Strain Fitness in Bosea sp. OAE506 around ABIE41_RS01645

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS01640 and ABIE41_RS01645 overlap by 23 nucleotidesABIE41_RS01645 and ABIE41_RS01650 are separated by 153 nucleotides ABIE41_RS01640: ABIE41_RS01640 - LysR substrate-binding domain-containing protein, at 330,261 to 331,184 _RS01640 ABIE41_RS01645: ABIE41_RS01645 - TIGR00730 family Rossman fold protein, at 331,162 to 331,740 _RS01645 ABIE41_RS01650: ABIE41_RS01650 - acetamidase/formamidase family protein, at 331,894 to 332,835 _RS01650 Position (kb) 331 332Strain fitness (log2 ratio) -2 -1 0 1 2 3at 330.180 kb on + strandat 330.285 kb on + strandat 330.285 kb on + strandat 330.285 kb on + strandat 330.285 kb on + strandat 330.285 kb on + strandat 330.286 kb on - strandat 330.286 kb on - strandat 330.286 kb on - strandat 330.286 kb on - strandat 330.286 kb on - strandat 330.286 kb on - strandat 330.286 kb on - strandat 330.286 kb on - strandat 330.288 kb on - strandat 330.678 kb on + strand, within ABIE41_RS01640at 330.678 kb on + strand, within ABIE41_RS01640at 330.829 kb on - strand, within ABIE41_RS01640at 330.854 kb on + strand, within ABIE41_RS01640at 330.855 kb on + strand, within ABIE41_RS01640at 330.855 kb on + strand, within ABIE41_RS01640at 330.856 kb on - strand, within ABIE41_RS01640at 330.856 kb on - strand, within ABIE41_RS01640at 330.856 kb on - strand, within ABIE41_RS01640at 330.856 kb on - strand, within ABIE41_RS01640at 330.856 kb on - strand, within ABIE41_RS01640at 330.856 kb on - strand, within ABIE41_RS01640at 330.856 kb on - strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.951 kb on + strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 330.952 kb on - strand, within ABIE41_RS01640at 331.163 kb on + strandat 331.164 kb on - strandat 331.164 kb on - strandat 331.313 kb on + strand, within ABIE41_RS01645at 331.314 kb on - strand, within ABIE41_RS01645at 331.314 kb on - strand, within ABIE41_RS01645at 331.314 kb on - strand, within ABIE41_RS01645at 331.314 kb on - strand, within ABIE41_RS01645at 331.314 kb on - strand, within ABIE41_RS01645at 331.316 kb on + strand, within ABIE41_RS01645at 331.317 kb on - strand, within ABIE41_RS01645at 331.602 kb on + strand, within ABIE41_RS01645at 331.602 kb on + strand, within ABIE41_RS01645at 331.602 kb on + strand, within ABIE41_RS01645at 331.603 kb on - strand, within ABIE41_RS01645at 331.617 kb on - strand, within ABIE41_RS01645at 331.617 kb on - strand, within ABIE41_RS01645at 331.830 kb on + strandat 331.830 kb on + strandat 331.830 kb on + strandat 331.830 kb on + strandat 331.831 kb on - strandat 331.831 kb on - strandat 331.831 kb on - strandat 331.831 kb on - strandat 331.831 kb on - strandat 331.940 kb on - strandat 331.940 kb on - strandat 332.106 kb on + strand, within ABIE41_RS01650at 332.107 kb on - strand, within ABIE41_RS01650at 332.200 kb on + strand, within ABIE41_RS01650at 332.200 kb on + strand, within ABIE41_RS01650at 332.200 kb on + strand, within ABIE41_RS01650at 332.200 kb on + strand, within ABIE41_RS01650at 332.201 kb on - strand, within ABIE41_RS01650at 332.201 kb on - strand, within ABIE41_RS01650at 332.201 kb on - strand, within ABIE41_RS01650at 332.201 kb on - strand, within ABIE41_RS01650at 332.201 kb on - strand, within ABIE41_RS01650at 332.449 kb on + strand, within ABIE41_RS01650at 332.449 kb on + strand, within ABIE41_RS01650at 332.450 kb on - strand, within ABIE41_RS01650at 332.450 kb on - strand, within ABIE41_RS01650at 332.556 kb on + strand, within ABIE41_RS01650at 332.556 kb on + strand, within ABIE41_RS01650at 332.557 kb on - strand, within ABIE41_RS01650at 332.557 kb on - strand, within ABIE41_RS01650at 332.557 kb on - strand, within ABIE41_RS01650at 332.557 kb on - strand, within ABIE41_RS01650at 332.557 kb on - strand, within ABIE41_RS01650at 332.597 kb on - strand, within ABIE41_RS01650at 332.732 kb on - strand, within ABIE41_RS01650at 332.732 kb on - strand, within ABIE41_RS01650

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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330,180 + -0.4
330,285 + -0.5
330,285 + +1.0
330,285 + -0.1
330,285 + +0.6
330,285 + -2.1
330,286 - +0.2
330,286 - -0.5
330,286 - -0.2
330,286 - -1.2
330,286 - -0.4
330,286 - +0.1
330,286 - -2.3
330,286 - -0.5
330,288 - +0.7
330,678 + ABIE41_RS01640 0.45 +1.3
330,678 + ABIE41_RS01640 0.45 -0.5
330,829 - ABIE41_RS01640 0.61 +1.5
330,854 + ABIE41_RS01640 0.64 -0.6
330,855 + ABIE41_RS01640 0.64 +0.4
330,855 + ABIE41_RS01640 0.64 +1.6
330,856 - ABIE41_RS01640 0.64 -0.1
330,856 - ABIE41_RS01640 0.64 +0.1
330,856 - ABIE41_RS01640 0.64 +0.4
330,856 - ABIE41_RS01640 0.64 -0.8
330,856 - ABIE41_RS01640 0.64 -0.2
330,856 - ABIE41_RS01640 0.64 -0.1
330,856 - ABIE41_RS01640 0.64 -1.2
330,951 + ABIE41_RS01640 0.75 -0.5
330,951 + ABIE41_RS01640 0.75 +0.3
330,951 + ABIE41_RS01640 0.75 -1.6
330,951 + ABIE41_RS01640 0.75 +0.8
330,951 + ABIE41_RS01640 0.75 -2.4
330,951 + ABIE41_RS01640 0.75 +0.1
330,951 + ABIE41_RS01640 0.75 +0.6
330,951 + ABIE41_RS01640 0.75 -1.1
330,951 + ABIE41_RS01640 0.75 -0.9
330,951 + ABIE41_RS01640 0.75 +0.8
330,952 - ABIE41_RS01640 0.75 +1.4
330,952 - ABIE41_RS01640 0.75 -0.8
330,952 - ABIE41_RS01640 0.75 -1.5
330,952 - ABIE41_RS01640 0.75 +0.2
330,952 - ABIE41_RS01640 0.75 -0.2
330,952 - ABIE41_RS01640 0.75 -0.2
330,952 - ABIE41_RS01640 0.75 +0.4
330,952 - ABIE41_RS01640 0.75 +2.8
331,163 + -1.6
331,164 - +0.1
331,164 - +1.1
331,313 + ABIE41_RS01645 0.26 -1.7
331,314 - ABIE41_RS01645 0.26 +1.4
331,314 - ABIE41_RS01645 0.26 +0.8
331,314 - ABIE41_RS01645 0.26 -0.5
331,314 - ABIE41_RS01645 0.26 -0.9
331,314 - ABIE41_RS01645 0.26 +0.4
331,316 + ABIE41_RS01645 0.27 -1.4
331,317 - ABIE41_RS01645 0.27 -0.6
331,602 + ABIE41_RS01645 0.76 -2.1
331,602 + ABIE41_RS01645 0.76 +0.1
331,602 + ABIE41_RS01645 0.76 -1.6
331,603 - ABIE41_RS01645 0.76 +0.1
331,617 - ABIE41_RS01645 0.79 +0.4
331,617 - ABIE41_RS01645 0.79 +0.5
331,830 + -0.8
331,830 + +0.7
331,830 + -1.0
331,830 + -0.5
331,831 - +0.5
331,831 - +1.1
331,831 - +0.2
331,831 - +0.8
331,831 - +1.8
331,940 - +0.1
331,940 - +0.7
332,106 + ABIE41_RS01650 0.23 -0.3
332,107 - ABIE41_RS01650 0.23 +0.1
332,200 + ABIE41_RS01650 0.32 -0.0
332,200 + ABIE41_RS01650 0.32 -0.5
332,200 + ABIE41_RS01650 0.32 -0.7
332,200 + ABIE41_RS01650 0.32 -0.2
332,201 - ABIE41_RS01650 0.33 +0.4
332,201 - ABIE41_RS01650 0.33 -1.0
332,201 - ABIE41_RS01650 0.33 -0.7
332,201 - ABIE41_RS01650 0.33 +0.2
332,201 - ABIE41_RS01650 0.33 -0.3
332,449 + ABIE41_RS01650 0.59 -0.1
332,449 + ABIE41_RS01650 0.59 +0.2
332,450 - ABIE41_RS01650 0.59 +0.1
332,450 - ABIE41_RS01650 0.59 -0.4
332,556 + ABIE41_RS01650 0.70 -0.2
332,556 + ABIE41_RS01650 0.70 +0.3
332,557 - ABIE41_RS01650 0.70 -1.4
332,557 - ABIE41_RS01650 0.70 -0.5
332,557 - ABIE41_RS01650 0.70 -0.4
332,557 - ABIE41_RS01650 0.70 -0.3
332,557 - ABIE41_RS01650 0.70 -0.0
332,597 - ABIE41_RS01650 0.75 +0.8
332,732 - ABIE41_RS01650 0.89 -0.6
332,732 - ABIE41_RS01650 0.89 +0.4

Or see this region's nucleotide sequence