Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18100 and CA264_18105 are separated by 123 nucleotides CA264_18105 and CA264_18110 are separated by 89 nucleotides CA264_18110 and CA264_18115 are separated by 74 nucleotides
CA264_18100: CA264_18100 - ABC-ATPase UvrA, at 4,208,480 to 4,211,395
_18100
CA264_18105: CA264_18105 - hypothetical protein, at 4,211,519 to 4,211,902
_18105
CA264_18110: CA264_18110 - hypothetical protein, at 4,211,992 to 4,212,420
_18110
CA264_18115: CA264_18115 - Rossman fold protein, TIGR00730 family, at 4,212,495 to 4,213,358
_18115
Position (kb)
4211
4212 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4210.734 kb on + strand, within CA264_18100 at 4210.957 kb on - strand, within CA264_18100 at 4210.957 kb on - strand, within CA264_18100 at 4210.960 kb on + strand, within CA264_18100 at 4210.960 kb on + strand, within CA264_18100 at 4210.961 kb on - strand, within CA264_18100 at 4210.961 kb on - strand, within CA264_18100 at 4210.961 kb on - strand, within CA264_18100 at 4210.997 kb on - strand, within CA264_18100 at 4211.181 kb on + strand at 4211.182 kb on - strand at 4211.182 kb on - strand at 4211.275 kb on + strand at 4211.276 kb on - strand at 4211.276 kb on - strand at 4211.276 kb on - strand at 4211.299 kb on - strand at 4211.387 kb on + strand at 4211.631 kb on + strand, within CA264_18105 at 4211.647 kb on - strand, within CA264_18105 at 4211.700 kb on + strand, within CA264_18105 at 4211.702 kb on + strand, within CA264_18105 at 4211.702 kb on + strand, within CA264_18105 at 4211.703 kb on - strand, within CA264_18105 at 4211.827 kb on + strand, within CA264_18105 at 4211.849 kb on + strand, within CA264_18105 at 4212.230 kb on + strand, within CA264_18110 at 4212.332 kb on - strand, within CA264_18110 at 4212.332 kb on - strand, within CA264_18110 at 4212.376 kb on - strand, within CA264_18110 at 4212.386 kb on - strand at 4212.386 kb on - strand at 4212.472 kb on - strand at 4212.472 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 4,210,734 + CA264_18100 0.77 -3.6 4,210,957 - CA264_18100 0.85 -2.3 4,210,957 - CA264_18100 0.85 -2.2 4,210,960 + CA264_18100 0.85 -3.8 4,210,960 + CA264_18100 0.85 -2.2 4,210,961 - CA264_18100 0.85 -1.2 4,210,961 - CA264_18100 0.85 -1.6 4,210,961 - CA264_18100 0.85 -1.4 4,210,997 - CA264_18100 0.86 -0.5 4,211,181 + -2.7 4,211,182 - -2.6 4,211,182 - -3.0 4,211,275 + -0.8 4,211,276 - -2.0 4,211,276 - -1.6 4,211,276 - -4.1 4,211,299 - -0.7 4,211,387 + +0.9 4,211,631 + CA264_18105 0.29 -0.2 4,211,647 - CA264_18105 0.33 -1.6 4,211,700 + CA264_18105 0.47 -0.7 4,211,702 + CA264_18105 0.48 -1.8 4,211,702 + CA264_18105 0.48 +1.2 4,211,703 - CA264_18105 0.48 -2.2 4,211,827 + CA264_18105 0.80 +0.3 4,211,849 + CA264_18105 0.86 -2.1 4,212,230 + CA264_18110 0.55 +1.2 4,212,332 - CA264_18110 0.79 -0.8 4,212,332 - CA264_18110 0.79 -0.3 4,212,376 - CA264_18110 0.90 -0.5 4,212,386 - -1.4 4,212,386 - -0.5 4,212,472 - +0.2 4,212,472 - -1.6
Or see this region's nucleotide sequence