Experiment: PYE no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_03649 and CCNA_03650 overlap by 4 nucleotides CCNA_03650 and CCNA_03651 overlap by 4 nucleotides
CCNA_03649: CCNA_03649 - Ser/Thr kinase-related phosphotransferase, at 3,806,915 to 3,808,006
_03649
CCNA_03650: CCNA_03650 - mannose-1-phosphate guanyltransferase, at 3,808,003 to 3,808,731
_03650
CCNA_03651: CCNA_03651 - ATP-dependent nuclease subunit B, at 3,808,728 to 3,811,718
_03651
Position (kb)
3808
3809 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3807.021 kb on + strand at 3807.029 kb on - strand, within CCNA_03649 at 3807.058 kb on - strand, within CCNA_03649 at 3807.087 kb on - strand, within CCNA_03649 at 3807.211 kb on + strand, within CCNA_03649 at 3807.237 kb on - strand, within CCNA_03649 at 3807.238 kb on - strand, within CCNA_03649 at 3807.262 kb on - strand, within CCNA_03649 at 3807.262 kb on - strand, within CCNA_03649 at 3807.282 kb on - strand, within CCNA_03649 at 3807.282 kb on - strand, within CCNA_03649 at 3807.286 kb on + strand, within CCNA_03649 at 3807.287 kb on + strand, within CCNA_03649 at 3807.301 kb on + strand, within CCNA_03649 at 3807.329 kb on + strand, within CCNA_03649 at 3807.337 kb on - strand, within CCNA_03649 at 3807.399 kb on - strand, within CCNA_03649 at 3807.409 kb on - strand, within CCNA_03649 at 3807.437 kb on + strand, within CCNA_03649 at 3807.439 kb on + strand, within CCNA_03649 at 3807.498 kb on - strand, within CCNA_03649 at 3807.555 kb on - strand, within CCNA_03649 at 3807.573 kb on + strand, within CCNA_03649 at 3807.668 kb on + strand, within CCNA_03649 at 3807.668 kb on + strand, within CCNA_03649 at 3807.676 kb on - strand, within CCNA_03649 at 3807.676 kb on - strand, within CCNA_03649 at 3807.676 kb on - strand, within CCNA_03649 at 3807.744 kb on - strand, within CCNA_03649 at 3807.770 kb on - strand, within CCNA_03649 at 3807.774 kb on + strand, within CCNA_03649 at 3807.779 kb on + strand, within CCNA_03649 at 3807.810 kb on + strand, within CCNA_03649 at 3807.815 kb on - strand, within CCNA_03649 at 3807.886 kb on + strand, within CCNA_03649 at 3807.886 kb on + strand, within CCNA_03649 at 3807.890 kb on - strand, within CCNA_03649 at 3807.910 kb on + strand at 3807.918 kb on - strand at 3807.918 kb on - strand at 3807.929 kb on - strand at 3807.929 kb on - strand at 3807.950 kb on - strand at 3807.950 kb on - strand at 3808.080 kb on + strand, within CCNA_03650 at 3808.080 kb on + strand, within CCNA_03650 at 3808.110 kb on + strand, within CCNA_03650 at 3808.119 kb on - strand, within CCNA_03650 at 3808.181 kb on - strand, within CCNA_03650 at 3808.194 kb on + strand, within CCNA_03650 at 3808.321 kb on + strand, within CCNA_03650 at 3808.385 kb on - strand, within CCNA_03650 at 3808.434 kb on + strand, within CCNA_03650 at 3808.437 kb on - strand, within CCNA_03650 at 3808.485 kb on - strand, within CCNA_03650 at 3808.730 kb on + strand at 3809.226 kb on + strand, within CCNA_03651 at 3809.712 kb on - strand, within CCNA_03651
Per-strain Table
Position Strand Gene LocusTag Fraction PYE no stress control remove 3,807,021 + -0.4 3,807,029 - CCNA_03649 0.10 -1.0 3,807,058 - CCNA_03649 0.13 -1.4 3,807,087 - CCNA_03649 0.16 -1.2 3,807,211 + CCNA_03649 0.27 -1.0 3,807,237 - CCNA_03649 0.29 -0.9 3,807,238 - CCNA_03649 0.30 -1.3 3,807,262 - CCNA_03649 0.32 -0.0 3,807,262 - CCNA_03649 0.32 +0.9 3,807,282 - CCNA_03649 0.34 +0.3 3,807,282 - CCNA_03649 0.34 -1.1 3,807,286 + CCNA_03649 0.34 +1.3 3,807,287 + CCNA_03649 0.34 -1.8 3,807,301 + CCNA_03649 0.35 +0.1 3,807,329 + CCNA_03649 0.38 -2.7 3,807,337 - CCNA_03649 0.39 -0.1 3,807,399 - CCNA_03649 0.44 -0.6 3,807,409 - CCNA_03649 0.45 -0.6 3,807,437 + CCNA_03649 0.48 +1.1 3,807,439 + CCNA_03649 0.48 -0.4 3,807,498 - CCNA_03649 0.53 -0.2 3,807,555 - CCNA_03649 0.59 -2.3 3,807,573 + CCNA_03649 0.60 -1.3 3,807,668 + CCNA_03649 0.69 -0.8 3,807,668 + CCNA_03649 0.69 -1.0 3,807,676 - CCNA_03649 0.70 -0.4 3,807,676 - CCNA_03649 0.70 +1.9 3,807,676 - CCNA_03649 0.70 +1.0 3,807,744 - CCNA_03649 0.76 -1.3 3,807,770 - CCNA_03649 0.78 -0.9 3,807,774 + CCNA_03649 0.79 -0.3 3,807,779 + CCNA_03649 0.79 +0.2 3,807,810 + CCNA_03649 0.82 +0.9 3,807,815 - CCNA_03649 0.82 +0.5 3,807,886 + CCNA_03649 0.89 -0.5 3,807,886 + CCNA_03649 0.89 +0.5 3,807,890 - CCNA_03649 0.89 -2.5 3,807,910 + +1.0 3,807,918 - -1.1 3,807,918 - -0.5 3,807,929 - -0.6 3,807,929 - +0.6 3,807,950 - -0.4 3,807,950 - -0.2 3,808,080 + CCNA_03650 0.11 -0.8 3,808,080 + CCNA_03650 0.11 -0.4 3,808,110 + CCNA_03650 0.15 -1.1 3,808,119 - CCNA_03650 0.16 -0.6 3,808,181 - CCNA_03650 0.24 +0.2 3,808,194 + CCNA_03650 0.26 -0.2 3,808,321 + CCNA_03650 0.44 -0.0 3,808,385 - CCNA_03650 0.52 +0.2 3,808,434 + CCNA_03650 0.59 +0.6 3,808,437 - CCNA_03650 0.60 -0.0 3,808,485 - CCNA_03650 0.66 -0.0 3,808,730 + -0.2 3,809,226 + CCNA_03651 0.17 -1.4 3,809,712 - CCNA_03651 0.33 -0.9
Or see this region's nucleotide sequence