Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09385 and CA264_09390 are separated by 278 nucleotides CA264_09390 and CA264_09395 are separated by 84 nucleotides CA264_09395 and CA264_09400 are separated by 71 nucleotides
CA264_09385: CA264_09385 - zinc-dependent metalloprotease, at 2,192,946 to 2,195,435
_09385
CA264_09390: CA264_09390 - oxidoreductase, at 2,195,714 to 2,196,664
_09390
CA264_09395: CA264_09395 - hypothetical protein, at 2,196,749 to 2,197,372
_09395
CA264_09400: CA264_09400 - hypothetical protein, at 2,197,444 to 2,197,671
_09400
Position (kb)
2195
2196
2197 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2194.747 kb on + strand, within CA264_09385 at 2194.747 kb on + strand, within CA264_09385 at 2194.747 kb on + strand, within CA264_09385 at 2194.747 kb on + strand, within CA264_09385 at 2194.751 kb on + strand, within CA264_09385 at 2194.770 kb on + strand, within CA264_09385 at 2194.771 kb on - strand, within CA264_09385 at 2194.808 kb on + strand, within CA264_09385 at 2194.837 kb on + strand, within CA264_09385 at 2194.957 kb on + strand, within CA264_09385 at 2194.976 kb on + strand, within CA264_09385 at 2194.977 kb on - strand, within CA264_09385 at 2194.977 kb on - strand, within CA264_09385 at 2195.020 kb on + strand, within CA264_09385 at 2195.021 kb on - strand, within CA264_09385 at 2195.021 kb on - strand, within CA264_09385 at 2195.200 kb on + strand at 2195.201 kb on - strand at 2195.203 kb on + strand at 2195.204 kb on - strand at 2195.275 kb on + strand at 2195.422 kb on + strand at 2195.445 kb on - strand at 2195.457 kb on + strand at 2195.512 kb on + strand at 2195.518 kb on + strand at 2195.531 kb on + strand at 2195.531 kb on + strand at 2195.532 kb on - strand at 2195.536 kb on - strand at 2195.537 kb on + strand at 2195.551 kb on + strand at 2195.675 kb on + strand at 2195.676 kb on - strand at 2195.676 kb on - strand at 2195.683 kb on + strand at 2195.716 kb on - strand at 2195.723 kb on - strand at 2195.813 kb on + strand, within CA264_09390 at 2195.813 kb on + strand, within CA264_09390 at 2195.903 kb on + strand, within CA264_09390 at 2195.904 kb on - strand, within CA264_09390 at 2196.067 kb on - strand, within CA264_09390 at 2196.067 kb on - strand, within CA264_09390 at 2196.159 kb on + strand, within CA264_09390 at 2196.160 kb on - strand, within CA264_09390 at 2196.209 kb on + strand, within CA264_09390 at 2196.209 kb on + strand, within CA264_09390 at 2196.210 kb on - strand, within CA264_09390 at 2196.234 kb on - strand, within CA264_09390 at 2196.354 kb on + strand, within CA264_09390 at 2196.355 kb on - strand, within CA264_09390 at 2196.548 kb on - strand, within CA264_09390 at 2196.606 kb on - strand at 2196.664 kb on + strand at 2196.664 kb on + strand at 2196.664 kb on + strand at 2196.664 kb on + strand at 2196.664 kb on + strand at 2196.669 kb on + strand at 2196.669 kb on + strand at 2196.669 kb on + strand at 2196.677 kb on + strand at 2196.677 kb on + strand at 2196.677 kb on + strand at 2196.678 kb on - strand at 2196.699 kb on + strand at 2196.699 kb on + strand at 2196.700 kb on - strand at 2196.702 kb on - strand at 2196.702 kb on - strand at 2196.825 kb on + strand, within CA264_09395 at 2196.826 kb on - strand, within CA264_09395 at 2196.946 kb on - strand, within CA264_09395 at 2197.036 kb on + strand, within CA264_09395 at 2197.056 kb on + strand, within CA264_09395 at 2197.127 kb on + strand, within CA264_09395 at 2197.129 kb on + strand, within CA264_09395 at 2197.129 kb on + strand, within CA264_09395 at 2197.129 kb on + strand, within CA264_09395 at 2197.130 kb on - strand, within CA264_09395 at 2197.213 kb on + strand, within CA264_09395 at 2197.337 kb on - strand at 2197.367 kb on + strand at 2197.367 kb on + strand at 2197.372 kb on + strand at 2197.372 kb on + strand at 2197.373 kb on - strand at 2197.373 kb on - strand at 2197.444 kb on - strand at 2197.512 kb on - strand, within CA264_09400 at 2197.519 kb on + strand, within CA264_09400 at 2197.519 kb on + strand, within CA264_09400 at 2197.520 kb on - strand, within CA264_09400 at 2197.520 kb on - strand, within CA264_09400 at 2197.575 kb on + strand, within CA264_09400 at 2197.575 kb on + strand, within CA264_09400 at 2197.576 kb on - strand, within CA264_09400 at 2197.642 kb on + strand, within CA264_09400
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,194,747 + CA264_09385 0.72 +0.3 2,194,747 + CA264_09385 0.72 +0.3 2,194,747 + CA264_09385 0.72 -2.0 2,194,747 + CA264_09385 0.72 +0.1 2,194,751 + CA264_09385 0.72 -1.9 2,194,770 + CA264_09385 0.73 -0.0 2,194,771 - CA264_09385 0.73 -0.3 2,194,808 + CA264_09385 0.75 +0.1 2,194,837 + CA264_09385 0.76 +0.4 2,194,957 + CA264_09385 0.81 +0.2 2,194,976 + CA264_09385 0.82 +0.3 2,194,977 - CA264_09385 0.82 -0.6 2,194,977 - CA264_09385 0.82 +0.4 2,195,020 + CA264_09385 0.83 +0.1 2,195,021 - CA264_09385 0.83 +0.0 2,195,021 - CA264_09385 0.83 -0.4 2,195,200 + +0.6 2,195,201 - +0.9 2,195,203 + +0.1 2,195,204 - -0.6 2,195,275 + -1.6 2,195,422 + +0.8 2,195,445 - +1.0 2,195,457 + +0.1 2,195,512 + -0.0 2,195,518 + +0.1 2,195,531 + +0.2 2,195,531 + -0.1 2,195,532 - +2.1 2,195,536 - -0.5 2,195,537 + +1.5 2,195,551 + -0.4 2,195,675 + +1.3 2,195,676 - -1.6 2,195,676 - +0.0 2,195,683 + +0.0 2,195,716 - -0.7 2,195,723 - -0.6 2,195,813 + CA264_09390 0.10 +0.2 2,195,813 + CA264_09390 0.10 -1.0 2,195,903 + CA264_09390 0.20 -1.6 2,195,904 - CA264_09390 0.20 -0.9 2,196,067 - CA264_09390 0.37 +2.6 2,196,067 - CA264_09390 0.37 -0.2 2,196,159 + CA264_09390 0.47 -0.6 2,196,160 - CA264_09390 0.47 -0.1 2,196,209 + CA264_09390 0.52 -0.1 2,196,209 + CA264_09390 0.52 +0.8 2,196,210 - CA264_09390 0.52 +1.1 2,196,234 - CA264_09390 0.55 -0.4 2,196,354 + CA264_09390 0.67 -0.1 2,196,355 - CA264_09390 0.67 -1.1 2,196,548 - CA264_09390 0.88 -0.3 2,196,606 - +0.6 2,196,664 + -1.9 2,196,664 + +2.1 2,196,664 + -0.2 2,196,664 + -0.4 2,196,664 + -0.1 2,196,669 + +1.8 2,196,669 + -0.8 2,196,669 + +1.6 2,196,677 + -0.1 2,196,677 + +1.9 2,196,677 + +0.1 2,196,678 - +0.4 2,196,699 + -0.1 2,196,699 + +0.7 2,196,700 - -1.4 2,196,702 - -0.2 2,196,702 - +0.6 2,196,825 + CA264_09395 0.12 +0.8 2,196,826 - CA264_09395 0.12 -0.5 2,196,946 - CA264_09395 0.32 +0.9 2,197,036 + CA264_09395 0.46 -1.1 2,197,056 + CA264_09395 0.49 -0.3 2,197,127 + CA264_09395 0.61 -1.3 2,197,129 + CA264_09395 0.61 -0.3 2,197,129 + CA264_09395 0.61 +0.2 2,197,129 + CA264_09395 0.61 -0.4 2,197,130 - CA264_09395 0.61 -0.4 2,197,213 + CA264_09395 0.74 +0.4 2,197,337 - -1.5 2,197,367 + -0.4 2,197,367 + -0.6 2,197,372 + +0.1 2,197,372 + -0.4 2,197,373 - -2.5 2,197,373 - +0.3 2,197,444 - +2.2 2,197,512 - CA264_09400 0.30 -1.8 2,197,519 + CA264_09400 0.33 +0.4 2,197,519 + CA264_09400 0.33 +0.0 2,197,520 - CA264_09400 0.33 -1.2 2,197,520 - CA264_09400 0.33 +0.1 2,197,575 + CA264_09400 0.57 -0.2 2,197,575 + CA264_09400 0.57 -0.9 2,197,576 - CA264_09400 0.58 -0.2 2,197,642 + CA264_09400 0.87 -1.0
Or see this region's nucleotide sequence