Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00395 and CA264_00400 are separated by 276 nucleotides CA264_00400 and CA264_00405 are separated by 29 nucleotides CA264_00405 and CA264_00410 are separated by 158 nucleotides
CA264_00395: CA264_00395 - SAM-dependent methyltransferase, at 87,133 to 87,759
_00395
CA264_00400: CA264_00400 - alkyl hydroperoxide reductase, at 88,036 to 88,674
_00400
CA264_00405: CA264_00405 - transcriptional repressor, at 88,704 to 89,168
_00405
CA264_00410: CA264_00410 - enoyl-CoA hydratase, at 89,327 to 90,100
_00410
Position (kb)
88
89
90 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 87.781 kb on + strand at 87.782 kb on - strand at 87.782 kb on - strand at 87.782 kb on - strand at 87.826 kb on - strand at 87.826 kb on - strand at 87.826 kb on - strand at 87.937 kb on - strand at 87.961 kb on - strand at 88.018 kb on + strand at 88.062 kb on - strand at 88.065 kb on + strand at 88.069 kb on + strand at 88.093 kb on - strand at 88.226 kb on - strand, within CA264_00400 at 88.280 kb on - strand, within CA264_00400 at 88.348 kb on - strand, within CA264_00400 at 88.376 kb on + strand, within CA264_00400 at 88.551 kb on - strand, within CA264_00400 at 88.663 kb on + strand at 88.663 kb on + strand at 88.663 kb on + strand at 88.722 kb on - strand at 88.728 kb on + strand at 88.729 kb on - strand at 89.036 kb on - strand, within CA264_00405 at 89.114 kb on + strand, within CA264_00405 at 89.142 kb on + strand at 89.198 kb on - strand at 89.224 kb on + strand at 89.229 kb on + strand at 89.230 kb on - strand at 89.263 kb on + strand at 89.263 kb on + strand at 89.264 kb on - strand at 89.265 kb on + strand at 89.288 kb on + strand at 89.289 kb on - strand at 89.309 kb on + strand at 89.310 kb on - strand at 89.321 kb on - strand at 89.410 kb on - strand, within CA264_00410 at 89.547 kb on + strand, within CA264_00410 at 89.547 kb on + strand, within CA264_00410 at 89.609 kb on - strand, within CA264_00410 at 89.609 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.821 kb on + strand, within CA264_00410 at 89.821 kb on + strand, within CA264_00410 at 89.822 kb on - strand, within CA264_00410 at 90.089 kb on + strand at 90.090 kb on - strand at 90.103 kb on + strand at 90.104 kb on - strand at 90.104 kb on - strand at 90.104 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 87,781 + +0.2 87,782 - +0.0 87,782 - -0.1 87,782 - -0.9 87,826 - +0.4 87,826 - -2.1 87,826 - -0.3 87,937 - -0.3 87,961 - -0.3 88,018 + -1.1 88,062 - -0.8 88,065 + -1.1 88,069 + -0.7 88,093 - -2.3 88,226 - CA264_00400 0.30 -1.1 88,280 - CA264_00400 0.38 -1.2 88,348 - CA264_00400 0.49 -1.9 88,376 + CA264_00400 0.53 -2.6 88,551 - CA264_00400 0.81 -0.1 88,663 + -1.2 88,663 + -0.8 88,663 + -2.1 88,722 - -0.9 88,728 + -0.4 88,729 - -0.6 89,036 - CA264_00405 0.71 +0.1 89,114 + CA264_00405 0.88 +0.2 89,142 + -0.2 89,198 - +0.6 89,224 + +0.2 89,229 + -0.3 89,230 - +0.4 89,263 + -0.2 89,263 + +0.3 89,264 - -0.1 89,265 + -3.0 89,288 + -0.1 89,289 - -0.9 89,309 + +0.3 89,310 - -0.1 89,321 - -1.8 89,410 - CA264_00410 0.11 -0.4 89,547 + CA264_00410 0.28 -1.2 89,547 + CA264_00410 0.28 +0.4 89,609 - CA264_00410 0.36 -0.0 89,609 - CA264_00410 0.36 +1.1 89,705 - CA264_00410 0.49 -0.3 89,705 - CA264_00410 0.49 -0.6 89,705 - CA264_00410 0.49 +0.8 89,705 - CA264_00410 0.49 -0.2 89,821 + CA264_00410 0.64 -0.8 89,821 + CA264_00410 0.64 +1.2 89,822 - CA264_00410 0.64 +0.7 90,089 + -1.4 90,090 - -0.3 90,103 + -0.4 90,104 - +0.4 90,104 - -0.8 90,104 - +0.4
Or see this region's nucleotide sequence