Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12190 and CA264_12195 are separated by 40 nucleotides CA264_12195 and CA264_12200 are separated by 467 nucleotides CA264_12200 and CA264_12205 are separated by 66 nucleotides CA264_12205 and CA264_12210 are separated by 158 nucleotides
CA264_12190: CA264_12190 - hypothetical protein, at 2,840,906 to 2,841,511
_12190
CA264_12195: CA264_12195 - DoxX family protein, at 2,841,552 to 2,842,004
_12195
CA264_12200: CA264_12200 - hypothetical protein, at 2,842,472 to 2,844,229
_12200
CA264_12205: CA264_12205 - DNA starvation/stationary phase protection protein, at 2,844,296 to 2,844,772
_12205
CA264_12210: CA264_12210 - hypothetical protein, at 2,844,931 to 2,846,238
_12210
Position (kb)
2842
2843
2844
2845 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2841.505 kb on - strand at 2841.506 kb on + strand at 2841.506 kb on + strand at 2841.507 kb on - strand at 2841.514 kb on + strand at 2841.515 kb on - strand at 2841.515 kb on - strand at 2841.520 kb on + strand at 2841.521 kb on - strand at 2841.521 kb on - strand at 2841.521 kb on - strand at 2841.523 kb on - strand at 2841.525 kb on + strand at 2841.539 kb on + strand at 2841.542 kb on - strand at 2841.542 kb on - strand at 2841.542 kb on - strand at 2841.551 kb on + strand at 2841.552 kb on - strand at 2841.559 kb on + strand at 2841.560 kb on - strand at 2841.629 kb on + strand, within CA264_12195 at 2841.630 kb on - strand, within CA264_12195 at 2841.631 kb on + strand, within CA264_12195 at 2841.682 kb on + strand, within CA264_12195 at 2841.832 kb on + strand, within CA264_12195 at 2841.832 kb on + strand, within CA264_12195 at 2841.990 kb on - strand at 2842.026 kb on - strand at 2842.026 kb on - strand at 2842.051 kb on - strand at 2842.056 kb on + strand at 2842.056 kb on + strand at 2842.056 kb on + strand at 2842.057 kb on - strand at 2842.057 kb on - strand at 2842.057 kb on - strand at 2842.138 kb on + strand at 2842.139 kb on - strand at 2842.162 kb on + strand at 2842.163 kb on - strand at 2842.163 kb on - strand at 2842.188 kb on + strand at 2842.189 kb on - strand at 2842.224 kb on - strand at 2842.317 kb on - strand at 2842.343 kb on + strand at 2842.391 kb on - strand at 2842.417 kb on + strand at 2842.454 kb on - strand at 2842.476 kb on + strand at 2842.476 kb on + strand at 2842.477 kb on - strand at 2842.488 kb on + strand at 2842.489 kb on - strand at 2842.489 kb on - strand at 2842.503 kb on + strand at 2842.551 kb on - strand at 2842.583 kb on + strand at 2842.583 kb on + strand at 2842.584 kb on - strand at 2842.584 kb on - strand at 2842.626 kb on - strand at 2842.626 kb on - strand at 2842.692 kb on + strand, within CA264_12200 at 2842.791 kb on + strand, within CA264_12200 at 2842.791 kb on + strand, within CA264_12200 at 2842.791 kb on + strand, within CA264_12200 at 2842.792 kb on - strand, within CA264_12200 at 2842.792 kb on - strand, within CA264_12200 at 2842.886 kb on - strand, within CA264_12200 at 2842.903 kb on + strand, within CA264_12200 at 2842.950 kb on - strand, within CA264_12200 at 2843.097 kb on - strand, within CA264_12200 at 2843.159 kb on + strand, within CA264_12200 at 2843.228 kb on + strand, within CA264_12200 at 2843.267 kb on - strand, within CA264_12200 at 2843.291 kb on + strand, within CA264_12200 at 2843.385 kb on - strand, within CA264_12200 at 2843.437 kb on - strand, within CA264_12200 at 2843.571 kb on + strand, within CA264_12200 at 2843.571 kb on + strand, within CA264_12200 at 2843.591 kb on + strand, within CA264_12200 at 2843.592 kb on - strand, within CA264_12200 at 2843.594 kb on + strand, within CA264_12200 at 2843.595 kb on - strand, within CA264_12200 at 2843.595 kb on - strand, within CA264_12200 at 2843.633 kb on + strand, within CA264_12200 at 2843.634 kb on - strand, within CA264_12200 at 2843.678 kb on + strand, within CA264_12200 at 2843.740 kb on - strand, within CA264_12200 at 2843.740 kb on - strand, within CA264_12200 at 2843.783 kb on + strand, within CA264_12200 at 2843.784 kb on - strand, within CA264_12200 at 2843.795 kb on + strand, within CA264_12200 at 2843.797 kb on + strand, within CA264_12200 at 2843.798 kb on - strand, within CA264_12200 at 2843.828 kb on + strand, within CA264_12200 at 2843.900 kb on + strand, within CA264_12200 at 2843.901 kb on - strand, within CA264_12200 at 2843.963 kb on + strand, within CA264_12200 at 2843.963 kb on + strand, within CA264_12200 at 2843.964 kb on - strand, within CA264_12200 at 2844.008 kb on + strand, within CA264_12200 at 2844.009 kb on - strand, within CA264_12200 at 2844.020 kb on + strand, within CA264_12200 at 2844.164 kb on + strand at 2844.164 kb on + strand at 2844.170 kb on + strand at 2844.185 kb on + strand at 2844.213 kb on + strand at 2844.213 kb on + strand at 2844.213 kb on + strand at 2844.213 kb on + strand at 2844.239 kb on + strand at 2844.286 kb on - strand at 2844.318 kb on + strand at 2844.516 kb on + strand, within CA264_12205 at 2844.520 kb on + strand, within CA264_12205 at 2844.637 kb on + strand, within CA264_12205 at 2844.637 kb on + strand, within CA264_12205 at 2844.690 kb on + strand, within CA264_12205 at 2844.690 kb on + strand, within CA264_12205 at 2844.690 kb on + strand, within CA264_12205 at 2844.691 kb on - strand, within CA264_12205 at 2844.747 kb on - strand at 2844.790 kb on + strand at 2844.790 kb on + strand at 2844.819 kb on - strand at 2844.871 kb on + strand at 2844.872 kb on - strand at 2844.872 kb on - strand at 2844.872 kb on - strand at 2844.875 kb on + strand at 2844.875 kb on + strand at 2844.921 kb on + strand at 2844.933 kb on - strand at 2844.941 kb on - strand at 2844.946 kb on - strand at 2844.946 kb on - strand at 2845.035 kb on - strand at 2845.035 kb on - strand at 2845.035 kb on - strand at 2845.065 kb on - strand, within CA264_12210 at 2845.065 kb on - strand, within CA264_12210 at 2845.065 kb on - strand, within CA264_12210 at 2845.069 kb on - strand, within CA264_12210 at 2845.076 kb on + strand, within CA264_12210 at 2845.077 kb on - strand, within CA264_12210 at 2845.138 kb on - strand, within CA264_12210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,841,505 - +1.2 2,841,506 + +0.0 2,841,506 + +1.7 2,841,507 - +1.1 2,841,514 + -0.2 2,841,515 - +0.8 2,841,515 - +1.6 2,841,520 + -0.6 2,841,521 - +0.6 2,841,521 - +0.5 2,841,521 - +1.3 2,841,523 - +1.6 2,841,525 + +0.3 2,841,539 + +0.5 2,841,542 - +1.0 2,841,542 - +0.9 2,841,542 - +1.1 2,841,551 + -0.1 2,841,552 - +1.2 2,841,559 + -0.6 2,841,560 - +0.8 2,841,629 + CA264_12195 0.17 -0.7 2,841,630 - CA264_12195 0.17 +2.2 2,841,631 + CA264_12195 0.17 +1.3 2,841,682 + CA264_12195 0.29 +0.6 2,841,832 + CA264_12195 0.62 -0.5 2,841,832 + CA264_12195 0.62 +0.6 2,841,990 - +0.7 2,842,026 - +0.3 2,842,026 - +1.7 2,842,051 - +1.7 2,842,056 + +1.8 2,842,056 + +0.8 2,842,056 + +0.3 2,842,057 - +0.1 2,842,057 - +0.6 2,842,057 - +2.1 2,842,138 + +1.1 2,842,139 - +1.2 2,842,162 + +0.4 2,842,163 - +1.6 2,842,163 - -0.3 2,842,188 + +0.3 2,842,189 - -1.3 2,842,224 - +2.4 2,842,317 - -0.1 2,842,343 + -0.0 2,842,391 - +1.1 2,842,417 + +0.4 2,842,454 - +2.1 2,842,476 + -2.6 2,842,476 + -0.1 2,842,477 - +1.0 2,842,488 + +0.6 2,842,489 - +0.9 2,842,489 - +1.3 2,842,503 + +0.1 2,842,551 - +1.0 2,842,583 + -0.3 2,842,583 + -0.0 2,842,584 - +1.1 2,842,584 - +0.6 2,842,626 - -0.6 2,842,626 - +1.2 2,842,692 + CA264_12200 0.13 +0.2 2,842,791 + CA264_12200 0.18 +0.7 2,842,791 + CA264_12200 0.18 -1.2 2,842,791 + CA264_12200 0.18 +1.2 2,842,792 - CA264_12200 0.18 -0.5 2,842,792 - CA264_12200 0.18 +0.8 2,842,886 - CA264_12200 0.24 -0.6 2,842,903 + CA264_12200 0.25 +1.0 2,842,950 - CA264_12200 0.27 +0.5 2,843,097 - CA264_12200 0.36 +1.4 2,843,159 + CA264_12200 0.39 -0.1 2,843,228 + CA264_12200 0.43 -0.3 2,843,267 - CA264_12200 0.45 -1.1 2,843,291 + CA264_12200 0.47 -0.5 2,843,385 - CA264_12200 0.52 +0.4 2,843,437 - CA264_12200 0.55 +0.1 2,843,571 + CA264_12200 0.63 -0.9 2,843,571 + CA264_12200 0.63 -0.7 2,843,591 + CA264_12200 0.64 +0.2 2,843,592 - CA264_12200 0.64 +1.0 2,843,594 + CA264_12200 0.64 +0.3 2,843,595 - CA264_12200 0.64 -0.1 2,843,595 - CA264_12200 0.64 +0.1 2,843,633 + CA264_12200 0.66 -0.5 2,843,634 - CA264_12200 0.66 -0.4 2,843,678 + CA264_12200 0.69 +0.8 2,843,740 - CA264_12200 0.72 -0.2 2,843,740 - CA264_12200 0.72 +0.3 2,843,783 + CA264_12200 0.75 -0.2 2,843,784 - CA264_12200 0.75 -0.4 2,843,795 + CA264_12200 0.75 +0.2 2,843,797 + CA264_12200 0.75 +0.7 2,843,798 - CA264_12200 0.75 +0.5 2,843,828 + CA264_12200 0.77 -0.3 2,843,900 + CA264_12200 0.81 -0.1 2,843,901 - CA264_12200 0.81 +0.2 2,843,963 + CA264_12200 0.85 -0.4 2,843,963 + CA264_12200 0.85 +0.2 2,843,964 - CA264_12200 0.85 +0.8 2,844,008 + CA264_12200 0.87 -0.6 2,844,009 - CA264_12200 0.87 +1.1 2,844,020 + CA264_12200 0.88 -0.1 2,844,164 + +0.6 2,844,164 + -0.4 2,844,170 + -0.4 2,844,185 + -0.0 2,844,213 + -0.7 2,844,213 + -0.6 2,844,213 + -0.3 2,844,213 + -0.3 2,844,239 + -1.2 2,844,286 - +1.3 2,844,318 + +0.0 2,844,516 + CA264_12205 0.46 -0.5 2,844,520 + CA264_12205 0.47 +0.7 2,844,637 + CA264_12205 0.71 +0.2 2,844,637 + CA264_12205 0.71 -0.8 2,844,690 + CA264_12205 0.83 +0.3 2,844,690 + CA264_12205 0.83 +0.5 2,844,690 + CA264_12205 0.83 +0.0 2,844,691 - CA264_12205 0.83 -0.8 2,844,747 - +0.0 2,844,790 + -0.2 2,844,790 + -0.3 2,844,819 - +0.3 2,844,871 + +0.9 2,844,872 - +0.4 2,844,872 - +0.7 2,844,872 - -0.9 2,844,875 + -2.3 2,844,875 + +0.0 2,844,921 + -2.0 2,844,933 - +0.3 2,844,941 - +0.1 2,844,946 - +0.8 2,844,946 - -0.1 2,845,035 - -0.3 2,845,035 - +0.8 2,845,035 - +0.8 2,845,065 - CA264_12210 0.10 +0.1 2,845,065 - CA264_12210 0.10 +0.4 2,845,065 - CA264_12210 0.10 -0.3 2,845,069 - CA264_12210 0.11 +0.7 2,845,076 + CA264_12210 0.11 +1.3 2,845,077 - CA264_12210 0.11 -1.1 2,845,138 - CA264_12210 0.16 -0.5
Or see this region's nucleotide sequence