Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11190 and CA264_11195 are separated by 147 nucleotides CA264_11195 and CA264_11200 are separated by 133 nucleotides
CA264_11190: CA264_11190 - peptidase M23, at 2,591,632 to 2,592,897
_11190
CA264_11195: CA264_11195 - phosphatase, at 2,593,045 to 2,593,944
_11195
CA264_11200: CA264_11200 - RNA degradosome polyphosphate kinase, at 2,594,078 to 2,596,177
_11200
Position (kb)
2593
2594 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2592.045 kb on + strand, within CA264_11190 at 2592.289 kb on + strand, within CA264_11190 at 2592.289 kb on + strand, within CA264_11190 at 2592.290 kb on - strand, within CA264_11190 at 2592.290 kb on - strand, within CA264_11190 at 2592.412 kb on + strand, within CA264_11190 at 2592.448 kb on + strand, within CA264_11190 at 2592.449 kb on - strand, within CA264_11190 at 2592.493 kb on - strand, within CA264_11190 at 2592.493 kb on - strand, within CA264_11190 at 2592.609 kb on - strand, within CA264_11190 at 2592.609 kb on - strand, within CA264_11190 at 2592.664 kb on + strand, within CA264_11190 at 2592.664 kb on + strand, within CA264_11190 at 2592.665 kb on - strand, within CA264_11190 at 2592.696 kb on + strand, within CA264_11190 at 2592.696 kb on + strand, within CA264_11190 at 2592.854 kb on + strand at 2592.854 kb on + strand at 2592.988 kb on + strand at 2592.991 kb on + strand at 2593.007 kb on + strand at 2593.007 kb on + strand at 2593.007 kb on + strand at 2593.008 kb on - strand at 2593.008 kb on - strand at 2593.011 kb on + strand at 2593.022 kb on + strand at 2593.022 kb on + strand at 2593.023 kb on - strand at 2593.052 kb on + strand at 2593.052 kb on + strand at 2593.062 kb on - strand at 2593.062 kb on - strand at 2593.062 kb on - strand at 2593.103 kb on + strand at 2593.144 kb on + strand, within CA264_11195 at 2593.144 kb on + strand, within CA264_11195 at 2593.145 kb on - strand, within CA264_11195 at 2593.194 kb on + strand, within CA264_11195 at 2593.223 kb on + strand, within CA264_11195 at 2593.223 kb on + strand, within CA264_11195 at 2593.224 kb on - strand, within CA264_11195 at 2593.224 kb on - strand, within CA264_11195 at 2593.233 kb on - strand, within CA264_11195 at 2593.276 kb on + strand, within CA264_11195 at 2593.277 kb on - strand, within CA264_11195 at 2593.468 kb on - strand, within CA264_11195 at 2593.609 kb on + strand, within CA264_11195 at 2593.723 kb on + strand, within CA264_11195 at 2593.723 kb on + strand, within CA264_11195 at 2593.724 kb on - strand, within CA264_11195 at 2593.724 kb on - strand, within CA264_11195 at 2593.759 kb on - strand, within CA264_11195 at 2593.814 kb on - strand, within CA264_11195 at 2593.848 kb on + strand, within CA264_11195 at 2593.848 kb on + strand, within CA264_11195 at 2593.979 kb on + strand at 2593.989 kb on - strand at 2593.990 kb on + strand at 2593.991 kb on - strand at 2594.013 kb on + strand at 2594.013 kb on + strand at 2594.023 kb on + strand at 2594.124 kb on - strand at 2594.199 kb on + strand at 2594.226 kb on + strand at 2594.227 kb on - strand at 2594.364 kb on + strand, within CA264_11200 at 2594.735 kb on + strand, within CA264_11200 at 2594.741 kb on + strand, within CA264_11200 at 2594.795 kb on + strand, within CA264_11200 at 2594.796 kb on - strand, within CA264_11200
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,592,045 + CA264_11190 0.33 -1.0 2,592,289 + CA264_11190 0.52 +0.8 2,592,289 + CA264_11190 0.52 -0.5 2,592,290 - CA264_11190 0.52 +0.1 2,592,290 - CA264_11190 0.52 -0.7 2,592,412 + CA264_11190 0.62 +1.9 2,592,448 + CA264_11190 0.64 +0.2 2,592,449 - CA264_11190 0.65 +0.1 2,592,493 - CA264_11190 0.68 -0.0 2,592,493 - CA264_11190 0.68 +0.0 2,592,609 - CA264_11190 0.77 -1.6 2,592,609 - CA264_11190 0.77 -0.3 2,592,664 + CA264_11190 0.82 -0.5 2,592,664 + CA264_11190 0.82 +0.1 2,592,665 - CA264_11190 0.82 -0.4 2,592,696 + CA264_11190 0.84 -1.4 2,592,696 + CA264_11190 0.84 -0.3 2,592,854 + +0.3 2,592,854 + -0.5 2,592,988 + -0.5 2,592,991 + +1.3 2,593,007 + +0.1 2,593,007 + -1.0 2,593,007 + -0.0 2,593,008 - -1.7 2,593,008 - +0.5 2,593,011 + -1.3 2,593,022 + -0.1 2,593,022 + +1.0 2,593,023 - -1.6 2,593,052 + +0.3 2,593,052 + -0.8 2,593,062 - -1.0 2,593,062 - -0.6 2,593,062 - -2.0 2,593,103 + +0.1 2,593,144 + CA264_11195 0.11 +0.2 2,593,144 + CA264_11195 0.11 -0.4 2,593,145 - CA264_11195 0.11 +0.3 2,593,194 + CA264_11195 0.17 +0.4 2,593,223 + CA264_11195 0.20 -0.8 2,593,223 + CA264_11195 0.20 +1.6 2,593,224 - CA264_11195 0.20 +0.5 2,593,224 - CA264_11195 0.20 +0.2 2,593,233 - CA264_11195 0.21 -0.2 2,593,276 + CA264_11195 0.26 +0.0 2,593,277 - CA264_11195 0.26 -1.8 2,593,468 - CA264_11195 0.47 -0.5 2,593,609 + CA264_11195 0.63 +0.8 2,593,723 + CA264_11195 0.75 -0.5 2,593,723 + CA264_11195 0.75 -0.4 2,593,724 - CA264_11195 0.75 -0.3 2,593,724 - CA264_11195 0.75 -1.2 2,593,759 - CA264_11195 0.79 +0.1 2,593,814 - CA264_11195 0.85 -0.8 2,593,848 + CA264_11195 0.89 +0.2 2,593,848 + CA264_11195 0.89 +0.3 2,593,979 + -0.1 2,593,989 - -0.2 2,593,990 + -1.2 2,593,991 - +1.2 2,594,013 + +0.4 2,594,013 + -0.9 2,594,023 + -1.4 2,594,124 - -0.3 2,594,199 + -2.2 2,594,226 + -1.0 2,594,227 - -1.4 2,594,364 + CA264_11200 0.14 -1.6 2,594,735 + CA264_11200 0.31 -2.7 2,594,741 + CA264_11200 0.32 -0.4 2,594,795 + CA264_11200 0.34 -1.4 2,594,796 - CA264_11200 0.34 -2.2
Or see this region's nucleotide sequence