Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02825 and ABID97_RS02830 overlap by 28 nucleotides ABID97_RS02830 and ABID97_RS02835 are separated by 47 nucleotides
ABID97_RS02825: ABID97_RS02825 - heavy metal translocating P-type ATPase, at 577,395 to 579,683
_RS02825
ABID97_RS02830: ABID97_RS02830 - GNAT family N-acetyltransferase, at 579,656 to 580,156
_RS02830
ABID97_RS02835: ABID97_RS02835 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 580,204 to 581,490
_RS02835
Position (kb) 579
580
581 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 579.516 kb on + strand at 579.516 kb on + strand at 579.517 kb on - strand at 579.517 kb on - strand at 579.517 kb on - strand at 579.762 kb on + strand, within ABID97_RS02830 at 579.763 kb on - strand, within ABID97_RS02830 at 579.763 kb on - strand, within ABID97_RS02830 at 579.798 kb on + strand, within ABID97_RS02830 at 579.798 kb on + strand, within ABID97_RS02830 at 579.798 kb on + strand, within ABID97_RS02830 at 579.799 kb on - strand, within ABID97_RS02830 at 579.799 kb on - strand, within ABID97_RS02830 at 579.799 kb on - strand, within ABID97_RS02830 at 579.984 kb on + strand, within ABID97_RS02830 at 579.985 kb on - strand, within ABID97_RS02830 at 579.990 kb on + strand, within ABID97_RS02830 at 579.990 kb on + strand, within ABID97_RS02830 at 579.990 kb on + strand, within ABID97_RS02830 at 579.990 kb on + strand, within ABID97_RS02830 at 579.991 kb on - strand, within ABID97_RS02830 at 579.991 kb on - strand, within ABID97_RS02830 at 580.020 kb on + strand, within ABID97_RS02830 at 580.020 kb on + strand, within ABID97_RS02830 at 580.020 kb on + strand, within ABID97_RS02830 at 580.020 kb on + strand, within ABID97_RS02830 at 580.021 kb on - strand, within ABID97_RS02830 at 580.021 kb on - strand, within ABID97_RS02830 at 580.021 kb on - strand, within ABID97_RS02830 at 580.021 kb on - strand, within ABID97_RS02830 at 580.057 kb on - strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.089 kb on + strand, within ABID97_RS02830 at 580.090 kb on - strand, within ABID97_RS02830 at 580.090 kb on - strand, within ABID97_RS02830 at 580.090 kb on - strand, within ABID97_RS02830 at 580.090 kb on - strand, within ABID97_RS02830 at 580.090 kb on - strand, within ABID97_RS02830 at 580.150 kb on + strand at 580.150 kb on + strand at 580.150 kb on + strand at 580.150 kb on + strand at 580.151 kb on - strand at 580.151 kb on - strand at 580.151 kb on - strand at 580.200 kb on + strand at 580.201 kb on - strand at 580.201 kb on - strand at 580.277 kb on + strand at 580.277 kb on + strand at 580.278 kb on - strand at 580.970 kb on + strand, within ABID97_RS02835 at 580.971 kb on - strand, within ABID97_RS02835 at 580.971 kb on - strand, within ABID97_RS02835
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 579,516 + -2.0 579,516 + -2.1 579,517 - -1.3 579,517 - -2.3 579,517 - -1.2 579,762 + ABID97_RS02830 0.21 -0.1 579,763 - ABID97_RS02830 0.21 +1.4 579,763 - ABID97_RS02830 0.21 +0.1 579,798 + ABID97_RS02830 0.28 +0.6 579,798 + ABID97_RS02830 0.28 -0.9 579,798 + ABID97_RS02830 0.28 -0.3 579,799 - ABID97_RS02830 0.29 +0.3 579,799 - ABID97_RS02830 0.29 +2.1 579,799 - ABID97_RS02830 0.29 -0.7 579,984 + ABID97_RS02830 0.65 +0.5 579,985 - ABID97_RS02830 0.66 +0.1 579,990 + ABID97_RS02830 0.67 -0.8 579,990 + ABID97_RS02830 0.67 -0.0 579,990 + ABID97_RS02830 0.67 +0.3 579,990 + ABID97_RS02830 0.67 -0.1 579,991 - ABID97_RS02830 0.67 -1.0 579,991 - ABID97_RS02830 0.67 +0.2 580,020 + ABID97_RS02830 0.73 -0.6 580,020 + ABID97_RS02830 0.73 -0.1 580,020 + ABID97_RS02830 0.73 -0.6 580,020 + ABID97_RS02830 0.73 +0.2 580,021 - ABID97_RS02830 0.73 -0.6 580,021 - ABID97_RS02830 0.73 +0.0 580,021 - ABID97_RS02830 0.73 +0.3 580,021 - ABID97_RS02830 0.73 -0.0 580,057 - ABID97_RS02830 0.80 -3.4 580,089 + ABID97_RS02830 0.86 -0.4 580,089 + ABID97_RS02830 0.86 -0.6 580,089 + ABID97_RS02830 0.86 +0.6 580,089 + ABID97_RS02830 0.86 -0.3 580,089 + ABID97_RS02830 0.86 +0.1 580,089 + ABID97_RS02830 0.86 +0.9 580,089 + ABID97_RS02830 0.86 -0.3 580,089 + ABID97_RS02830 0.86 -0.2 580,089 + ABID97_RS02830 0.86 +0.4 580,089 + ABID97_RS02830 0.86 -1.0 580,089 + ABID97_RS02830 0.86 -0.3 580,090 - ABID97_RS02830 0.87 -0.5 580,090 - ABID97_RS02830 0.87 +0.3 580,090 - ABID97_RS02830 0.87 -1.4 580,090 - ABID97_RS02830 0.87 -0.1 580,090 - ABID97_RS02830 0.87 -0.7 580,150 + -0.5 580,150 + -1.7 580,150 + -0.2 580,150 + +0.1 580,151 - +1.4 580,151 - -0.3 580,151 - +0.8 580,200 + -0.7 580,201 - -0.0 580,201 - +0.1 580,277 + +0.8 580,277 + -0.7 580,278 - -0.2 580,970 + ABID97_RS02835 0.60 -2.5 580,971 - ABID97_RS02835 0.60 +0.3 580,971 - ABID97_RS02835 0.60 -0.9
Or see this region's nucleotide sequence