Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17545 and CA264_17550 are separated by 129 nucleotides CA264_17550 and CA264_17555 are separated by 197 nucleotides
CA264_17545: CA264_17545 - single-stranded-DNA-specific exonuclease RecJ, at 4,088,497 to 4,090,203
_17545
CA264_17550: CA264_17550 - lysozyme, at 4,090,333 to 4,091,157
_17550
CA264_17555: CA264_17555 - ABC transporter ATP-binding protein, at 4,091,355 to 4,092,086
_17555
Position (kb)
4090
4091
4092 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4089.357 kb on + strand, within CA264_17545 at 4089.358 kb on - strand, within CA264_17545 at 4089.435 kb on + strand, within CA264_17545 at 4089.462 kb on + strand, within CA264_17545 at 4089.753 kb on + strand, within CA264_17545 at 4089.754 kb on - strand, within CA264_17545 at 4089.754 kb on - strand, within CA264_17545 at 4089.754 kb on - strand, within CA264_17545 at 4089.754 kb on - strand, within CA264_17545 at 4089.754 kb on - strand, within CA264_17545 at 4089.754 kb on - strand, within CA264_17545 at 4089.754 kb on - strand, within CA264_17545 at 4089.757 kb on + strand, within CA264_17545 at 4089.757 kb on + strand, within CA264_17545 at 4089.758 kb on - strand, within CA264_17545 at 4089.758 kb on - strand, within CA264_17545 at 4089.758 kb on - strand, within CA264_17545 at 4089.758 kb on - strand, within CA264_17545 at 4089.771 kb on + strand, within CA264_17545 at 4089.782 kb on + strand, within CA264_17545 at 4089.803 kb on + strand, within CA264_17545 at 4089.804 kb on - strand, within CA264_17545 at 4089.832 kb on - strand, within CA264_17545 at 4089.887 kb on + strand, within CA264_17545 at 4089.897 kb on + strand, within CA264_17545 at 4089.983 kb on - strand, within CA264_17545 at 4089.998 kb on + strand, within CA264_17545 at 4089.998 kb on + strand, within CA264_17545 at 4089.998 kb on + strand, within CA264_17545 at 4090.091 kb on - strand at 4090.101 kb on - strand at 4090.131 kb on + strand at 4090.132 kb on - strand at 4090.151 kb on - strand at 4090.161 kb on - strand at 4090.218 kb on - strand at 4090.247 kb on - strand at 4090.262 kb on + strand at 4090.284 kb on + strand at 4090.285 kb on - strand at 4090.312 kb on - strand at 4090.357 kb on + strand at 4090.358 kb on - strand at 4090.419 kb on + strand, within CA264_17550 at 4090.420 kb on - strand, within CA264_17550 at 4090.420 kb on - strand, within CA264_17550 at 4090.449 kb on + strand, within CA264_17550 at 4090.450 kb on - strand, within CA264_17550 at 4090.450 kb on - strand, within CA264_17550 at 4090.496 kb on + strand, within CA264_17550 at 4090.529 kb on - strand, within CA264_17550 at 4090.572 kb on - strand, within CA264_17550 at 4090.622 kb on + strand, within CA264_17550 at 4090.702 kb on + strand, within CA264_17550 at 4090.814 kb on + strand, within CA264_17550 at 4090.814 kb on + strand, within CA264_17550 at 4090.815 kb on - strand, within CA264_17550 at 4091.053 kb on - strand, within CA264_17550 at 4091.053 kb on - strand, within CA264_17550 at 4091.053 kb on - strand, within CA264_17550 at 4091.158 kb on - strand at 4091.158 kb on - strand at 4091.171 kb on - strand at 4091.171 kb on - strand at 4091.175 kb on + strand at 4091.193 kb on - strand at 4091.235 kb on - strand at 4091.237 kb on - strand at 4091.237 kb on - strand at 4091.279 kb on + strand at 4091.286 kb on + strand at 4092.095 kb on + strand at 4092.097 kb on + strand at 4092.098 kb on - strand at 4092.098 kb on - strand at 4092.112 kb on - strand at 4092.127 kb on - strand at 4092.131 kb on - strand at 4092.147 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 4,089,357 + CA264_17545 0.50 +0.3 4,089,358 - CA264_17545 0.50 -0.3 4,089,435 + CA264_17545 0.55 -1.4 4,089,462 + CA264_17545 0.57 -0.7 4,089,753 + CA264_17545 0.74 -0.5 4,089,754 - CA264_17545 0.74 -1.5 4,089,754 - CA264_17545 0.74 -2.9 4,089,754 - CA264_17545 0.74 -1.0 4,089,754 - CA264_17545 0.74 -0.2 4,089,754 - CA264_17545 0.74 -0.8 4,089,754 - CA264_17545 0.74 -0.8 4,089,754 - CA264_17545 0.74 -1.4 4,089,757 + CA264_17545 0.74 +0.9 4,089,757 + CA264_17545 0.74 -0.6 4,089,758 - CA264_17545 0.74 -0.9 4,089,758 - CA264_17545 0.74 -2.3 4,089,758 - CA264_17545 0.74 -0.5 4,089,758 - CA264_17545 0.74 +0.0 4,089,771 + CA264_17545 0.75 -0.7 4,089,782 + CA264_17545 0.75 -0.7 4,089,803 + CA264_17545 0.77 -0.1 4,089,804 - CA264_17545 0.77 -0.6 4,089,832 - CA264_17545 0.78 -1.6 4,089,887 + CA264_17545 0.81 -0.5 4,089,897 + CA264_17545 0.82 +0.8 4,089,983 - CA264_17545 0.87 +0.0 4,089,998 + CA264_17545 0.88 -1.2 4,089,998 + CA264_17545 0.88 +0.2 4,089,998 + CA264_17545 0.88 -2.2 4,090,091 - +0.2 4,090,101 - -1.3 4,090,131 + -1.2 4,090,132 - -0.4 4,090,151 - -0.8 4,090,161 - -0.5 4,090,218 - +0.6 4,090,247 - -0.5 4,090,262 + +0.1 4,090,284 + +0.9 4,090,285 - -0.5 4,090,312 - +0.9 4,090,357 + -0.4 4,090,358 - +0.1 4,090,419 + CA264_17550 0.10 -0.8 4,090,420 - CA264_17550 0.11 +1.5 4,090,420 - CA264_17550 0.11 +0.3 4,090,449 + CA264_17550 0.14 -0.6 4,090,450 - CA264_17550 0.14 +0.3 4,090,450 - CA264_17550 0.14 +0.5 4,090,496 + CA264_17550 0.20 +1.2 4,090,529 - CA264_17550 0.24 -0.7 4,090,572 - CA264_17550 0.29 -1.3 4,090,622 + CA264_17550 0.35 -0.9 4,090,702 + CA264_17550 0.45 +0.6 4,090,814 + CA264_17550 0.58 +0.7 4,090,814 + CA264_17550 0.58 +0.2 4,090,815 - CA264_17550 0.58 +1.0 4,091,053 - CA264_17550 0.87 +0.6 4,091,053 - CA264_17550 0.87 -0.2 4,091,053 - CA264_17550 0.87 -0.9 4,091,158 - +0.6 4,091,158 - -0.4 4,091,171 - -0.7 4,091,171 - -0.2 4,091,175 + -0.5 4,091,193 - +1.0 4,091,235 - -0.1 4,091,237 - +1.7 4,091,237 - -0.8 4,091,279 + +0.1 4,091,286 + -1.3 4,092,095 + +0.1 4,092,097 + -0.3 4,092,098 - +0.3 4,092,098 - +1.7 4,092,112 - -0.0 4,092,127 - +1.5 4,092,131 - -0.1 4,092,147 + -0.2
Or see this region's nucleotide sequence