Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12330 and CA264_12335 are separated by 156 nucleotides CA264_12335 and CA264_12340 are separated by 1 nucleotides CA264_12340 and CA264_12345 are separated by 126 nucleotides
CA264_12330: CA264_12330 - hypothetical protein, at 2,874,122 to 2,874,385
_12330
CA264_12335: CA264_12335 - pyridoxal phosphate-dependent aminotransferase, at 2,874,542 to 2,875,684
_12335
CA264_12340: CA264_12340 - acetyltransferase, at 2,875,686 to 2,876,282
_12340
CA264_12345: CA264_12345 - lipid carrier--UDP-N-acetylgalactosaminyltransferase, at 2,876,409 to 2,877,026
_12345
Position (kb)
2874
2875
2876 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2873.705 kb on + strand at 2873.705 kb on + strand at 2873.829 kb on - strand at 2873.842 kb on + strand at 2873.930 kb on + strand at 2873.930 kb on + strand at 2873.930 kb on + strand at 2873.931 kb on - strand at 2873.963 kb on - strand at 2873.972 kb on - strand at 2874.065 kb on + strand at 2874.093 kb on - strand at 2874.093 kb on - strand at 2874.096 kb on - strand at 2874.146 kb on - strand at 2874.210 kb on - strand, within CA264_12330 at 2874.226 kb on + strand, within CA264_12330 at 2874.384 kb on - strand at 2874.394 kb on - strand at 2874.394 kb on - strand at 2874.436 kb on + strand at 2874.438 kb on + strand at 2874.439 kb on - strand at 2874.522 kb on + strand at 2874.537 kb on + strand at 2874.538 kb on - strand at 2874.545 kb on + strand at 2874.546 kb on - strand at 2874.662 kb on - strand, within CA264_12335 at 2874.809 kb on + strand, within CA264_12335 at 2874.902 kb on - strand, within CA264_12335 at 2874.953 kb on + strand, within CA264_12335 at 2874.971 kb on - strand, within CA264_12335 at 2874.971 kb on - strand, within CA264_12335 at 2875.009 kb on - strand, within CA264_12335 at 2875.172 kb on - strand, within CA264_12335 at 2875.173 kb on + strand, within CA264_12335 at 2875.173 kb on + strand, within CA264_12335 at 2875.173 kb on + strand, within CA264_12335 at 2875.174 kb on - strand, within CA264_12335 at 2875.280 kb on + strand, within CA264_12335 at 2875.280 kb on + strand, within CA264_12335 at 2875.281 kb on - strand, within CA264_12335 at 2875.313 kb on + strand, within CA264_12335 at 2875.313 kb on + strand, within CA264_12335 at 2875.313 kb on + strand, within CA264_12335 at 2875.325 kb on + strand, within CA264_12335 at 2875.325 kb on + strand, within CA264_12335 at 2875.326 kb on - strand, within CA264_12335 at 2875.326 kb on - strand, within CA264_12335 at 2875.338 kb on - strand, within CA264_12335 at 2875.404 kb on + strand, within CA264_12335 at 2875.404 kb on + strand, within CA264_12335 at 2875.450 kb on + strand, within CA264_12335 at 2875.480 kb on + strand, within CA264_12335 at 2875.518 kb on - strand, within CA264_12335 at 2875.545 kb on - strand, within CA264_12335 at 2875.548 kb on + strand, within CA264_12335 at 2875.553 kb on - strand, within CA264_12335 at 2875.578 kb on - strand at 2875.582 kb on + strand at 2875.610 kb on - strand at 2875.610 kb on - strand at 2875.670 kb on + strand at 2875.670 kb on + strand at 2875.685 kb on - strand at 2875.699 kb on - strand at 2875.824 kb on + strand, within CA264_12340 at 2875.937 kb on + strand, within CA264_12340 at 2875.937 kb on + strand, within CA264_12340 at 2875.956 kb on + strand, within CA264_12340 at 2876.015 kb on + strand, within CA264_12340 at 2876.059 kb on - strand, within CA264_12340 at 2876.128 kb on - strand, within CA264_12340 at 2876.218 kb on - strand, within CA264_12340 at 2876.224 kb on - strand at 2876.279 kb on - strand at 2876.305 kb on + strand at 2876.390 kb on - strand at 2876.390 kb on - strand at 2876.390 kb on - strand at 2876.507 kb on + strand, within CA264_12345 at 2876.536 kb on - strand, within CA264_12345 at 2876.539 kb on + strand, within CA264_12345 at 2876.540 kb on - strand, within CA264_12345 at 2876.540 kb on - strand, within CA264_12345 at 2876.551 kb on + strand, within CA264_12345 at 2876.552 kb on - strand, within CA264_12345 at 2876.552 kb on - strand, within CA264_12345 at 2876.555 kb on + strand, within CA264_12345 at 2876.652 kb on - strand, within CA264_12345
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,873,705 + +0.6 2,873,705 + +0.7 2,873,829 - +0.1 2,873,842 + +0.1 2,873,930 + -0.5 2,873,930 + +2.2 2,873,930 + -0.6 2,873,931 - +0.1 2,873,963 - -1.2 2,873,972 - -0.0 2,874,065 + +0.4 2,874,093 - +2.3 2,874,093 - +0.1 2,874,096 - -0.3 2,874,146 - -0.5 2,874,210 - CA264_12330 0.33 -0.2 2,874,226 + CA264_12330 0.39 -0.8 2,874,384 - -0.8 2,874,394 - -0.1 2,874,394 - -0.0 2,874,436 + -0.6 2,874,438 + -0.8 2,874,439 - +0.6 2,874,522 + -0.5 2,874,537 + -2.0 2,874,538 - -0.6 2,874,545 + -0.5 2,874,546 - +1.0 2,874,662 - CA264_12335 0.10 -0.7 2,874,809 + CA264_12335 0.23 -1.2 2,874,902 - CA264_12335 0.31 +0.5 2,874,953 + CA264_12335 0.36 -0.6 2,874,971 - CA264_12335 0.38 +0.5 2,874,971 - CA264_12335 0.38 -0.5 2,875,009 - CA264_12335 0.41 +0.3 2,875,172 - CA264_12335 0.55 -2.4 2,875,173 + CA264_12335 0.55 +0.0 2,875,173 + CA264_12335 0.55 -1.2 2,875,173 + CA264_12335 0.55 +0.5 2,875,174 - CA264_12335 0.55 -1.7 2,875,280 + CA264_12335 0.65 -0.7 2,875,280 + CA264_12335 0.65 -1.6 2,875,281 - CA264_12335 0.65 -1.1 2,875,313 + CA264_12335 0.67 -1.8 2,875,313 + CA264_12335 0.67 +0.5 2,875,313 + CA264_12335 0.67 +0.2 2,875,325 + CA264_12335 0.69 -2.3 2,875,325 + CA264_12335 0.69 -2.6 2,875,326 - CA264_12335 0.69 -1.1 2,875,326 - CA264_12335 0.69 -1.4 2,875,338 - CA264_12335 0.70 -0.2 2,875,404 + CA264_12335 0.75 -2.4 2,875,404 + CA264_12335 0.75 -0.2 2,875,450 + CA264_12335 0.79 -2.6 2,875,480 + CA264_12335 0.82 -1.8 2,875,518 - CA264_12335 0.85 -0.2 2,875,545 - CA264_12335 0.88 -0.3 2,875,548 + CA264_12335 0.88 -0.7 2,875,553 - CA264_12335 0.88 -2.2 2,875,578 - -0.1 2,875,582 + -0.4 2,875,610 - -1.6 2,875,610 - -0.0 2,875,670 + -0.7 2,875,670 + +0.7 2,875,685 - -2.3 2,875,699 - +0.3 2,875,824 + CA264_12340 0.23 -0.5 2,875,937 + CA264_12340 0.42 -0.1 2,875,937 + CA264_12340 0.42 +1.7 2,875,956 + CA264_12340 0.45 +1.1 2,876,015 + CA264_12340 0.55 -0.2 2,876,059 - CA264_12340 0.62 +1.2 2,876,128 - CA264_12340 0.74 -1.2 2,876,218 - CA264_12340 0.89 +0.6 2,876,224 - -0.1 2,876,279 - -0.3 2,876,305 + +0.3 2,876,390 - -1.8 2,876,390 - -1.2 2,876,390 - +0.4 2,876,507 + CA264_12345 0.16 -1.4 2,876,536 - CA264_12345 0.21 -2.1 2,876,539 + CA264_12345 0.21 -2.5 2,876,540 - CA264_12345 0.21 -1.1 2,876,540 - CA264_12345 0.21 -0.3 2,876,551 + CA264_12345 0.23 -2.8 2,876,552 - CA264_12345 0.23 -2.9 2,876,552 - CA264_12345 0.23 +1.1 2,876,555 + CA264_12345 0.24 -1.4 2,876,652 - CA264_12345 0.39 -1.8
Or see this region's nucleotide sequence