Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02680 and ABID97_RS02685 are separated by 88 nucleotides ABID97_RS02685 and ABID97_RS02690 are separated by 134 nucleotides
ABID97_RS02680: ABID97_RS02680 - chromosomal replication initiator protein DnaA, at 545,439 to 546,818
_RS02680
ABID97_RS02685: ABID97_RS02685 - DNA polymerase III subunit beta, at 546,907 to 548,013
_RS02685
ABID97_RS02690: ABID97_RS02690 - DNA topoisomerase (ATP-hydrolyzing) subunit B, at 548,148 to 550,772
_RS02690
Position (kb) 546
547
548
549 Strain fitness (log2 ratio) -1
0
1 at 546.867 kb on + strand at 546.867 kb on + strand at 546.867 kb on + strand at 546.867 kb on + strand at 546.868 kb on - strand at 546.868 kb on - strand at 546.868 kb on - strand at 546.868 kb on - strand at 546.887 kb on + strand at 546.887 kb on + strand at 546.887 kb on + strand at 546.887 kb on + strand at 546.887 kb on + strand at 546.888 kb on - strand at 546.888 kb on - strand at 548.011 kb on + strand at 548.011 kb on + strand at 548.011 kb on + strand at 548.012 kb on - strand at 548.012 kb on - strand at 548.012 kb on - strand at 548.012 kb on - strand at 548.133 kb on + strand at 548.133 kb on + strand at 548.134 kb on - strand at 548.141 kb on + strand at 548.142 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 546,867 + +0.2 546,867 + +1.1 546,867 + +0.2 546,867 + +0.5 546,868 - +0.1 546,868 - -0.6 546,868 - -0.3 546,868 - +0.3 546,887 + -0.0 546,887 + -0.4 546,887 + -0.3 546,887 + +0.0 546,887 + -0.5 546,888 - +0.1 546,888 - -0.8 548,011 + +0.2 548,011 + -0.2 548,011 + -0.5 548,012 - +0.6 548,012 - -0.6 548,012 - +0.5 548,012 - +0.9 548,133 + +0.7 548,133 + +0.4 548,134 - +0.3 548,141 + -0.0 548,142 - +1.1
Or see this region's nucleotide sequence