Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15740 and CA264_15745 are separated by 80 nucleotides CA264_15745 and CA264_15750 are separated by 409 nucleotides CA264_15750 and CA264_15755 are separated by 117 nucleotides
CA264_15740: CA264_15740 - metal-dependent phosphohydrolase, at 3,677,649 to 3,678,881
_15740
CA264_15745: CA264_15745 - tRNA-Arg, at 3,678,962 to 3,679,036
_15745
CA264_15750: CA264_15750 - hypothetical protein, at 3,679,446 to 3,679,682
_15750
CA264_15755: CA264_15755 - hypothetical protein, at 3,679,800 to 3,680,165
_15755
Position (kb)
3678
3679
3680 Strain fitness (log2 ratio)
-2
-1
0
1 at 3677.982 kb on - strand, within CA264_15740 at 3677.982 kb on - strand, within CA264_15740 at 3677.993 kb on + strand, within CA264_15740 at 3678.043 kb on + strand, within CA264_15740 at 3678.044 kb on - strand, within CA264_15740 at 3678.044 kb on - strand, within CA264_15740 at 3678.184 kb on + strand, within CA264_15740 at 3678.248 kb on - strand, within CA264_15740 at 3678.332 kb on + strand, within CA264_15740 at 3678.350 kb on + strand, within CA264_15740 at 3678.351 kb on - strand, within CA264_15740 at 3678.456 kb on - strand, within CA264_15740 at 3678.459 kb on + strand, within CA264_15740 at 3678.460 kb on - strand, within CA264_15740 at 3678.543 kb on - strand, within CA264_15740 at 3678.551 kb on - strand, within CA264_15740 at 3678.738 kb on + strand, within CA264_15740 at 3678.762 kb on + strand at 3678.763 kb on - strand at 3678.770 kb on - strand at 3678.770 kb on - strand at 3678.813 kb on + strand at 3678.814 kb on - strand at 3678.818 kb on + strand at 3678.818 kb on + strand at 3678.818 kb on + strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.820 kb on + strand at 3678.820 kb on + strand at 3678.821 kb on - strand at 3678.821 kb on - strand at 3678.824 kb on + strand at 3678.880 kb on - strand at 3678.884 kb on + strand at 3678.885 kb on - strand at 3678.890 kb on + strand at 3678.893 kb on - strand at 3678.893 kb on - strand at 3678.893 kb on - strand at 3678.893 kb on - strand at 3678.925 kb on + strand at 3678.928 kb on + strand at 3678.929 kb on - strand at 3678.982 kb on - strand, within CA264_15745 at 3679.124 kb on - strand at 3679.142 kb on + strand at 3679.241 kb on + strand at 3679.241 kb on + strand at 3679.242 kb on - strand at 3679.298 kb on + strand at 3679.298 kb on + strand at 3679.298 kb on + strand at 3679.304 kb on - strand at 3679.304 kb on - strand at 3679.327 kb on - strand at 3679.327 kb on - strand at 3679.330 kb on + strand at 3679.331 kb on - strand at 3679.339 kb on + strand at 3679.345 kb on + strand at 3679.352 kb on + strand at 3679.353 kb on - strand at 3679.376 kb on - strand at 3679.380 kb on + strand at 3679.381 kb on - strand at 3679.390 kb on + strand at 3679.390 kb on + strand at 3679.391 kb on - strand at 3679.408 kb on + strand at 3679.414 kb on + strand at 3679.414 kb on + strand at 3679.421 kb on + strand at 3679.507 kb on + strand, within CA264_15750 at 3679.618 kb on + strand, within CA264_15750 at 3679.618 kb on + strand, within CA264_15750 at 3679.618 kb on + strand at 3679.619 kb on - strand, within CA264_15750 at 3679.619 kb on - strand, within CA264_15750 at 3679.619 kb on - strand, within CA264_15750 at 3679.623 kb on - strand, within CA264_15750 at 3679.641 kb on + strand, within CA264_15750 at 3679.699 kb on + strand at 3679.721 kb on - strand at 3679.739 kb on + strand at 3679.739 kb on + strand at 3679.775 kb on + strand at 3679.776 kb on - strand at 3679.779 kb on + strand at 3679.779 kb on + strand at 3679.779 kb on + strand at 3679.780 kb on - strand at 3679.791 kb on - strand at 3679.873 kb on + strand, within CA264_15755 at 3679.874 kb on - strand, within CA264_15755 at 3679.943 kb on + strand, within CA264_15755 at 3679.993 kb on - strand, within CA264_15755 at 3680.001 kb on + strand, within CA264_15755 at 3680.014 kb on + strand, within CA264_15755 at 3680.015 kb on - strand, within CA264_15755
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,677,982 - CA264_15740 0.27 -0.4 3,677,982 - CA264_15740 0.27 +0.6 3,677,993 + CA264_15740 0.28 -0.4 3,678,043 + CA264_15740 0.32 -0.4 3,678,044 - CA264_15740 0.32 +0.4 3,678,044 - CA264_15740 0.32 -0.4 3,678,184 + CA264_15740 0.43 -1.7 3,678,248 - CA264_15740 0.49 -1.0 3,678,332 + CA264_15740 0.55 +0.1 3,678,350 + CA264_15740 0.57 +0.9 3,678,351 - CA264_15740 0.57 -0.4 3,678,456 - CA264_15740 0.65 +1.4 3,678,459 + CA264_15740 0.66 -0.5 3,678,460 - CA264_15740 0.66 -0.5 3,678,543 - CA264_15740 0.73 -0.3 3,678,551 - CA264_15740 0.73 +0.0 3,678,738 + CA264_15740 0.88 -0.7 3,678,762 + -0.1 3,678,763 - -0.2 3,678,770 - -0.4 3,678,770 - +0.2 3,678,813 + +0.3 3,678,814 - -1.6 3,678,818 + -0.1 3,678,818 + -0.4 3,678,818 + -0.7 3,678,819 - +0.7 3,678,819 - -2.0 3,678,819 - -1.5 3,678,819 - -0.0 3,678,819 - -1.4 3,678,819 - +0.2 3,678,820 + -0.8 3,678,820 + +1.5 3,678,821 - -1.1 3,678,821 - -2.0 3,678,824 + +0.1 3,678,880 - +0.2 3,678,884 + -1.1 3,678,885 - -1.3 3,678,890 + -0.5 3,678,893 - +0.0 3,678,893 - +0.3 3,678,893 - -0.1 3,678,893 - +0.7 3,678,925 + -0.2 3,678,928 + +0.6 3,678,929 - -0.1 3,678,982 - CA264_15745 0.27 -0.1 3,679,124 - -1.2 3,679,142 + +1.3 3,679,241 + +0.1 3,679,241 + +0.1 3,679,242 - +1.5 3,679,298 + +0.5 3,679,298 + -1.0 3,679,298 + +0.2 3,679,304 - -0.2 3,679,304 - -0.4 3,679,327 - -1.4 3,679,327 - -0.3 3,679,330 + -1.4 3,679,331 - -1.0 3,679,339 + -0.7 3,679,345 + -1.2 3,679,352 + -0.0 3,679,353 - -0.5 3,679,376 - +0.2 3,679,380 + +1.1 3,679,381 - -1.6 3,679,390 + +0.5 3,679,390 + -0.4 3,679,391 - -1.1 3,679,408 + -0.0 3,679,414 + -0.9 3,679,414 + -1.0 3,679,421 + -1.2 3,679,507 + CA264_15750 0.26 +0.2 3,679,618 + CA264_15750 0.73 -0.6 3,679,618 + CA264_15750 0.73 +0.2 3,679,618 + +1.5 3,679,619 - CA264_15750 0.73 -0.1 3,679,619 - CA264_15750 0.73 -1.3 3,679,619 - CA264_15750 0.73 +0.2 3,679,623 - CA264_15750 0.75 +0.3 3,679,641 + CA264_15750 0.82 +0.5 3,679,699 + +0.0 3,679,721 - -2.7 3,679,739 + +0.2 3,679,739 + +0.5 3,679,775 + -0.4 3,679,776 - +0.1 3,679,779 + +0.9 3,679,779 + -0.4 3,679,779 + -0.6 3,679,780 - -0.1 3,679,791 - +0.8 3,679,873 + CA264_15755 0.20 +1.2 3,679,874 - CA264_15755 0.20 +0.5 3,679,943 + CA264_15755 0.39 -0.3 3,679,993 - CA264_15755 0.53 +0.8 3,680,001 + CA264_15755 0.55 -0.3 3,680,014 + CA264_15755 0.58 +0.3 3,680,015 - CA264_15755 0.59 -0.8
Or see this region's nucleotide sequence