Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS23245 and ABID97_RS23250 are separated by 47 nucleotides ABID97_RS23250 and ABID97_RS23255 are separated by 21 nucleotides
ABID97_RS23245: ABID97_RS23245 - MFS transporter, at 4,806,444 to 4,807,712
_RS23245
ABID97_RS23250: ABID97_RS23250 - deoxyguanosinetriphosphate triphosphohydrolase, at 4,807,760 to 4,808,890
_RS23250
ABID97_RS23255: ABID97_RS23255 - 3-dehydroquinate synthase, at 4,808,912 to 4,810,024
_RS23255
Position (kb) 4807
4808
4809 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4806.955 kb on + strand, within ABID97_RS23245 at 4806.955 kb on + strand, within ABID97_RS23245 at 4806.955 kb on + strand, within ABID97_RS23245 at 4806.955 kb on + strand, within ABID97_RS23245 at 4806.955 kb on + strand, within ABID97_RS23245 at 4806.956 kb on - strand, within ABID97_RS23245 at 4806.956 kb on - strand, within ABID97_RS23245 at 4807.000 kb on + strand, within ABID97_RS23245 at 4807.001 kb on - strand, within ABID97_RS23245 at 4807.255 kb on + strand, within ABID97_RS23245 at 4807.255 kb on + strand, within ABID97_RS23245 at 4807.255 kb on + strand, within ABID97_RS23245 at 4807.255 kb on + strand, within ABID97_RS23245 at 4807.255 kb on - strand, within ABID97_RS23245 at 4807.256 kb on - strand, within ABID97_RS23245 at 4807.256 kb on - strand, within ABID97_RS23245 at 4807.256 kb on - strand, within ABID97_RS23245 at 4807.256 kb on - strand, within ABID97_RS23245 at 4807.435 kb on - strand, within ABID97_RS23245 at 4807.834 kb on - strand at 4807.834 kb on - strand at 4807.873 kb on - strand, within ABID97_RS23250 at 4807.905 kb on + strand, within ABID97_RS23250 at 4808.125 kb on - strand, within ABID97_RS23250 at 4808.125 kb on - strand, within ABID97_RS23250 at 4808.125 kb on - strand, within ABID97_RS23250 at 4808.160 kb on + strand, within ABID97_RS23250 at 4808.160 kb on + strand, within ABID97_RS23250 at 4808.161 kb on - strand, within ABID97_RS23250 at 4808.161 kb on - strand, within ABID97_RS23250 at 4808.472 kb on + strand, within ABID97_RS23250 at 4808.472 kb on + strand, within ABID97_RS23250 at 4808.472 kb on + strand, within ABID97_RS23250 at 4808.473 kb on - strand, within ABID97_RS23250 at 4808.473 kb on - strand, within ABID97_RS23250 at 4808.594 kb on - strand, within ABID97_RS23250 at 4808.594 kb on - strand, within ABID97_RS23250 at 4808.751 kb on + strand, within ABID97_RS23250 at 4808.751 kb on + strand, within ABID97_RS23250 at 4808.874 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,806,955 + ABID97_RS23245 0.40 -0.4 4,806,955 + ABID97_RS23245 0.40 +0.3 4,806,955 + ABID97_RS23245 0.40 +0.6 4,806,955 + ABID97_RS23245 0.40 -2.8 4,806,955 + ABID97_RS23245 0.40 -1.0 4,806,956 - ABID97_RS23245 0.40 +2.0 4,806,956 - ABID97_RS23245 0.40 -1.0 4,807,000 + ABID97_RS23245 0.44 +1.0 4,807,001 - ABID97_RS23245 0.44 -1.2 4,807,255 + ABID97_RS23245 0.64 +0.3 4,807,255 + ABID97_RS23245 0.64 +0.6 4,807,255 + ABID97_RS23245 0.64 +0.2 4,807,255 + ABID97_RS23245 0.64 +0.1 4,807,255 - ABID97_RS23245 0.64 +1.4 4,807,256 - ABID97_RS23245 0.64 -0.6 4,807,256 - ABID97_RS23245 0.64 -0.0 4,807,256 - ABID97_RS23245 0.64 +0.4 4,807,256 - ABID97_RS23245 0.64 +0.7 4,807,435 - ABID97_RS23245 0.78 -0.8 4,807,834 - +0.5 4,807,834 - -0.8 4,807,873 - ABID97_RS23250 0.10 +0.4 4,807,905 + ABID97_RS23250 0.13 +0.4 4,808,125 - ABID97_RS23250 0.32 -0.4 4,808,125 - ABID97_RS23250 0.32 +0.2 4,808,125 - ABID97_RS23250 0.32 +0.0 4,808,160 + ABID97_RS23250 0.35 -0.2 4,808,160 + ABID97_RS23250 0.35 -0.9 4,808,161 - ABID97_RS23250 0.35 +0.0 4,808,161 - ABID97_RS23250 0.35 -0.1 4,808,472 + ABID97_RS23250 0.63 +0.2 4,808,472 + ABID97_RS23250 0.63 -0.5 4,808,472 + ABID97_RS23250 0.63 +0.2 4,808,473 - ABID97_RS23250 0.63 +0.2 4,808,473 - ABID97_RS23250 0.63 -1.4 4,808,594 - ABID97_RS23250 0.74 -0.4 4,808,594 - ABID97_RS23250 0.74 -0.5 4,808,751 + ABID97_RS23250 0.88 +0.2 4,808,751 + ABID97_RS23250 0.88 -0.1 4,808,874 + -0.1
Or see this region's nucleotide sequence