Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24365 and ABID97_RS24370 are separated by 275 nucleotides ABID97_RS24370 and ABID97_RS24375 are separated by 19 nucleotides
ABID97_RS24365: ABID97_RS24365 - hypothetical protein, at 5,040,954 to 5,044,469
_RS24365
ABID97_RS24370: ABID97_RS24370 - DUF1841 family protein, at 5,044,745 to 5,045,179
_RS24370
ABID97_RS24375: ABID97_RS24375 - LysR substrate-binding domain-containing protein, at 5,045,199 to 5,046,194
_RS24375
Position (kb) 5044
5045
5046 Strain fitness (log2 ratio) -2
-1
0
1 at 5044.295 kb on + strand at 5044.296 kb on - strand at 5044.497 kb on + strand at 5044.497 kb on + strand at 5044.654 kb on - strand at 5044.661 kb on + strand at 5044.661 kb on + strand at 5044.738 kb on + strand at 5044.738 kb on + strand at 5044.738 kb on + strand at 5044.738 kb on + strand at 5044.739 kb on - strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.740 kb on + strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.741 kb on - strand at 5044.744 kb on + strand at 5044.744 kb on + strand at 5044.744 kb on + strand at 5044.745 kb on - strand at 5044.745 kb on - strand at 5044.745 kb on - strand at 5044.793 kb on + strand, within ABID97_RS24370 at 5044.793 kb on + strand, within ABID97_RS24370 at 5044.794 kb on - strand, within ABID97_RS24370 at 5044.794 kb on - strand, within ABID97_RS24370 at 5044.916 kb on + strand, within ABID97_RS24370 at 5044.916 kb on + strand, within ABID97_RS24370 at 5044.917 kb on - strand, within ABID97_RS24370 at 5045.142 kb on - strand at 5045.177 kb on + strand at 5045.177 kb on + strand at 5045.177 kb on + strand at 5045.177 kb on + strand at 5045.178 kb on - strand at 5045.548 kb on + strand, within ABID97_RS24375 at 5045.548 kb on + strand, within ABID97_RS24375 at 5045.549 kb on - strand, within ABID97_RS24375 at 5045.549 kb on - strand, within ABID97_RS24375 at 5045.549 kb on - strand, within ABID97_RS24375 at 5045.651 kb on + strand, within ABID97_RS24375 at 5045.652 kb on - strand, within ABID97_RS24375 at 5045.652 kb on - strand, within ABID97_RS24375 at 5045.653 kb on + strand, within ABID97_RS24375 at 5045.653 kb on + strand, within ABID97_RS24375 at 5045.654 kb on - strand, within ABID97_RS24375
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,044,295 + -1.7 5,044,296 - +0.0 5,044,497 + +0.3 5,044,497 + -0.1 5,044,654 - -0.6 5,044,661 + +0.5 5,044,661 + +0.0 5,044,738 + -1.7 5,044,738 + -0.0 5,044,738 + -0.7 5,044,738 + +0.6 5,044,739 - -2.2 5,044,740 + -0.0 5,044,740 + +0.4 5,044,740 + +0.4 5,044,740 + +0.4 5,044,740 + +0.7 5,044,740 + -0.0 5,044,740 + -2.2 5,044,740 + -0.2 5,044,740 + -0.4 5,044,741 - -0.3 5,044,741 - -0.2 5,044,741 - -0.6 5,044,741 - -0.3 5,044,741 - -1.4 5,044,741 - -0.3 5,044,741 - -0.9 5,044,741 - +0.2 5,044,741 - +0.8 5,044,741 - -0.9 5,044,744 + +0.2 5,044,744 + -0.6 5,044,744 + -0.2 5,044,745 - +0.2 5,044,745 - +0.0 5,044,745 - -0.3 5,044,793 + ABID97_RS24370 0.11 +0.5 5,044,793 + ABID97_RS24370 0.11 -2.3 5,044,794 - ABID97_RS24370 0.11 +0.6 5,044,794 - ABID97_RS24370 0.11 +0.8 5,044,916 + ABID97_RS24370 0.39 -1.0 5,044,916 + ABID97_RS24370 0.39 -2.2 5,044,917 - ABID97_RS24370 0.40 -1.6 5,045,142 - -1.4 5,045,177 + -0.0 5,045,177 + -0.1 5,045,177 + -0.3 5,045,177 + -1.0 5,045,178 - -0.0 5,045,548 + ABID97_RS24375 0.35 +0.3 5,045,548 + ABID97_RS24375 0.35 -0.4 5,045,549 - ABID97_RS24375 0.35 -2.1 5,045,549 - ABID97_RS24375 0.35 -0.3 5,045,549 - ABID97_RS24375 0.35 +0.6 5,045,651 + ABID97_RS24375 0.45 +0.4 5,045,652 - ABID97_RS24375 0.45 +0.8 5,045,652 - ABID97_RS24375 0.45 -0.1 5,045,653 + ABID97_RS24375 0.46 -0.1 5,045,653 + ABID97_RS24375 0.46 -0.1 5,045,654 - ABID97_RS24375 0.46 -0.0
Or see this region's nucleotide sequence