Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02710

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02705 and CA264_02710 are separated by 250 nucleotidesCA264_02710 and CA264_02715 are separated by 17 nucleotidesCA264_02715 and CA264_02720 are separated by 153 nucleotides CA264_02705: CA264_02705 - hypothetical protein, at 623,915 to 624,976 _02705 CA264_02710: CA264_02710 - hypothetical protein, at 625,227 to 626,603 _02710 CA264_02715: CA264_02715 - UDP-glucose--dolichyl-phosphate glucosyltransferase, at 626,621 to 627,313 _02715 CA264_02720: CA264_02720 - peroxiredoxin, at 627,467 to 627,955 _02720 Position (kb) 625 626 627Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 624.242 kb on + strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.251 kb on - strand, within CA264_02705at 624.253 kb on - strand, within CA264_02705at 624.279 kb on + strand, within CA264_02705at 624.280 kb on - strand, within CA264_02705at 624.322 kb on + strand, within CA264_02705at 624.323 kb on - strand, within CA264_02705at 624.323 kb on - strand, within CA264_02705at 624.324 kb on + strand, within CA264_02705at 624.325 kb on - strand, within CA264_02705at 624.325 kb on - strand, within CA264_02705at 624.345 kb on - strand, within CA264_02705at 624.373 kb on - strand, within CA264_02705at 624.424 kb on - strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.428 kb on - strand, within CA264_02705at 624.428 kb on - strand, within CA264_02705at 624.432 kb on + strand, within CA264_02705at 624.490 kb on - strand, within CA264_02705at 624.532 kb on + strand, within CA264_02705at 624.533 kb on - strand, within CA264_02705at 624.549 kb on + strand, within CA264_02705at 624.549 kb on + strand, within CA264_02705at 624.608 kb on + strand, within CA264_02705at 624.654 kb on + strand, within CA264_02705at 624.654 kb on + strand, within CA264_02705at 624.654 kb on + strand, within CA264_02705at 624.692 kb on + strand, within CA264_02705at 624.693 kb on - strand, within CA264_02705at 624.694 kb on + strand, within CA264_02705at 624.695 kb on - strand, within CA264_02705at 624.695 kb on - strand, within CA264_02705at 624.697 kb on + strand, within CA264_02705at 624.698 kb on - strand, within CA264_02705at 624.698 kb on - strand, within CA264_02705at 624.753 kb on - strand, within CA264_02705at 624.810 kb on + strand, within CA264_02705at 624.832 kb on - strand, within CA264_02705at 624.835 kb on + strand, within CA264_02705at 624.836 kb on - strand, within CA264_02705at 624.836 kb on - strand, within CA264_02705at 624.840 kb on - strand, within CA264_02705at 624.888 kb on + strandat 624.890 kb on + strandat 624.890 kb on + strandat 624.891 kb on - strandat 624.891 kb on - strandat 624.891 kb on - strandat 624.891 kb on - strandat 624.933 kb on + strandat 624.946 kb on + strandat 624.953 kb on + strandat 624.954 kb on - strandat 624.981 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 625.003 kb on - strandat 625.003 kb on - strandat 625.022 kb on - strandat 625.097 kb on - strandat 625.146 kb on - strandat 625.149 kb on + strandat 625.150 kb on - strandat 625.150 kb on - strandat 625.192 kb on - strandat 625.192 kb on - strandat 625.192 kb on - strandat 625.279 kb on + strandat 625.372 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.380 kb on + strand, within CA264_02710at 625.380 kb on + strand, within CA264_02710at 625.381 kb on - strand, within CA264_02710at 625.401 kb on - strand, within CA264_02710at 625.453 kb on + strand, within CA264_02710at 625.487 kb on - strand, within CA264_02710at 625.495 kb on - strand, within CA264_02710at 625.508 kb on + strand, within CA264_02710at 625.508 kb on + strand, within CA264_02710at 625.510 kb on + strand, within CA264_02710at 625.566 kb on - strand, within CA264_02710at 625.611 kb on - strand, within CA264_02710at 625.654 kb on + strand, within CA264_02710at 625.654 kb on + strand, within CA264_02710at 625.654 kb on + strand, within CA264_02710at 625.655 kb on - strand, within CA264_02710at 625.657 kb on + strand, within CA264_02710at 625.657 kb on + strand, within CA264_02710at 625.658 kb on - strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.691 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.703 kb on + strand, within CA264_02710at 625.753 kb on - strand, within CA264_02710at 625.782 kb on - strand, within CA264_02710at 625.783 kb on + strand, within CA264_02710at 625.901 kb on - strand, within CA264_02710at 625.903 kb on + strand, within CA264_02710at 625.904 kb on - strand, within CA264_02710at 625.904 kb on - strand, within CA264_02710at 626.011 kb on + strand, within CA264_02710at 626.060 kb on + strand, within CA264_02710at 626.103 kb on + strand, within CA264_02710at 626.103 kb on + strand, within CA264_02710at 626.104 kb on - strand, within CA264_02710at 626.182 kb on + strand, within CA264_02710at 626.183 kb on - strand, within CA264_02710at 626.186 kb on - strand, within CA264_02710at 626.199 kb on + strand, within CA264_02710at 626.199 kb on + strand, within CA264_02710at 626.260 kb on + strand, within CA264_02710at 626.260 kb on + strand, within CA264_02710at 626.278 kb on + strand, within CA264_02710at 626.279 kb on - strand, within CA264_02710at 626.286 kb on + strand, within CA264_02710at 626.329 kb on + strand, within CA264_02710at 626.330 kb on - strand, within CA264_02710at 626.330 kb on - strand, within CA264_02710at 626.429 kb on - strand, within CA264_02710at 626.456 kb on - strand, within CA264_02710at 626.497 kb on + strandat 626.512 kb on + strandat 626.513 kb on - strandat 626.542 kb on + strandat 626.628 kb on + strandat 626.632 kb on + strandat 626.632 kb on + strandat 626.632 kb on + strandat 626.633 kb on - strandat 626.633 kb on - strandat 626.636 kb on + strandat 626.637 kb on - strandat 626.637 kb on - strandat 626.654 kb on - strandat 626.655 kb on + strandat 626.678 kb on + strandat 626.874 kb on + strand, within CA264_02715at 626.874 kb on + strand, within CA264_02715at 626.875 kb on - strand, within CA264_02715at 626.969 kb on + strand, within CA264_02715at 627.014 kb on + strand, within CA264_02715at 627.100 kb on - strand, within CA264_02715at 627.210 kb on - strand, within CA264_02715at 627.283 kb on - strandat 627.302 kb on + strandat 627.313 kb on + strandat 627.314 kb on - strandat 627.323 kb on - strandat 627.341 kb on + strandat 627.364 kb on - strandat 627.403 kb on - strandat 627.420 kb on + strandat 627.440 kb on + strandat 627.449 kb on + strandat 627.581 kb on + strand, within CA264_02720at 627.587 kb on + strand, within CA264_02720at 627.592 kb on + strand, within CA264_02720at 627.593 kb on - strand, within CA264_02720

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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624,242 + CA264_02705 0.31 -1.8
624,243 - CA264_02705 0.31 -0.7
624,243 - CA264_02705 0.31 +0.0
624,243 - CA264_02705 0.31 -1.1
624,243 - CA264_02705 0.31 +0.1
624,243 - CA264_02705 0.31 -0.5
624,243 - CA264_02705 0.31 +0.3
624,251 - CA264_02705 0.32 -1.6
624,253 - CA264_02705 0.32 +0.4
624,279 + CA264_02705 0.34 -0.4
624,280 - CA264_02705 0.34 -0.2
624,322 + CA264_02705 0.38 -0.9
624,323 - CA264_02705 0.38 -0.5
624,323 - CA264_02705 0.38 +0.0
624,324 + CA264_02705 0.39 -1.8
624,325 - CA264_02705 0.39 +0.0
624,325 - CA264_02705 0.39 -0.2
624,345 - CA264_02705 0.40 +0.1
624,373 - CA264_02705 0.43 +0.2
624,424 - CA264_02705 0.48 -0.2
624,427 + CA264_02705 0.48 -1.8
624,427 + CA264_02705 0.48 -0.6
624,427 + CA264_02705 0.48 -0.6
624,427 + CA264_02705 0.48 -0.5
624,428 - CA264_02705 0.48 -1.0
624,428 - CA264_02705 0.48 +0.4
624,432 + CA264_02705 0.49 -1.7
624,490 - CA264_02705 0.54 -0.2
624,532 + CA264_02705 0.58 -0.4
624,533 - CA264_02705 0.58 -0.1
624,549 + CA264_02705 0.60 +0.5
624,549 + CA264_02705 0.60 +0.5
624,608 + CA264_02705 0.65 -0.6
624,654 + CA264_02705 0.70 -0.1
624,654 + CA264_02705 0.70 -0.3
624,654 + CA264_02705 0.70 -0.3
624,692 + CA264_02705 0.73 -0.5
624,693 - CA264_02705 0.73 +0.3
624,694 + CA264_02705 0.73 -1.0
624,695 - CA264_02705 0.73 +1.5
624,695 - CA264_02705 0.73 -0.6
624,697 + CA264_02705 0.74 +0.2
624,698 - CA264_02705 0.74 -0.9
624,698 - CA264_02705 0.74 +0.2
624,753 - CA264_02705 0.79 -2.8
624,810 + CA264_02705 0.84 -0.3
624,832 - CA264_02705 0.86 +0.1
624,835 + CA264_02705 0.87 +0.1
624,836 - CA264_02705 0.87 +0.5
624,836 - CA264_02705 0.87 +0.4
624,840 - CA264_02705 0.87 +0.4
624,888 + -0.6
624,890 + +1.0
624,890 + -0.3
624,891 - -0.5
624,891 - -0.2
624,891 - -0.6
624,891 - +0.7
624,933 + -0.1
624,946 + -1.1
624,953 + +0.1
624,954 - -0.5
624,981 + -0.3
624,991 + -1.3
624,991 + -0.3
624,991 + -0.4
624,991 + -0.8
624,991 + -0.1
625,003 - -0.5
625,003 - -0.5
625,022 - -0.1
625,097 - +0.5
625,146 - +0.2
625,149 + -1.0
625,150 - -0.3
625,150 - -1.5
625,192 - -0.2
625,192 - -0.4
625,192 - -0.9
625,279 + -0.3
625,372 + CA264_02710 0.11 -0.3
625,376 + CA264_02710 0.11 -0.2
625,376 + CA264_02710 0.11 -1.7
625,376 + CA264_02710 0.11 +0.1
625,376 + CA264_02710 0.11 -0.7
625,380 + CA264_02710 0.11 -0.1
625,380 + CA264_02710 0.11 -0.4
625,381 - CA264_02710 0.11 +0.3
625,401 - CA264_02710 0.13 -0.8
625,453 + CA264_02710 0.16 -0.6
625,487 - CA264_02710 0.19 -0.8
625,495 - CA264_02710 0.19 -1.2
625,508 + CA264_02710 0.20 -1.1
625,508 + CA264_02710 0.20 -1.0
625,510 + CA264_02710 0.21 -1.2
625,566 - CA264_02710 0.25 -0.7
625,611 - CA264_02710 0.28 +0.4
625,654 + CA264_02710 0.31 +0.2
625,654 + CA264_02710 0.31 +1.1
625,654 + CA264_02710 0.31 -0.9
625,655 - CA264_02710 0.31 +1.8
625,657 + CA264_02710 0.31 -0.1
625,657 + CA264_02710 0.31 +0.9
625,658 - CA264_02710 0.31 -0.5
625,659 + CA264_02710 0.31 -1.3
625,659 + CA264_02710 0.31 +0.6
625,659 + CA264_02710 0.31 -1.6
625,659 + CA264_02710 0.31 -0.5
625,660 - CA264_02710 0.31 +0.2
625,660 - CA264_02710 0.31 +0.3
625,660 - CA264_02710 0.31 +0.4
625,660 - CA264_02710 0.31 -1.0
625,660 - CA264_02710 0.31 -1.7
625,660 - CA264_02710 0.31 -0.1
625,660 - CA264_02710 0.31 +0.1
625,691 - CA264_02710 0.34 -0.2
625,701 - CA264_02710 0.34 -1.0
625,701 - CA264_02710 0.34 -0.3
625,701 - CA264_02710 0.34 +1.6
625,701 - CA264_02710 0.34 +0.2
625,701 - CA264_02710 0.34 +0.2
625,703 + CA264_02710 0.35 -1.0
625,753 - CA264_02710 0.38 -0.4
625,782 - CA264_02710 0.40 +0.6
625,783 + CA264_02710 0.40 -0.3
625,901 - CA264_02710 0.49 -0.3
625,903 + CA264_02710 0.49 -1.1
625,904 - CA264_02710 0.49 -0.9
625,904 - CA264_02710 0.49 +0.9
626,011 + CA264_02710 0.57 -0.8
626,060 + CA264_02710 0.60 -0.1
626,103 + CA264_02710 0.64 -0.7
626,103 + CA264_02710 0.64 -0.9
626,104 - CA264_02710 0.64 -1.3
626,182 + CA264_02710 0.69 -1.4
626,183 - CA264_02710 0.69 -0.2
626,186 - CA264_02710 0.70 -0.5
626,199 + CA264_02710 0.71 -1.5
626,199 + CA264_02710 0.71 -0.1
626,260 + CA264_02710 0.75 -0.5
626,260 + CA264_02710 0.75 -0.9
626,278 + CA264_02710 0.76 +0.1
626,279 - CA264_02710 0.76 +1.7
626,286 + CA264_02710 0.77 -1.5
626,329 + CA264_02710 0.80 +0.0
626,330 - CA264_02710 0.80 -1.1
626,330 - CA264_02710 0.80 +0.9
626,429 - CA264_02710 0.87 -0.7
626,456 - CA264_02710 0.89 -0.2
626,497 + +1.3
626,512 + -1.5
626,513 - +1.1
626,542 + -0.8
626,628 + +0.6
626,632 + -0.9
626,632 + -1.0
626,632 + -1.9
626,633 - -1.9
626,633 - -0.7
626,636 + -0.1
626,637 - -2.4
626,637 - -1.2
626,654 - -0.5
626,655 + -0.9
626,678 + -0.9
626,874 + CA264_02715 0.37 -0.5
626,874 + CA264_02715 0.37 -0.1
626,875 - CA264_02715 0.37 -1.1
626,969 + CA264_02715 0.50 -0.9
627,014 + CA264_02715 0.57 -1.2
627,100 - CA264_02715 0.69 +1.5
627,210 - CA264_02715 0.85 -1.3
627,283 - +0.5
627,302 + +0.1
627,313 + -1.0
627,314 - -0.2
627,323 - -0.5
627,341 + -1.9
627,364 - +0.3
627,403 - -0.8
627,420 + -0.6
627,440 + +0.3
627,449 + -0.5
627,581 + CA264_02720 0.23 +0.4
627,587 + CA264_02720 0.25 +0.7
627,592 + CA264_02720 0.26 -1.0
627,593 - CA264_02720 0.26 -0.0

Or see this region's nucleotide sequence