Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29845

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
6,632,221	+		PFLU_RS29840	0.25	-0.4
6,632,222	-		PFLU_RS29840	0.25	-0.4
6,632,328	+		PFLU_RS29840	0.35	+0.5
6,632,328	+		PFLU_RS29840	0.35	-0.1
6,632,328	+		PFLU_RS29840	0.35	+0.1
6,632,328	+		PFLU_RS29840	0.35	-0.3
6,632,328	+		PFLU_RS29840	0.35	-0.4
6,632,328	+		PFLU_RS29840	0.35	+1.2
6,632,328	+		PFLU_RS29840	0.35	+0.1
6,632,329	-		PFLU_RS29840	0.35	+1.1
6,632,329	-		PFLU_RS29840	0.35	+0.2
6,632,329	-		PFLU_RS29840	0.35	-0.7
6,632,329	-		PFLU_RS29840	0.35	+0.4
6,632,329	-		PFLU_RS29840	0.35	+0.7
6,632,329	-		PFLU_RS29840	0.35	+0.6
6,632,334	+		PFLU_RS29840	0.35	-0.5
6,632,334	+		PFLU_RS29840	0.35	-0.1
6,632,334	+		PFLU_RS29840	0.35	+0.5
6,632,334	+		PFLU_RS29840	0.35	+0.3
6,632,334	+		PFLU_RS29840	0.35	+0.8
6,632,334	+		PFLU_RS29840	0.35	+0.6
6,632,334	+		PFLU_RS29840	0.35	+1.1
6,632,334	+		PFLU_RS29840	0.35	+0.3
6,632,334	+		PFLU_RS29840	0.35	+0.1
6,632,334	+		PFLU_RS29840	0.35	+0.2
6,632,335	-		PFLU_RS29840	0.35	+0.2
6,632,335	-		PFLU_RS29840	0.35	+1.2
6,632,335	-		PFLU_RS29840	0.35	+0.3
6,632,335	-		PFLU_RS29840	0.35	-1.5
6,632,335	-		PFLU_RS29840	0.35	+1.6
6,632,335	-		PFLU_RS29840	0.35	+0.3
6,632,335	-		PFLU_RS29840	0.35	-1.0
6,632,335	-		PFLU_RS29840	0.35	+1.0
6,632,335	-		PFLU_RS29840	0.35	+1.3
6,632,335	-		PFLU_RS29840	0.35	+0.1
6,632,335	-		PFLU_RS29840	0.35	+0.3
6,632,335	-		PFLU_RS29840	0.35	-0.3
6,632,335	-		PFLU_RS29840	0.35	-0.9
6,632,335	-		PFLU_RS29840	0.35	+0.5
6,632,335	-		PFLU_RS29840	0.35	+0.5
6,632,595	+		PFLU_RS29840	0.59	+0.6
6,632,596	-		PFLU_RS29840	0.59	-0.6
6,632,596	-		PFLU_RS29840	0.59	-0.5
6,632,596	-		PFLU_RS29840	0.59	+0.6
6,632,596	-		PFLU_RS29840	0.59	+4.8
6,632,596	-		PFLU_RS29840	0.59	-1.8
6,632,596	-		PFLU_RS29840	0.59	+0.1
6,632,596	-		PFLU_RS29840	0.59	+0.7
6,632,613	+		PFLU_RS29840	0.61	-0.4
6,632,613	+		PFLU_RS29840	0.61	+0.4
6,632,613	+		PFLU_RS29840	0.61	+0.7
6,632,613	+		PFLU_RS29840	0.61	-0.0
6,632,613	+		PFLU_RS29840	0.61	-0.6
6,632,613	+		PFLU_RS29840	0.61	+0.6
6,632,613	+		PFLU_RS29840	0.61	+0.2
6,632,613	+		PFLU_RS29840	0.61	+0.1
6,632,613	+		PFLU_RS29840	0.61	+1.1
6,632,614	-		PFLU_RS29840	0.61	-0.5
6,632,614	-		PFLU_RS29840	0.61	+0.8
6,632,614	-		PFLU_RS29840	0.61	-0.0
6,632,614	-		PFLU_RS29840	0.61	-0.3
6,632,614	-		PFLU_RS29840	0.61	-1.5
6,632,614	-		PFLU_RS29840	0.61	-0.2
6,632,614	-		PFLU_RS29840	0.61	-0.1
6,632,614	-		PFLU_RS29840	0.61	+0.1
6,632,614	-		PFLU_RS29840	0.61	-0.1
6,632,614	-		PFLU_RS29840	0.61	-0.7
6,632,614	-		PFLU_RS29840	0.61	+0.5
6,632,805	+		PFLU_RS29840	0.78	-1.0
6,632,805	+		PFLU_RS29840	0.78	-0.7
6,632,805	+		PFLU_RS29840	0.78	+4.0
6,632,820	+		PFLU_RS29840	0.80	-1.3
6,632,820	+		PFLU_RS29840	0.80	-0.1
6,632,820	+		PFLU_RS29840	0.80	-0.6
6,632,820	+		PFLU_RS29840	0.80	+0.1
6,632,820	+		PFLU_RS29840	0.80	-0.9
6,632,820	+		PFLU_RS29840	0.80	-0.6
6,632,820	+		PFLU_RS29840	0.80	-1.5
6,632,820	+		PFLU_RS29840	0.80	+0.7
6,632,820	+		PFLU_RS29840	0.80	+0.9
6,632,820	+		PFLU_RS29840	0.80	-1.2
6,632,820	+		PFLU_RS29840	0.80	-0.6
6,632,820	+		PFLU_RS29840	0.80	-0.0
6,632,820	+		PFLU_RS29840	0.80	+0.2
6,632,820	+		PFLU_RS29840	0.80	-0.1
6,632,820	+		PFLU_RS29840	0.80	-1.8
6,632,821	-		PFLU_RS29840	0.80	+0.5
6,632,821	-		PFLU_RS29840	0.80	-1.0
6,632,821	-		PFLU_RS29840	0.80	-0.2
6,632,821	-		PFLU_RS29840	0.80	-0.1
6,632,821	-		PFLU_RS29840	0.80	-1.7
6,632,821	-		PFLU_RS29840	0.80	-0.3
6,632,821	-		PFLU_RS29840	0.80	+1.2
6,632,821	-		PFLU_RS29840	0.80	+1.6
6,632,821	-		PFLU_RS29840	0.80	+0.5
6,632,821	-		PFLU_RS29840	0.80	-1.5
6,632,821	-		PFLU_RS29840	0.80	+0.8
6,632,821	-		PFLU_RS29840	0.80	-0.7
6,632,824	+		PFLU_RS29840	0.80	-0.3
6,632,824	+		PFLU_RS29840	0.80	+0.2
6,632,824	+		PFLU_RS29840	0.80	+1.2
6,632,824	+		PFLU_RS29840	0.80	+1.0
6,632,824	+		PFLU_RS29840	0.80	-0.1
6,632,824	+		PFLU_RS29840	0.80	-0.3
6,632,825	-		PFLU_RS29840	0.80	-0.7
6,632,964	+				+0.3
6,632,964	+				+0.7
6,632,964	+				+0.3
6,632,964	+				-0.2
6,632,964	+				+0.3
6,632,964	+				+0.1
6,632,964	+				-0.4
6,632,965	-				-0.5
6,632,965	-				-0.9
6,633,083	+				+0.4
6,633,083	+				+0.2
6,633,083	+				+0.4
6,633,083	+				-0.2
6,633,083	+				-0.6
6,633,083	+				-0.3
6,633,083	+				+0.1
6,633,083	+				+0.3
6,633,083	+				+1.1
6,633,083	-				+1.1
6,633,084	-				-0.3
6,633,084	-				+0.9
6,633,084	-				+1.2
6,633,084	-				+1.3
6,633,087	+				+0.0
6,633,087	+				-1.0
6,633,087	+				-0.2
6,633,088	-				+0.4
6,633,088	-				-1.4
6,633,088	-				-0.4
6,633,114	+				+0.8
6,633,115	-				+0.1
6,633,115	-				-0.1
6,633,115	-				+0.3
6,633,143	+				-0.1
6,633,143	+				-1.0
6,633,175	+				-1.1
6,633,175	+				+0.2
6,633,176	-				+0.0
6,633,176	-				+0.5
6,633,176	-				-1.7
6,633,267	+				-1.7
6,633,267	+				-0.9
6,633,267	+				+1.0
6,633,267	+				-0.5
6,633,268	-				-0.9
6,633,458	+				-0.3
6,633,458	+				-1.0
6,633,458	+				+1.3
6,633,458	+				-0.0
6,633,459	-				-0.2
6,633,459	-				+0.8
6,633,459	-				+0.4
6,633,459	-				-0.1
6,633,459	-				+0.4
6,633,459	-				+0.7
6,633,459	-				-2.3
6,633,563	+				-0.0
6,633,563	+				-0.4
6,633,660	+		PFLU_RS29845	0.10	+0.6
6,633,660	+		PFLU_RS29845	0.10	-0.4
6,633,660	+		PFLU_RS29845	0.10	+0.2
6,633,661	-		PFLU_RS29845	0.10	-0.9
6,633,661	-		PFLU_RS29845	0.10	-0.9
6,633,661	-		PFLU_RS29845	0.10	-0.4
6,633,661	-		PFLU_RS29845	0.10	-0.5
6,633,661	-		PFLU_RS29845	0.10	+0.6
6,633,661	-		PFLU_RS29845	0.10	-1.8
6,633,661	-		PFLU_RS29845	0.10	-0.6
6,633,661	-		PFLU_RS29845	0.10	+1.5
6,633,661	-		PFLU_RS29845	0.10	-0.4
6,633,661	-		PFLU_RS29845	0.10	-0.1
6,633,661	-		PFLU_RS29845	0.10	-0.1
6,633,661	-		PFLU_RS29845	0.10	-1.6
6,633,755	+		PFLU_RS29845	0.12	+2.2
6,633,755	+		PFLU_RS29845	0.12	+1.2
6,633,755	+		PFLU_RS29845	0.12	-0.5
6,633,755	+		PFLU_RS29845	0.12	-0.2
6,633,755	+		PFLU_RS29845	0.12	+0.0
6,633,755	+		PFLU_RS29845	0.12	+1.6
6,633,755	+		PFLU_RS29845	0.12	-2.4
6,633,755	+		PFLU_RS29845	0.12	-0.5
6,633,755	+		PFLU_RS29845	0.12	-2.3
6,633,755	+		PFLU_RS29845	0.12	+0.3
6,633,755	+		PFLU_RS29845	0.12	-0.9
6,633,755	+		PFLU_RS29845	0.12	+0.5
6,633,755	+		PFLU_RS29845	0.12	-1.1
6,633,755	+		PFLU_RS29845	0.12	-0.3
6,633,755	+		PFLU_RS29845	0.12	-0.1
6,633,756	-		PFLU_RS29845	0.12	-0.3
6,633,756	-		PFLU_RS29845	0.12	+0.7
6,633,756	-		PFLU_RS29845	0.12	+0.3
6,633,756	-		PFLU_RS29845	0.12	-2.7
6,633,756	-		PFLU_RS29845	0.12	+1.4
6,633,756	-		PFLU_RS29845	0.12	+0.3
6,633,756	-		PFLU_RS29845	0.12	-2.2
6,633,756	-		PFLU_RS29845	0.12	-0.9
6,633,756	-		PFLU_RS29845	0.12	-0.3
6,633,756	-		PFLU_RS29845	0.12	+0.9
6,633,756	-		PFLU_RS29845	0.12	+0.3
6,633,770	+		PFLU_RS29845	0.13	-1.3
6,633,771	-		PFLU_RS29845	0.13	+0.3
6,633,781	+		PFLU_RS29845	0.13	+0.2
6,633,829	+		PFLU_RS29845	0.14	-0.7
6,633,830	-		PFLU_RS29845	0.14	+0.4
6,633,830	-		PFLU_RS29845	0.14	-0.0
6,633,932	+		PFLU_RS29845	0.16	-0.1
6,633,933	-		PFLU_RS29845	0.16	+0.0
6,633,933	-		PFLU_RS29845	0.16	+1.2
6,633,933	-		PFLU_RS29845	0.16	+0.8
6,634,013	+		PFLU_RS29845	0.18	+1.4
6,634,013	+		PFLU_RS29845	0.18	+0.6
6,634,014	-		PFLU_RS29845	0.18	+1.8
6,634,220	+		PFLU_RS29845	0.22	+0.6
6,634,220	+		PFLU_RS29845	0.22	+1.1
6,634,221	-		PFLU_RS29845	0.22	+1.1
6,634,229	+		PFLU_RS29845	0.23	-0.5
6,634,229	+		PFLU_RS29845	0.23	-1.0
6,634,229	+		PFLU_RS29845	0.23	+0.2
6,634,229	+		PFLU_RS29845	0.23	+0.8
6,634,230	-		PFLU_RS29845	0.23	-1.4
6,634,230	-		PFLU_RS29845	0.23	-1.1
6,634,230	-		PFLU_RS29845	0.23	+0.3
6,634,230	-		PFLU_RS29845	0.23	-0.9
6,634,277	+		PFLU_RS29845	0.24	+1.6
6,634,277	+		PFLU_RS29845	0.24	-1.1
6,634,277	+		PFLU_RS29845	0.24	+1.4
6,634,277	+		PFLU_RS29845	0.24	-1.0
6,634,277	+		PFLU_RS29845	0.24	-0.6
6,634,277	+		PFLU_RS29845	0.24	-0.5
6,634,277	+		PFLU_RS29845	0.24	-1.1
6,634,277	+		PFLU_RS29845	0.24	+0.1
6,634,277	+		PFLU_RS29845	0.24	+0.6
6,634,277	+		PFLU_RS29845	0.24	-0.0
6,634,277	+		PFLU_RS29845	0.24	-0.9
6,634,277	+		PFLU_RS29845	0.24	-1.0
6,634,277	+		PFLU_RS29845	0.24	-0.3
6,634,277	+		PFLU_RS29845	0.24	-0.4
6,634,277	+		PFLU_RS29845	0.24	-0.0
6,634,277	+		PFLU_RS29845	0.24	+0.2
6,634,277	+		PFLU_RS29845	0.24	-2.7
6,634,278	-		PFLU_RS29845	0.24	+0.4
6,634,278	-		PFLU_RS29845	0.24	-1.0
6,634,278	-		PFLU_RS29845	0.24	+0.4
6,634,278	-		PFLU_RS29845	0.24	-1.0
6,634,278	-		PFLU_RS29845	0.24	-0.5
6,634,278	-		PFLU_RS29845	0.24	+0.1
6,634,278	-		PFLU_RS29845	0.24	-0.5
6,634,278	-		PFLU_RS29845	0.24	-1.0
6,634,278	-		PFLU_RS29845	0.24	+1.2
6,634,278	-		PFLU_RS29845	0.24	+1.0
6,634,278	-		PFLU_RS29845	0.24	+0.6
6,634,278	-		PFLU_RS29845	0.24	+0.3
6,634,278	-		PFLU_RS29845	0.24	-0.7
6,634,278	-		PFLU_RS29845	0.24	+0.1
6,634,279	+		PFLU_RS29845	0.24	-0.4
6,634,279	+		PFLU_RS29845	0.24	+0.3
6,634,280	-		PFLU_RS29845	0.24	-1.3
6,634,517	+		PFLU_RS29845	0.29	+0.9
6,634,517	+		PFLU_RS29845	0.29	-2.3
6,634,559	+		PFLU_RS29845	0.30	+1.1
6,634,559	+		PFLU_RS29845	0.30	-0.1
6,634,559	+		PFLU_RS29845	0.30	-0.6
6,634,559	+		PFLU_RS29845	0.30	+0.8
6,634,559	+		PFLU_RS29845	0.30	-0.4
6,634,560	-		PFLU_RS29845	0.30	+0.7
6,634,560	-		PFLU_RS29845	0.30	-1.1
6,634,560	-		PFLU_RS29845	0.30	+0.4
6,634,560	-		PFLU_RS29845	0.30	+0.7
6,634,560	-		PFLU_RS29845	0.30	-0.7
6,634,576	+		PFLU_RS29845	0.30	+0.8
6,634,601	+		PFLU_RS29845	0.30	+1.6
6,634,667	+		PFLU_RS29845	0.32	+1.4
6,634,667	+		PFLU_RS29845	0.32	-0.3
6,634,712	+		PFLU_RS29845	0.33	-0.0
6,634,712	+		PFLU_RS29845	0.33	-0.0
6,634,712	+		PFLU_RS29845	0.33	-0.3
6,634,712	+		PFLU_RS29845	0.33	+0.0
6,634,712	+		PFLU_RS29845	0.33	+0.5
6,634,712	+		PFLU_RS29845	0.33	+0.6
6,634,713	-		PFLU_RS29845	0.33	+0.4
6,634,713	-		PFLU_RS29845	0.33	+0.3
6,634,713	-		PFLU_RS29845	0.33	-0.1
6,634,757	+		PFLU_RS29845	0.34	-0.7
6,634,757	+		PFLU_RS29845	0.34	+0.5
6,634,757	+		PFLU_RS29845	0.34	-0.8
6,634,758	-		PFLU_RS29845	0.34	-1.9
6,634,988	+		PFLU_RS29845	0.39	-2.1
6,634,989	-		PFLU_RS29845	0.39	-0.8
6,635,073	+		PFLU_RS29845	0.41	-0.3
6,635,074	-		PFLU_RS29845	0.41	-0.2
6,635,107	+		PFLU_RS29845	0.41	-1.0
6,635,107	+		PFLU_RS29845	0.41	+1.4
6,635,190	-		PFLU_RS29845	0.43	-0.3
6,635,190	-		PFLU_RS29845	0.43	-0.2
6,635,190	-		PFLU_RS29845	0.43	+0.6
6,635,190	-		PFLU_RS29845	0.43	+0.4
6,635,190	-		PFLU_RS29845	0.43	+0.6
6,635,406	+		PFLU_RS29845	0.48	-1.0
6,635,407	-		PFLU_RS29845	0.48	+0.4
6,635,443	+		PFLU_RS29845	0.48	-3.0
6,635,443	+		PFLU_RS29845	0.48	+0.5
6,635,443	+		PFLU_RS29845	0.48	-1.0
6,635,443	+		PFLU_RS29845	0.48	+1.4
6,635,443	+		PFLU_RS29845	0.48	+0.1
6,635,443	+		PFLU_RS29845	0.48	-2.7
6,635,443	+		PFLU_RS29845	0.48	+0.2
6,635,444	-		PFLU_RS29845	0.48	+1.1
6,635,444	-		PFLU_RS29845	0.48	-0.2
6,635,444	-		PFLU_RS29845	0.48	+0.1
6,635,444	-		PFLU_RS29845	0.48	-2.8
6,635,444	-		PFLU_RS29845	0.48	+0.5
6,635,444	-		PFLU_RS29845	0.48	+0.4
6,635,444	-		PFLU_RS29845	0.48	+0.3
6,635,444	-		PFLU_RS29845	0.48	-0.1
6,635,444	-		PFLU_RS29845	0.48	+0.9
6,635,444	-		PFLU_RS29845	0.48	+0.9
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6,635,445	+		PFLU_RS29845	0.48	-0.1
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6,635,445	+		PFLU_RS29845	0.48	+0.2
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6,635,445	+		PFLU_RS29845	0.48	-0.2
6,635,445	+		PFLU_RS29845	0.48	-0.1
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6,635,684	-		PFLU_RS29845	0.54	-1.0
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6,635,783	+		PFLU_RS29845	0.56	+0.7
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6,635,783	+		PFLU_RS29845	0.56	+0.4
6,635,783	+		PFLU_RS29845	0.56	-2.3
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6,635,783	+		PFLU_RS29845	0.56	-1.6
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6,635,784	-		PFLU_RS29845	0.56	-0.8
6,635,784	-		PFLU_RS29845	0.56	-3.1
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6,636,260	+		PFLU_RS29845	0.66	-2.0
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6,636,428	+		PFLU_RS29845	0.69	-0.4
6,636,428	+		PFLU_RS29845	0.69	+1.1
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6,636,600	+		PFLU_RS29845	0.73	-0.0
6,636,600	+		PFLU_RS29845	0.73	+1.5
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6,636,903	+		PFLU_RS29845	0.80	-2.6
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6,637,086	+		PFLU_RS29845	0.84	-1.1
6,637,086	+		PFLU_RS29845	0.84	-1.1
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6,637,087	-		PFLU_RS29845	0.84	+1.0
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6,637,229	-		PFLU_RS29845	0.87	-0.1
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6,637,291	+		PFLU_RS29845	0.88	+0.4
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6,637,459	+				+1.8
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6,637,459	+				-0.5
6,637,459	+				-0.8
6,637,459	+				-1.1
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6,637,500	+				+1.1
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6,637,501	-				+1.5
6,637,501	-				-1.8
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6,638,050	-		PFLU_RS29850	0.15	+0.7
6,638,163	+		PFLU_RS29850	0.22	+0.6
6,638,164	-		PFLU_RS29850	0.22	+0.3
6,638,164	-		PFLU_RS29850	0.22	+0.7
6,638,339	+		PFLU_RS29850	0.33	-0.2
6,638,339	+		PFLU_RS29850	0.33	+0.0
6,638,339	+		PFLU_RS29850	0.33	-0.8
6,638,339	+		PFLU_RS29850	0.33	-1.3
6,638,339	+		PFLU_RS29850	0.33	-0.7
6,638,339	+		PFLU_RS29850	0.33	-0.8
6,638,340	-		PFLU_RS29850	0.33	-0.2
6,638,340	-		PFLU_RS29850	0.33	+0.5
6,638,414	+		PFLU_RS29850	0.38	+0.9
6,638,414	+		PFLU_RS29850	0.38	+0.2
6,638,414	+		PFLU_RS29850	0.38	-0.1
6,638,415	-		PFLU_RS29850	0.38	+0.3
6,638,415	-		PFLU_RS29850	0.38	-1.0
6,638,425	+		PFLU_RS29850	0.39	-0.0
6,638,425	+		PFLU_RS29850	0.39	+0.3
6,638,425	+		PFLU_RS29850	0.39	-0.1
6,638,426	-		PFLU_RS29850	0.39	+0.4
6,638,426	-		PFLU_RS29850	0.39	+0.1
6,638,426	-		PFLU_RS29850	0.39	-1.7
6,638,426	-		PFLU_RS29850	0.39	+2.5
6,638,426	-		PFLU_RS29850	0.39	+0.6
6,638,426	-		PFLU_RS29850	0.39	-3.2
6,638,426	-		PFLU_RS29850	0.39	-1.1
6,638,426	-		PFLU_RS29850	0.39	-0.6
6,638,426	-		PFLU_RS29850	0.39	-0.6
6,638,525	+		PFLU_RS29850	0.45	-1.4
6,638,525	+		PFLU_RS29850	0.45	-1.5
6,638,525	+		PFLU_RS29850	0.45	+0.5
6,638,525	+		PFLU_RS29850	0.45	+0.6
6,638,525	+		PFLU_RS29850	0.45	-0.5
6,638,525	+		PFLU_RS29850	0.45	+0.8
6,638,525	+		PFLU_RS29850	0.45	+1.3
6,638,591	-		PFLU_RS29850	0.49	-0.2
6,638,680	+		PFLU_RS29850	0.55	+0.6
6,638,680	+		PFLU_RS29850	0.55	-1.7
6,638,681	-		PFLU_RS29850	0.55	+1.6
6,638,734	+		PFLU_RS29850	0.59	-0.0
6,638,735	-		PFLU_RS29850	0.59	-0.5
6,638,735	-		PFLU_RS29850	0.59	-0.6
6,638,735	-		PFLU_RS29850	0.59	+0.2
6,638,777	+		PFLU_RS29850	0.61	-1.1
6,638,777	+		PFLU_RS29850	0.61	-0.7
6,638,777	+		PFLU_RS29850	0.61	-1.0
6,638,777	+		PFLU_RS29850	0.61	-0.2
6,638,778	-		PFLU_RS29850	0.61	-1.1
6,638,825	+		PFLU_RS29850	0.64	+0.3
6,638,825	+		PFLU_RS29850	0.64	-0.0
6,638,826	-		PFLU_RS29850	0.65	-1.0
6,638,826	-		PFLU_RS29850	0.65	+0.2