Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS28740 and ABID97_RS28745 are separated by 84 nucleotides ABID97_RS28745 and ABID97_RS28750 are separated by 2 nucleotides
ABID97_RS28740: ABID97_RS28740 - NADH:flavin oxidoreductase/NADH oxidase, at 664,484 to 665,599
_RS28740
ABID97_RS28745: ABID97_RS28745 - GMC family oxidoreductase N-terminal domain-containing protein, at 665,684 to 667,282
_RS28745
ABID97_RS28750: ABID97_RS28750 - FAD-binding oxidoreductase, at 667,285 to 668,685
_RS28750
Position (kb) 665
666
667
668 Strain fitness (log2 ratio) -1
0
1 at 664.758 kb on + strand, within ABID97_RS28740 at 664.759 kb on - strand, within ABID97_RS28740 at 665.053 kb on - strand, within ABID97_RS28740 at 665.379 kb on + strand, within ABID97_RS28740 at 665.686 kb on - strand at 665.887 kb on - strand, within ABID97_RS28745 at 666.199 kb on - strand, within ABID97_RS28745 at 666.199 kb on - strand, within ABID97_RS28745 at 666.315 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.463 kb on - strand, within ABID97_RS28745 at 666.739 kb on - strand, within ABID97_RS28745 at 666.999 kb on + strand, within ABID97_RS28745 at 666.999 kb on + strand, within ABID97_RS28745 at 666.999 kb on + strand, within ABID97_RS28745 at 667.000 kb on - strand, within ABID97_RS28745 at 667.266 kb on + strand at 667.266 kb on + strand at 667.266 kb on + strand at 667.266 kb on + strand at 667.266 kb on + strand at 667.267 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 664,758 + ABID97_RS28740 0.25 -0.7 664,759 - ABID97_RS28740 0.25 -0.6 665,053 - ABID97_RS28740 0.51 +0.9 665,379 + ABID97_RS28740 0.80 +1.5 665,686 - +0.3 665,887 - ABID97_RS28745 0.13 -0.7 666,199 - ABID97_RS28745 0.32 +0.1 666,199 - ABID97_RS28745 0.32 +0.0 666,315 + ABID97_RS28745 0.39 -0.1 666,417 + ABID97_RS28745 0.46 -0.8 666,417 + ABID97_RS28745 0.46 -1.3 666,417 + ABID97_RS28745 0.46 +0.2 666,417 + ABID97_RS28745 0.46 -0.3 666,463 - ABID97_RS28745 0.49 -0.9 666,739 - ABID97_RS28745 0.66 -0.7 666,999 + ABID97_RS28745 0.82 -1.0 666,999 + ABID97_RS28745 0.82 -0.3 666,999 + ABID97_RS28745 0.82 -0.2 667,000 - ABID97_RS28745 0.82 +0.0 667,266 + -0.3 667,266 + -1.1 667,266 + +0.3 667,266 + -0.3 667,266 + -0.5 667,267 - -0.3
Or see this region's nucleotide sequence