Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19935 and CA264_19940 are separated by 172 nucleotides CA264_19940 and CA264_19945 are separated by 6 nucleotides CA264_19945 and CA264_19950 are separated by 47 nucleotides CA264_19950 and CA264_19955 are separated by 113 nucleotides
CA264_19935: CA264_19935 - sodium:calcium symporter, at 4,596,819 to 4,598,471
_19935
CA264_19940: CA264_19940 - DNA uptake-like protein, at 4,598,644 to 4,599,588
_19940
CA264_19945: CA264_19945 - hypothetical protein, at 4,599,595 to 4,599,780
_19945
CA264_19950: CA264_19950 - hypothetical protein, at 4,599,828 to 4,600,121
_19950
CA264_19955: CA264_19955 - SAM-dependent methyltransferase, at 4,600,235 to 4,601,074
_19955
Position (kb)
4598
4599
4600 Strain fitness (log2 ratio)
-1
0
1
2 at 4597.826 kb on + strand, within CA264_19935 at 4597.913 kb on + strand, within CA264_19935 at 4597.977 kb on - strand, within CA264_19935 at 4597.995 kb on + strand, within CA264_19935 at 4597.996 kb on - strand, within CA264_19935 at 4598.013 kb on + strand, within CA264_19935 at 4598.031 kb on - strand, within CA264_19935 at 4598.292 kb on - strand, within CA264_19935 at 4598.299 kb on + strand, within CA264_19935 at 4598.300 kb on - strand, within CA264_19935 at 4598.387 kb on + strand at 4598.388 kb on - strand at 4598.392 kb on + strand at 4598.393 kb on - strand at 4598.393 kb on - strand at 4598.404 kb on + strand at 4598.430 kb on + strand at 4598.469 kb on + strand at 4598.494 kb on - strand at 4598.533 kb on - strand at 4598.591 kb on + strand at 4598.626 kb on - strand at 4598.727 kb on - strand at 4598.770 kb on + strand, within CA264_19940 at 4598.793 kb on + strand, within CA264_19940 at 4598.872 kb on + strand, within CA264_19940 at 4598.993 kb on + strand, within CA264_19940 at 4599.007 kb on + strand, within CA264_19940 at 4599.008 kb on - strand, within CA264_19940 at 4599.070 kb on + strand, within CA264_19940 at 4599.071 kb on - strand, within CA264_19940 at 4599.074 kb on + strand, within CA264_19940 at 4599.075 kb on - strand, within CA264_19940 at 4599.103 kb on + strand, within CA264_19940 at 4599.103 kb on + strand, within CA264_19940 at 4599.106 kb on - strand, within CA264_19940 at 4599.106 kb on - strand, within CA264_19940 at 4599.106 kb on - strand, within CA264_19940 at 4599.119 kb on - strand, within CA264_19940 at 4599.278 kb on - strand, within CA264_19940 at 4599.303 kb on + strand, within CA264_19940 at 4599.303 kb on + strand, within CA264_19940 at 4599.328 kb on + strand, within CA264_19940 at 4599.328 kb on + strand, within CA264_19940 at 4599.368 kb on - strand, within CA264_19940 at 4599.369 kb on + strand, within CA264_19940 at 4599.370 kb on - strand, within CA264_19940 at 4599.404 kb on + strand, within CA264_19940 at 4599.405 kb on - strand, within CA264_19940 at 4599.448 kb on + strand, within CA264_19940 at 4599.505 kb on + strand at 4599.506 kb on - strand at 4599.533 kb on + strand at 4599.534 kb on - strand at 4599.557 kb on - strand at 4599.627 kb on - strand, within CA264_19945 at 4599.646 kb on + strand, within CA264_19945 at 4599.646 kb on + strand, within CA264_19945 at 4599.649 kb on + strand, within CA264_19945 at 4599.712 kb on + strand, within CA264_19945 at 4599.712 kb on + strand, within CA264_19945 at 4599.712 kb on + strand, within CA264_19945 at 4599.713 kb on - strand at 4599.713 kb on - strand, within CA264_19945 at 4599.783 kb on + strand at 4599.784 kb on - strand at 4599.785 kb on + strand at 4599.786 kb on - strand at 4599.809 kb on - strand at 4599.830 kb on - strand at 4599.873 kb on - strand, within CA264_19950 at 4599.982 kb on + strand, within CA264_19950 at 4599.987 kb on + strand, within CA264_19950 at 4599.991 kb on + strand, within CA264_19950 at 4599.991 kb on + strand, within CA264_19950 at 4600.051 kb on + strand, within CA264_19950 at 4600.052 kb on - strand, within CA264_19950 at 4600.057 kb on + strand, within CA264_19950 at 4600.074 kb on - strand, within CA264_19950 at 4600.074 kb on - strand, within CA264_19950 at 4600.083 kb on - strand, within CA264_19950 at 4600.083 kb on - strand, within CA264_19950 at 4600.083 kb on - strand, within CA264_19950 at 4600.167 kb on + strand at 4600.168 kb on - strand at 4600.170 kb on - strand at 4600.269 kb on + strand at 4600.361 kb on + strand, within CA264_19955 at 4600.379 kb on + strand, within CA264_19955 at 4600.447 kb on - strand, within CA264_19955 at 4600.588 kb on - strand, within CA264_19955
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 4,597,826 + CA264_19935 0.61 -0.2 4,597,913 + CA264_19935 0.66 -0.2 4,597,977 - CA264_19935 0.70 +0.1 4,597,995 + CA264_19935 0.71 +0.1 4,597,996 - CA264_19935 0.71 -0.5 4,598,013 + CA264_19935 0.72 +0.0 4,598,031 - CA264_19935 0.73 +0.3 4,598,292 - CA264_19935 0.89 +0.5 4,598,299 + CA264_19935 0.90 +0.5 4,598,300 - CA264_19935 0.90 -0.0 4,598,387 + -0.8 4,598,388 - +0.4 4,598,392 + -0.5 4,598,393 - -0.3 4,598,393 - -1.1 4,598,404 + +0.6 4,598,430 + +0.7 4,598,469 + +1.3 4,598,494 - +0.2 4,598,533 - -1.3 4,598,591 + -1.4 4,598,626 - -0.3 4,598,727 - +0.0 4,598,770 + CA264_19940 0.13 +0.2 4,598,793 + CA264_19940 0.16 +0.6 4,598,872 + CA264_19940 0.24 +0.3 4,598,993 + CA264_19940 0.37 +0.8 4,599,007 + CA264_19940 0.38 +0.5 4,599,008 - CA264_19940 0.39 -0.4 4,599,070 + CA264_19940 0.45 -0.2 4,599,071 - CA264_19940 0.45 -0.1 4,599,074 + CA264_19940 0.46 -1.1 4,599,075 - CA264_19940 0.46 +0.4 4,599,103 + CA264_19940 0.49 -0.4 4,599,103 + CA264_19940 0.49 -0.3 4,599,106 - CA264_19940 0.49 +0.2 4,599,106 - CA264_19940 0.49 -0.3 4,599,106 - CA264_19940 0.49 -0.5 4,599,119 - CA264_19940 0.50 -0.7 4,599,278 - CA264_19940 0.67 +1.1 4,599,303 + CA264_19940 0.70 +0.8 4,599,303 + CA264_19940 0.70 +0.1 4,599,328 + CA264_19940 0.72 -0.7 4,599,328 + CA264_19940 0.72 -0.2 4,599,368 - CA264_19940 0.77 -0.1 4,599,369 + CA264_19940 0.77 -0.0 4,599,370 - CA264_19940 0.77 +2.0 4,599,404 + CA264_19940 0.80 +0.8 4,599,405 - CA264_19940 0.81 -1.5 4,599,448 + CA264_19940 0.85 +0.2 4,599,505 + +0.5 4,599,506 - +1.0 4,599,533 + -0.6 4,599,534 - +0.7 4,599,557 - -0.1 4,599,627 - CA264_19945 0.17 +0.1 4,599,646 + CA264_19945 0.27 -0.1 4,599,646 + CA264_19945 0.27 -0.2 4,599,649 + CA264_19945 0.29 -0.0 4,599,712 + CA264_19945 0.63 +0.4 4,599,712 + CA264_19945 0.63 +1.1 4,599,712 + CA264_19945 0.63 +0.5 4,599,713 - +1.2 4,599,713 - CA264_19945 0.63 +0.2 4,599,783 + -0.5 4,599,784 - -0.0 4,599,785 + -0.3 4,599,786 - -0.6 4,599,809 - -0.6 4,599,830 - -0.7 4,599,873 - CA264_19950 0.15 -1.0 4,599,982 + CA264_19950 0.52 -0.7 4,599,987 + CA264_19950 0.54 +1.4 4,599,991 + CA264_19950 0.55 +1.0 4,599,991 + CA264_19950 0.55 -0.3 4,600,051 + CA264_19950 0.76 +0.1 4,600,052 - CA264_19950 0.76 +1.6 4,600,057 + CA264_19950 0.78 +0.4 4,600,074 - CA264_19950 0.84 -1.3 4,600,074 - CA264_19950 0.84 -0.1 4,600,083 - CA264_19950 0.87 +0.0 4,600,083 - CA264_19950 0.87 +0.8 4,600,083 - CA264_19950 0.87 -0.6 4,600,167 + +0.2 4,600,168 - +2.2 4,600,170 - +0.7 4,600,269 + -0.8 4,600,361 + CA264_19955 0.15 +0.0 4,600,379 + CA264_19955 0.17 -0.3 4,600,447 - CA264_19955 0.25 -0.9 4,600,588 - CA264_19955 0.42 +0.7
Or see this region's nucleotide sequence