EX28DRAFT_0178 at 127.839 kb on + strand, within EX28DRAFT_0178 at 127.844 kb on - strand, within EX28DRAFT_0178 at 127.859 kb on + strand, within EX28DRAFT_0178 at 127.966 kb on + strand, within EX28DRAFT_0178 at 127.967 kb on - strand, within EX28DRAFT_0178 at 128.027 kb on - strand, within EX28DRAFT_0178 at 128.146 kb on + strand, within EX28DRAFT_0178 at 128.146 kb on + strand, within EX28DRAFT_0178 at 128.147 kb on - strand, within EX28DRAFT_0178 at 128.147 kb on - strand, within EX28DRAFT_0178 at 128.296 kb on + strand, within EX28DRAFT_0178 at 128.296 kb on + strand, within EX28DRAFT_0178 at 128.702 kb on + strand, within EX28DRAFT_0178 at 128.777 kb on - strand, within EX28DRAFT_0178 at 128.777 kb on - strand, within EX28DRAFT_0178 at 128.781 kb on + strand, within EX28DRAFT_0178 at 128.782 kb on - strand, within EX28DRAFT_0178 at 128.833 kb on + strand, within EX28DRAFT_0178 at 128.833 kb on + strand, within EX28DRAFT_0178 at 128.833 kb on + strand, within EX28DRAFT_0178 at 128.834 kb on - strand, within EX28DRAFT_0178 at 128.836 kb on + strand, within EX28DRAFT_0178 at 129.000 kb on - strand at 129.014 kb on - strand at 129.014 kb on - strand at 129.014 kb on - strand at 129.027 kb on + strand at 129.079 kb on - strand at 129.088 kb on - strand at 129.088 kb on - strand at 129.170 kb on + strand at 129.170 kb on + strand at 129.171 kb on - strand at 129.220 kb on + strand at 129.220 kb on + strand at 129.221 kb on - strand at 129.221 kb on - strand at 129.221 kb on - strand at 129.235 kb on - strand at 129.369 kb on - strand, within EX28DRAFT_0179 at 129.369 kb on - strand, within EX28DRAFT_0179 at 129.438 kb on + strand, within EX28DRAFT_0179 at 129.671 kb on + strand, within EX28DRAFT_0179 at 129.672 kb on - strand, within EX28DRAFT_0179 at 129.714 kb on - strand, within EX28DRAFT_0179 at 129.714 kb on - strand, within EX28DRAFT_0179 at 129.714 kb on - strand, within EX28DRAFT_0179 at 129.854 kb on + strand, within EX28DRAFT_0179 at 129.855 kb on - strand, within EX28DRAFT_0179 at 129.855 kb on - strand, within EX28DRAFT_0179 at 129.855 kb on - strand, within EX28DRAFT_0179
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 126,743 + EX28DRAFT_0176 0.49 +0.1 126,743 + EX28DRAFT_0176 0.49 -0.5 126,744 - EX28DRAFT_0176 0.49 -0.5 126,768 + EX28DRAFT_0176 0.52 +0.8 126,769 - EX28DRAFT_0176 0.52 -0.2 126,769 - EX28DRAFT_0176 0.52 -0.3 127,162 + +0.1 127,162 + -0.4 127,314 - EX28DRAFT_0177 0.43 +2.0 127,315 + EX28DRAFT_0177 0.43 +0.8 127,316 - EX28DRAFT_0177 0.43 +0.1 127,415 - EX28DRAFT_0177 0.71 +1.1 127,534 + -0.3 127,537 + -0.1 127,537 + -0.3 127,538 - +0.2 127,538 - +1.4 127,538 - +0.6 127,781 + EX28DRAFT_0178 0.17 -0.0 127,839 + EX28DRAFT_0178 0.21 +0.1 127,839 + EX28DRAFT_0178 0.21 -0.5 127,844 - EX28DRAFT_0178 0.21 +0.3 127,859 + EX28DRAFT_0178 0.22 +0.0 127,966 + EX28DRAFT_0178 0.29 +0.1 127,967 - EX28DRAFT_0178 0.29 +0.1 128,027 - EX28DRAFT_0178 0.34 +0.2 128,146 + EX28DRAFT_0178 0.42 +0.1 128,146 + EX28DRAFT_0178 0.42 -0.4 128,147 - EX28DRAFT_0178 0.42 -0.2 128,147 - EX28DRAFT_0178 0.42 +1.9 128,296 + EX28DRAFT_0178 0.52 -0.6 128,296 + EX28DRAFT_0178 0.52 -0.2 128,702 + EX28DRAFT_0178 0.80 -0.6 128,777 - EX28DRAFT_0178 0.85 -0.3 128,777 - EX28DRAFT_0178 0.85 -0.4 128,781 + EX28DRAFT_0178 0.85 -0.7 128,782 - EX28DRAFT_0178 0.85 -0.4 128,833 + EX28DRAFT_0178 0.89 -0.5 128,833 + EX28DRAFT_0178 0.89 +0.3 128,833 + EX28DRAFT_0178 0.89 -0.4 128,834 - EX28DRAFT_0178 0.89 -0.0 128,836 + EX28DRAFT_0178 0.89 +0.9 129,000 - +0.1 129,014 - +0.6 129,014 - -0.0 129,014 - +0.2 129,027 + -0.5 129,079 - +0.8 129,088 - -0.1 129,088 - +0.5 129,170 + -0.6 129,170 + -1.0 129,171 - -0.3 129,220 + -0.1 129,220 + +0.6 129,221 - -0.2 129,221 - -0.8 129,221 - -0.2 129,235 - -0.2 129,369 - EX28DRAFT_0179 0.14 +0.1 129,369 - EX28DRAFT_0179 0.14 -0.0 129,438 + EX28DRAFT_0179 0.20 +0.4 129,671 + EX28DRAFT_0179 0.42 -0.0 129,672 - EX28DRAFT_0179 0.42 +0.6 129,714 - EX28DRAFT_0179 0.46 +0.1 129,714 - EX28DRAFT_0179 0.46 -0.0 129,714 - EX28DRAFT_0179 0.46 -0.2 129,854 + EX28DRAFT_0179 0.59 +0.1 129,855 - EX28DRAFT_0179 0.60 -0.0 129,855 - EX28DRAFT_0179 0.60 -0.3 129,855 - EX28DRAFT_0179 0.60 +0.6
Or see this region's nucleotide sequence