Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22660 and ABID97_RS22665 are separated by 102 nucleotides ABID97_RS22665 and ABID97_RS22670 are separated by 32 nucleotides ABID97_RS22670 and ABID97_RS22675 are separated by 26 nucleotides
ABID97_RS22660: ABID97_RS22660 - quinone oxidoreductase, at 4,694,043 to 4,695,026
_RS22660
ABID97_RS22665: ABID97_RS22665 - DMT family transporter, at 4,695,129 to 4,696,037
_RS22665
ABID97_RS22670: ABID97_RS22670 - SDR family oxidoreductase, at 4,696,070 to 4,696,864
_RS22670
ABID97_RS22675: ABID97_RS22675 - DMT family transporter, at 4,696,891 to 4,697,841
_RS22675
Position (kb) 4695
4696
4697 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4694.242 kb on + strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.380 kb on + strand, within ABID97_RS22660 at 4694.380 kb on + strand, within ABID97_RS22660 at 4694.381 kb on - strand, within ABID97_RS22660 at 4694.447 kb on - strand, within ABID97_RS22660 at 4694.447 kb on - strand, within ABID97_RS22660 at 4694.447 kb on - strand, within ABID97_RS22660 at 4694.642 kb on - strand, within ABID97_RS22660 at 4694.642 kb on - strand, within ABID97_RS22660 at 4694.770 kb on + strand, within ABID97_RS22660 at 4694.770 kb on + strand, within ABID97_RS22660 at 4694.771 kb on - strand, within ABID97_RS22660 at 4694.771 kb on - strand, within ABID97_RS22660 at 4694.890 kb on + strand, within ABID97_RS22660 at 4694.890 kb on + strand, within ABID97_RS22660 at 4694.891 kb on - strand, within ABID97_RS22660 at 4695.116 kb on - strand at 4695.384 kb on + strand, within ABID97_RS22665 at 4695.384 kb on + strand, within ABID97_RS22665 at 4695.385 kb on - strand, within ABID97_RS22665 at 4695.385 kb on - strand, within ABID97_RS22665 at 4695.399 kb on + strand, within ABID97_RS22665 at 4695.615 kb on + strand, within ABID97_RS22665 at 4695.615 kb on + strand, within ABID97_RS22665 at 4695.615 kb on + strand, within ABID97_RS22665 at 4695.616 kb on - strand, within ABID97_RS22665 at 4695.616 kb on - strand, within ABID97_RS22665 at 4695.616 kb on - strand, within ABID97_RS22665 at 4695.648 kb on + strand, within ABID97_RS22665 at 4695.649 kb on - strand, within ABID97_RS22665 at 4695.649 kb on - strand, within ABID97_RS22665 at 4695.649 kb on - strand, within ABID97_RS22665 at 4695.649 kb on - strand, within ABID97_RS22665 at 4695.786 kb on + strand, within ABID97_RS22665 at 4695.786 kb on + strand, within ABID97_RS22665 at 4695.787 kb on - strand, within ABID97_RS22665 at 4695.787 kb on - strand, within ABID97_RS22665 at 4695.787 kb on - strand, within ABID97_RS22665 at 4695.856 kb on - strand, within ABID97_RS22665 at 4695.978 kb on + strand at 4695.979 kb on - strand at 4695.979 kb on - strand at 4696.074 kb on + strand at 4696.074 kb on + strand at 4696.125 kb on + strand at 4696.126 kb on - strand at 4696.126 kb on - strand at 4696.126 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,694,242 + ABID97_RS22660 0.20 -2.2 4,694,243 - ABID97_RS22660 0.20 +1.6 4,694,243 - ABID97_RS22660 0.20 -0.1 4,694,243 - ABID97_RS22660 0.20 -0.6 4,694,243 - ABID97_RS22660 0.20 -0.3 4,694,243 - ABID97_RS22660 0.20 +0.2 4,694,380 + ABID97_RS22660 0.34 +0.1 4,694,380 + ABID97_RS22660 0.34 +1.9 4,694,381 - ABID97_RS22660 0.34 -0.2 4,694,447 - ABID97_RS22660 0.41 -1.6 4,694,447 - ABID97_RS22660 0.41 +0.9 4,694,447 - ABID97_RS22660 0.41 +0.2 4,694,642 - ABID97_RS22660 0.61 -0.4 4,694,642 - ABID97_RS22660 0.61 +0.1 4,694,770 + ABID97_RS22660 0.74 +0.3 4,694,770 + ABID97_RS22660 0.74 -0.0 4,694,771 - ABID97_RS22660 0.74 +0.1 4,694,771 - ABID97_RS22660 0.74 -0.2 4,694,890 + ABID97_RS22660 0.86 -0.3 4,694,890 + ABID97_RS22660 0.86 +0.3 4,694,891 - ABID97_RS22660 0.86 -0.5 4,695,116 - -1.0 4,695,384 + ABID97_RS22665 0.28 -0.2 4,695,384 + ABID97_RS22665 0.28 +0.6 4,695,385 - ABID97_RS22665 0.28 -0.9 4,695,385 - ABID97_RS22665 0.28 -0.3 4,695,399 + ABID97_RS22665 0.30 +0.3 4,695,615 + ABID97_RS22665 0.53 +0.7 4,695,615 + ABID97_RS22665 0.53 -0.7 4,695,615 + ABID97_RS22665 0.53 -0.4 4,695,616 - ABID97_RS22665 0.54 -0.7 4,695,616 - ABID97_RS22665 0.54 +0.9 4,695,616 - ABID97_RS22665 0.54 +0.5 4,695,648 + ABID97_RS22665 0.57 -0.1 4,695,649 - ABID97_RS22665 0.57 +0.8 4,695,649 - ABID97_RS22665 0.57 +0.9 4,695,649 - ABID97_RS22665 0.57 +1.1 4,695,649 - ABID97_RS22665 0.57 -0.6 4,695,786 + ABID97_RS22665 0.72 -1.1 4,695,786 + ABID97_RS22665 0.72 -1.4 4,695,787 - ABID97_RS22665 0.72 +0.1 4,695,787 - ABID97_RS22665 0.72 +0.3 4,695,787 - ABID97_RS22665 0.72 -0.1 4,695,856 - ABID97_RS22665 0.80 -0.0 4,695,978 + +0.4 4,695,979 - -0.1 4,695,979 - -0.8 4,696,074 + -0.8 4,696,074 + -0.0 4,696,125 + +0.5 4,696,126 - +0.4 4,696,126 - +1.6 4,696,126 - +0.2
Or see this region's nucleotide sequence