Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24020 and ABID97_RS24025 are separated by 22 nucleotides ABID97_RS24025 and ABID97_RS24030 are separated by 30 nucleotides
ABID97_RS24020: ABID97_RS24020 - feruloyl-CoA synthase, at 4,966,098 to 4,967,951
_RS24020
ABID97_RS24025: ABID97_RS24025 - SDR family NAD(P)-dependent oxidoreductase, at 4,967,974 to 4,968,738
_RS24025
ABID97_RS24030: ABID97_RS24030 - Bug family tripartite tricarboxylate transporter substrate binding protein, at 4,968,769 to 4,969,758
_RS24030
Position (kb)
4967
4968
4969 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4967.034 kb on + strand, within ABID97_RS24020 at 4967.034 kb on + strand, within ABID97_RS24020 at 4967.035 kb on - strand, within ABID97_RS24020 at 4967.133 kb on + strand, within ABID97_RS24020 at 4967.133 kb on + strand, within ABID97_RS24020 at 4967.260 kb on - strand, within ABID97_RS24020 at 4967.260 kb on - strand, within ABID97_RS24020 at 4967.592 kb on + strand, within ABID97_RS24020 at 4967.592 kb on + strand, within ABID97_RS24020 at 4967.592 kb on + strand, within ABID97_RS24020 at 4967.592 kb on + strand, within ABID97_RS24020 at 4967.593 kb on - strand, within ABID97_RS24020 at 4967.593 kb on - strand, within ABID97_RS24020 at 4967.593 kb on - strand, within ABID97_RS24020 at 4967.593 kb on - strand, within ABID97_RS24020 at 4967.593 kb on - strand, within ABID97_RS24020 at 4967.710 kb on + strand, within ABID97_RS24020 at 4968.451 kb on + strand, within ABID97_RS24025 at 4968.874 kb on + strand, within ABID97_RS24030 at 4968.875 kb on - strand, within ABID97_RS24030 at 4969.090 kb on + strand, within ABID97_RS24030 at 4969.090 kb on + strand, within ABID97_RS24030 at 4969.091 kb on - strand, within ABID97_RS24030 at 4969.091 kb on - strand, within ABID97_RS24030 at 4969.091 kb on - strand, within ABID97_RS24030 at 4969.092 kb on + strand, within ABID97_RS24030 at 4969.093 kb on - strand, within ABID97_RS24030 at 4969.207 kb on + strand, within ABID97_RS24030 at 4969.207 kb on + strand, within ABID97_RS24030 at 4969.207 kb on + strand, within ABID97_RS24030 at 4969.474 kb on + strand, within ABID97_RS24030 at 4969.475 kb on - strand, within ABID97_RS24030 at 4969.706 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,967,034 + ABID97_RS24020 0.50 -0.2 4,967,034 + ABID97_RS24020 0.50 -0.3 4,967,035 - ABID97_RS24020 0.51 -1.2 4,967,133 + ABID97_RS24020 0.56 -0.3 4,967,133 + ABID97_RS24020 0.56 -0.5 4,967,260 - ABID97_RS24020 0.63 -1.3 4,967,260 - ABID97_RS24020 0.63 -0.1 4,967,592 + ABID97_RS24020 0.81 -0.3 4,967,592 + ABID97_RS24020 0.81 -0.2 4,967,592 + ABID97_RS24020 0.81 +0.9 4,967,592 + ABID97_RS24020 0.81 -1.8 4,967,593 - ABID97_RS24020 0.81 +0.1 4,967,593 - ABID97_RS24020 0.81 +0.4 4,967,593 - ABID97_RS24020 0.81 -0.2 4,967,593 - ABID97_RS24020 0.81 +0.4 4,967,593 - ABID97_RS24020 0.81 +0.4 4,967,710 + ABID97_RS24020 0.87 +0.1 4,968,451 + ABID97_RS24025 0.62 +0.5 4,968,874 + ABID97_RS24030 0.11 +2.4 4,968,875 - ABID97_RS24030 0.11 -1.2 4,969,090 + ABID97_RS24030 0.32 -1.3 4,969,090 + ABID97_RS24030 0.32 -0.3 4,969,091 - ABID97_RS24030 0.33 +0.9 4,969,091 - ABID97_RS24030 0.33 -0.8 4,969,091 - ABID97_RS24030 0.33 +0.5 4,969,092 + ABID97_RS24030 0.33 -0.6 4,969,093 - ABID97_RS24030 0.33 +0.4 4,969,207 + ABID97_RS24030 0.44 -0.6 4,969,207 + ABID97_RS24030 0.44 -0.1 4,969,207 + ABID97_RS24030 0.44 -0.3 4,969,474 + ABID97_RS24030 0.71 +0.0 4,969,475 - ABID97_RS24030 0.71 +1.2 4,969,706 - -0.6
Or see this region's nucleotide sequence