Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06895 and ABID97_RS06900 are separated by 13 nucleotides ABID97_RS06900 and ABID97_RS06905 are separated by 139 nucleotides
ABID97_RS06895: ABID97_RS06895 - cyanophycin synthetase, at 1,455,117 to 1,457,684
_RS06895
ABID97_RS06900: ABID97_RS06900 - cyanophycin synthetase, at 1,457,698 to 1,459,941
_RS06900
ABID97_RS06905: ABID97_RS06905 - ABC transporter ATP-binding protein, at 1,460,081 to 1,462,357
_RS06905
Position (kb)
1457
1458
1459
1460 Strain fitness (log2 ratio)
-2
-1
0
1 at 1457.375 kb on - strand, within ABID97_RS06895 at 1457.393 kb on - strand, within ABID97_RS06895 at 1457.393 kb on - strand, within ABID97_RS06895 at 1458.030 kb on - strand, within ABID97_RS06900 at 1458.173 kb on + strand, within ABID97_RS06900 at 1459.307 kb on + strand, within ABID97_RS06900 at 1459.308 kb on - strand, within ABID97_RS06900 at 1459.349 kb on + strand, within ABID97_RS06900 at 1459.446 kb on - strand, within ABID97_RS06900 at 1459.601 kb on + strand, within ABID97_RS06900 at 1459.901 kb on + strand at 1459.902 kb on - strand at 1459.902 kb on - strand at 1460.387 kb on + strand, within ABID97_RS06905 at 1460.530 kb on + strand, within ABID97_RS06905 at 1460.530 kb on + strand, within ABID97_RS06905 at 1460.530 kb on + strand, within ABID97_RS06905 at 1460.531 kb on - strand, within ABID97_RS06905 at 1460.639 kb on + strand, within ABID97_RS06905 at 1460.721 kb on - strand, within ABID97_RS06905 at 1460.780 kb on + strand, within ABID97_RS06905 at 1460.781 kb on - strand, within ABID97_RS06905 at 1460.834 kb on + strand, within ABID97_RS06905 at 1460.834 kb on + strand, within ABID97_RS06905 at 1460.834 kb on + strand, within ABID97_RS06905 at 1460.835 kb on - strand, within ABID97_RS06905 at 1460.835 kb on - strand, within ABID97_RS06905 at 1460.835 kb on - strand, within ABID97_RS06905 at 1460.864 kb on + strand, within ABID97_RS06905
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 1,457,375 - ABID97_RS06895 0.88 +0.4 1,457,393 - ABID97_RS06895 0.89 +0.9 1,457,393 - ABID97_RS06895 0.89 -1.6 1,458,030 - ABID97_RS06900 0.15 +0.6 1,458,173 + ABID97_RS06900 0.21 -0.4 1,459,307 + ABID97_RS06900 0.72 +0.6 1,459,308 - ABID97_RS06900 0.72 +1.0 1,459,349 + ABID97_RS06900 0.74 -0.0 1,459,446 - ABID97_RS06900 0.78 +1.0 1,459,601 + ABID97_RS06900 0.85 +0.5 1,459,901 + +0.2 1,459,902 - +0.1 1,459,902 - -0.1 1,460,387 + ABID97_RS06905 0.13 -1.0 1,460,530 + ABID97_RS06905 0.20 +0.0 1,460,530 + ABID97_RS06905 0.20 +0.6 1,460,530 + ABID97_RS06905 0.20 -1.1 1,460,531 - ABID97_RS06905 0.20 -0.3 1,460,639 + ABID97_RS06905 0.25 +1.1 1,460,721 - ABID97_RS06905 0.28 +0.1 1,460,780 + ABID97_RS06905 0.31 +0.2 1,460,781 - ABID97_RS06905 0.31 -1.9 1,460,834 + ABID97_RS06905 0.33 -1.3 1,460,834 + ABID97_RS06905 0.33 +0.1 1,460,834 + ABID97_RS06905 0.33 -0.7 1,460,835 - ABID97_RS06905 0.33 -1.3 1,460,835 - ABID97_RS06905 0.33 +0.2 1,460,835 - ABID97_RS06905 0.33 -0.2 1,460,864 + ABID97_RS06905 0.34 -0.4
Or see this region's nucleotide sequence