Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06030 and ABID97_RS06035 are separated by 11 nucleotides ABID97_RS06035 and ABID97_RS06040 are separated by 100 nucleotides
ABID97_RS06030: ABID97_RS06030 - putative DNA modification/repair radical SAM protein, at 1,275,230 to 1,276,483
_RS06030
ABID97_RS06035: ABID97_RS06035 - UdgX family uracil-DNA binding protein, at 1,276,495 to 1,277,961
_RS06035
ABID97_RS06040: ABID97_RS06040 - dihydroorotase, at 1,278,062 to 1,279,093
_RS06040
Position (kb) 1276
1277
1278 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1275.647 kb on + strand, within ABID97_RS06030 at 1275.647 kb on + strand, within ABID97_RS06030 at 1275.999 kb on - strand, within ABID97_RS06030 at 1276.008 kb on - strand, within ABID97_RS06030 at 1276.026 kb on - strand, within ABID97_RS06030 at 1276.026 kb on - strand, within ABID97_RS06030 at 1276.028 kb on + strand, within ABID97_RS06030 at 1276.028 kb on + strand, within ABID97_RS06030 at 1276.029 kb on - strand, within ABID97_RS06030 at 1276.029 kb on - strand, within ABID97_RS06030 at 1276.137 kb on - strand, within ABID97_RS06030 at 1276.137 kb on - strand, within ABID97_RS06030 at 1276.137 kb on - strand, within ABID97_RS06030 at 1276.137 kb on - strand, within ABID97_RS06030 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.138 kb on - strand, within ABID97_RS06035 at 1277.138 kb on - strand, within ABID97_RS06035 at 1277.140 kb on + strand, within ABID97_RS06035 at 1277.141 kb on - strand, within ABID97_RS06035 at 1277.141 kb on - strand, within ABID97_RS06035 at 1277.590 kb on + strand, within ABID97_RS06035 at 1277.591 kb on - strand, within ABID97_RS06035 at 1277.621 kb on - strand, within ABID97_RS06035 at 1278.858 kb on - strand, within ABID97_RS06040 at 1278.884 kb on + strand, within ABID97_RS06040
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 1,275,647 + ABID97_RS06030 0.33 +0.6 1,275,647 + ABID97_RS06030 0.33 +0.5 1,275,999 - ABID97_RS06030 0.61 +1.7 1,276,008 - ABID97_RS06030 0.62 -1.4 1,276,026 - ABID97_RS06030 0.63 -0.7 1,276,026 - ABID97_RS06030 0.63 +0.3 1,276,028 + ABID97_RS06030 0.64 +0.2 1,276,028 + ABID97_RS06030 0.64 +0.2 1,276,029 - ABID97_RS06030 0.64 -0.1 1,276,029 - ABID97_RS06030 0.64 +0.1 1,276,137 - ABID97_RS06030 0.72 -0.2 1,276,137 - ABID97_RS06030 0.72 -0.3 1,276,137 - ABID97_RS06030 0.72 -0.1 1,276,137 - ABID97_RS06030 0.72 -0.3 1,277,137 + ABID97_RS06035 0.44 -0.6 1,277,137 + ABID97_RS06035 0.44 -0.7 1,277,137 + ABID97_RS06035 0.44 +0.3 1,277,137 + ABID97_RS06035 0.44 -0.4 1,277,138 - ABID97_RS06035 0.44 -0.1 1,277,138 - ABID97_RS06035 0.44 -3.0 1,277,140 + ABID97_RS06035 0.44 -1.2 1,277,141 - ABID97_RS06035 0.44 +0.0 1,277,141 - ABID97_RS06035 0.44 +0.1 1,277,590 + ABID97_RS06035 0.75 +0.1 1,277,591 - ABID97_RS06035 0.75 -0.1 1,277,621 - ABID97_RS06035 0.77 +0.1 1,278,858 - ABID97_RS06040 0.77 +0.9 1,278,884 + ABID97_RS06040 0.80 +0.4
Or see this region's nucleotide sequence