Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03020 and ABID97_RS03025 are separated by 29 nucleotides ABID97_RS03025 and ABID97_RS03030 are separated by 1 nucleotides ABID97_RS03030 and ABID97_RS03035 are separated by 10 nucleotides
ABID97_RS03020: ABID97_RS03020 - hypothetical protein, at 611,554 to 612,885
_RS03020
ABID97_RS03025: ABID97_RS03025 - feruloyl-CoA synthase, at 612,915 to 614,720
_RS03025
ABID97_RS03030: ABID97_RS03030 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein, at 614,722 to 615,663
_RS03030
ABID97_RS03035: ABID97_RS03035 - Bug family tripartite tricarboxylate transporter substrate binding protein, at 615,674 to 616,666
_RS03035
Position (kb) 612
613
614
615 Strain fitness (log2 ratio) -2
-1
0
1 at 612.053 kb on - strand, within ABID97_RS03020 at 612.559 kb on + strand, within ABID97_RS03020 at 612.559 kb on + strand, within ABID97_RS03020 at 612.560 kb on - strand, within ABID97_RS03020 at 612.560 kb on - strand, within ABID97_RS03020 at 613.015 kb on + strand at 613.015 kb on + strand at 613.015 kb on + strand at 613.016 kb on - strand at 613.016 kb on - strand at 613.016 kb on - strand at 613.016 kb on - strand at 613.271 kb on + strand, within ABID97_RS03025 at 613.271 kb on + strand, within ABID97_RS03025 at 613.393 kb on + strand, within ABID97_RS03025 at 613.394 kb on - strand, within ABID97_RS03025 at 613.696 kb on + strand, within ABID97_RS03025 at 613.873 kb on + strand, within ABID97_RS03025 at 613.873 kb on + strand, within ABID97_RS03025 at 613.874 kb on - strand, within ABID97_RS03025 at 614.078 kb on - strand, within ABID97_RS03025 at 614.078 kb on - strand, within ABID97_RS03025 at 614.078 kb on - strand, within ABID97_RS03025 at 614.243 kb on - strand, within ABID97_RS03025 at 614.263 kb on + strand, within ABID97_RS03025 at 614.263 kb on + strand, within ABID97_RS03025 at 614.263 kb on + strand, within ABID97_RS03025 at 614.264 kb on - strand, within ABID97_RS03025 at 614.264 kb on - strand, within ABID97_RS03025 at 614.333 kb on - strand, within ABID97_RS03025 at 614.608 kb on + strand at 614.764 kb on + strand at 614.764 kb on + strand at 615.155 kb on + strand, within ABID97_RS03030 at 615.155 kb on + strand, within ABID97_RS03030 at 615.155 kb on + strand, within ABID97_RS03030 at 615.156 kb on - strand, within ABID97_RS03030 at 615.156 kb on - strand, within ABID97_RS03030 at 615.156 kb on - strand, within ABID97_RS03030
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 612,053 - ABID97_RS03020 0.37 -0.1 612,559 + ABID97_RS03020 0.75 +0.0 612,559 + ABID97_RS03020 0.75 -0.4 612,560 - ABID97_RS03020 0.76 +0.5 612,560 - ABID97_RS03020 0.76 +1.1 613,015 + -1.0 613,015 + -0.3 613,015 + +0.1 613,016 - -0.5 613,016 - -0.3 613,016 - -1.1 613,016 - -0.3 613,271 + ABID97_RS03025 0.20 -0.8 613,271 + ABID97_RS03025 0.20 -0.8 613,393 + ABID97_RS03025 0.26 +0.4 613,394 - ABID97_RS03025 0.27 +0.3 613,696 + ABID97_RS03025 0.43 +1.7 613,873 + ABID97_RS03025 0.53 -0.2 613,873 + ABID97_RS03025 0.53 -0.5 613,874 - ABID97_RS03025 0.53 -0.6 614,078 - ABID97_RS03025 0.64 +0.1 614,078 - ABID97_RS03025 0.64 -2.4 614,078 - ABID97_RS03025 0.64 +0.8 614,243 - ABID97_RS03025 0.74 -0.7 614,263 + ABID97_RS03025 0.75 -1.6 614,263 + ABID97_RS03025 0.75 -0.6 614,263 + ABID97_RS03025 0.75 -1.1 614,264 - ABID97_RS03025 0.75 +0.1 614,264 - ABID97_RS03025 0.75 -0.8 614,333 - ABID97_RS03025 0.79 -0.6 614,608 + +0.5 614,764 + +0.4 614,764 + -1.3 615,155 + ABID97_RS03030 0.46 -0.2 615,155 + ABID97_RS03030 0.46 +0.4 615,155 + ABID97_RS03030 0.46 -0.1 615,156 - ABID97_RS03030 0.46 -0.6 615,156 - ABID97_RS03030 0.46 +0.7 615,156 - ABID97_RS03030 0.46 +0.2
Or see this region's nucleotide sequence