Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS19210 and ABID97_RS19215 are separated by 74 nucleotides ABID97_RS19215 and ABID97_RS19220 overlap by 8 nucleotides
ABID97_RS19210: ABID97_RS19210 - hypothetical protein, at 3,962,684 to 3,963,622
_RS19210
ABID97_RS19215: ABID97_RS19215 - error-prone DNA polymerase, at 3,963,697 to 3,967,053
_RS19215
ABID97_RS19220: ABID97_RS19220 - DNA polymerase Y family protein, at 3,967,046 to 3,968,395
_RS19220
Position (kb)
3963
3964
3965
3966
3967
3968 Strain fitness (log2 ratio)
-2
-1
0
1 at 3964.592 kb on + strand, within ABID97_RS19215 at 3964.592 kb on + strand, within ABID97_RS19215 at 3965.571 kb on - strand, within ABID97_RS19215 at 3965.705 kb on + strand, within ABID97_RS19215 at 3965.705 kb on + strand, within ABID97_RS19215 at 3965.706 kb on - strand, within ABID97_RS19215 at 3965.711 kb on + strand, within ABID97_RS19215 at 3965.711 kb on + strand, within ABID97_RS19215 at 3965.711 kb on + strand, within ABID97_RS19215 at 3965.712 kb on - strand, within ABID97_RS19215 at 3965.712 kb on - strand, within ABID97_RS19215 at 3965.712 kb on - strand, within ABID97_RS19215 at 3965.948 kb on + strand, within ABID97_RS19215 at 3965.949 kb on - strand, within ABID97_RS19215 at 3966.107 kb on + strand, within ABID97_RS19215 at 3966.107 kb on + strand, within ABID97_RS19215 at 3966.107 kb on + strand, within ABID97_RS19215 at 3966.107 kb on + strand, within ABID97_RS19215 at 3966.186 kb on - strand, within ABID97_RS19215 at 3967.053 kb on + strand at 3967.155 kb on + strand at 3967.155 kb on + strand at 3967.155 kb on + strand at 3967.155 kb on + strand at 3967.156 kb on - strand at 3967.156 kb on - strand at 3967.314 kb on + strand, within ABID97_RS19220 at 3967.315 kb on - strand, within ABID97_RS19220
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 3,964,592 + ABID97_RS19215 0.27 -0.4 3,964,592 + ABID97_RS19215 0.27 -0.4 3,965,571 - ABID97_RS19215 0.56 -0.4 3,965,705 + ABID97_RS19215 0.60 +1.6 3,965,705 + ABID97_RS19215 0.60 -0.5 3,965,706 - ABID97_RS19215 0.60 -0.1 3,965,711 + ABID97_RS19215 0.60 -0.2 3,965,711 + ABID97_RS19215 0.60 -0.2 3,965,711 + ABID97_RS19215 0.60 -0.4 3,965,712 - ABID97_RS19215 0.60 -0.2 3,965,712 - ABID97_RS19215 0.60 -0.4 3,965,712 - ABID97_RS19215 0.60 -1.0 3,965,948 + ABID97_RS19215 0.67 -1.1 3,965,949 - ABID97_RS19215 0.67 -1.8 3,966,107 + ABID97_RS19215 0.72 -0.5 3,966,107 + ABID97_RS19215 0.72 -0.1 3,966,107 + ABID97_RS19215 0.72 -0.5 3,966,107 + ABID97_RS19215 0.72 -0.0 3,966,186 - ABID97_RS19215 0.74 -1.2 3,967,053 + +0.5 3,967,155 + -0.9 3,967,155 + +0.2 3,967,155 + -0.2 3,967,155 + -0.6 3,967,156 - -1.7 3,967,156 - +0.6 3,967,314 + ABID97_RS19220 0.20 -1.5 3,967,315 - ABID97_RS19220 0.20 -0.9
Or see this region's nucleotide sequence