Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29785

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
6,619,449	+				+0.5
6,619,449	+				-0.9
6,619,567	+				+1.3
6,619,567	+				+0.2
6,619,567	+				-0.5
6,619,567	+				-0.2
6,619,567	+				-1.0
6,619,568	-				+0.6
6,619,568	-				-0.2
6,619,568	-				+0.0
6,619,568	-				-0.0
6,619,568	-				-0.2
6,619,568	-				+0.6
6,619,568	-				+0.4
6,619,568	-				-0.5
6,619,568	-				-1.2
6,619,568	-				-1.7
6,619,569	+				+0.5
6,619,569	+				-1.4
6,619,569	+				-0.5
6,619,569	+				-0.8
6,619,569	+				-0.3
6,619,569	+				+0.0
6,619,569	+				+0.2
6,619,569	+				+0.6
6,619,569	+				+0.2
6,619,569	+				+0.5
6,619,569	+				+0.1
6,619,569	+				+0.4
6,619,569	+				-1.0
6,619,570	-				-0.9
6,619,570	-				+0.7
6,619,570	-				-1.6
6,619,570	-				+0.7
6,619,570	-				-2.6
6,619,570	-				-2.0
6,619,570	-				+0.5
6,619,570	-				-0.9
6,619,570	-				-0.6
6,619,570	-				-0.8
6,619,570	-				-0.6
6,619,570	-				-0.3
6,619,570	-				+1.2
6,619,570	-				-0.8
6,619,570	-				+1.0
6,619,570	-				-2.2
6,619,570	-				+1.5
6,619,570	-				-1.4
6,619,573	-				-0.2
6,619,573	-				-2.3
6,619,573	-				+0.7
6,619,573	-				-0.3
6,619,625	-				-0.0
6,619,625	-				+0.1
6,619,638	+				+0.3
6,619,638	+				-0.0
6,619,683	-				+0.5
6,619,691	+				+0.1
6,619,691	+				+0.3
6,619,696	-				+0.1
6,619,745	+				-0.4
6,619,745	+				+0.5
6,619,745	+				-0.1
6,619,746	-				-0.2
6,619,746	-				+0.7
6,619,746	-				-0.9
6,619,842	+				-0.6
6,619,842	+				-1.1
6,619,842	+				+1.5
6,619,843	-				-0.2
6,619,843	-				+2.1
6,619,845	+				-0.5
6,619,846	-				+1.3
6,619,846	-				+3.2
6,619,846	-				+0.0
6,619,846	-				+1.5
6,619,846	-				+1.2
6,619,846	-				+0.4
6,619,846	-				+1.0
6,619,852	+				-0.2
6,619,875	+				+0.2
6,619,875	+				-0.7
6,619,875	+				-0.5
6,619,875	+				-0.9
6,619,875	+				-1.6
6,619,875	+				-0.3
6,619,875	+				+0.0
6,619,875	+				-0.2
6,619,875	+				+0.4
6,619,875	+				+0.3
6,619,875	+				+1.8
6,619,875	+				+1.0
6,619,875	+				-0.2
6,619,875	+				+0.2
6,619,876	-				-1.3
6,619,876	-				+0.2
6,619,876	-				+2.5
6,619,876	-				+1.5
6,619,876	-				+1.6
6,619,876	-				+1.4
6,619,876	-				+0.2
6,619,876	-				-0.8
6,619,876	-				+1.1
6,619,876	-				+0.6
6,619,876	-				+1.0
6,619,876	-				+0.2
6,619,876	-				+2.6
6,619,876	-				+0.4
6,619,876	-				+1.5
6,619,876	-				+0.8
6,619,876	-				+1.4
6,619,923	+				+0.5
6,619,923	+				-0.5
6,619,923	+				+0.4
6,619,923	+				-0.6
6,619,924	-				+1.0
6,619,924	-				+0.4
6,619,924	-				+0.4
6,619,924	-				-0.6
6,619,985	+				+1.3
6,620,142	-		PFLU_RS29780	0.45	+2.0
6,620,196	+		PFLU_RS29780	0.59	+0.9
6,620,196	+		PFLU_RS29780	0.59	+1.0
6,620,196	+		PFLU_RS29780	0.59	+0.4
6,620,196	+		PFLU_RS29780	0.59	-1.8
6,620,196	+		PFLU_RS29780	0.59	+1.1
6,620,196	+		PFLU_RS29780	0.59	-0.8
6,620,197	-		PFLU_RS29780	0.59	+1.3
6,620,197	-		PFLU_RS29780	0.59	-0.1
6,620,197	-		PFLU_RS29780	0.59	+0.2
6,620,197	-		PFLU_RS29780	0.59	+0.4
6,620,197	-		PFLU_RS29780	0.59	+1.3
6,620,197	-		PFLU_RS29780	0.59	+1.5
6,620,197	-		PFLU_RS29780	0.59	+2.2
6,620,305	+		PFLU_RS29780	0.85	+0.3
6,620,306	-		PFLU_RS29780	0.86	+1.0
6,620,362	-				-1.0
6,620,407	+				-0.5
6,620,407	+				+0.2
6,620,407	+				-0.1
6,620,407	+				-0.0
6,620,407	+				+1.3
6,620,407	+				-0.9
6,620,407	+				-2.0
6,620,408	-				+0.5
6,620,408	-				+0.3
6,620,408	-				-0.9
6,620,420	+				+0.9
6,620,420	+				-0.9
6,620,420	+				+0.4
6,620,421	-				-0.1
6,620,421	-				+0.3
6,620,421	-				-1.4
6,620,421	-				+1.5
6,620,426	+				+0.8
6,620,426	+				+0.3
6,620,427	-				+1.8
6,620,427	-				-1.7
6,620,522	+		PFLU_RS29785	0.11	+0.3
6,620,522	+		PFLU_RS29785	0.11	-1.1
6,620,522	+		PFLU_RS29785	0.11	-1.6
6,620,522	+		PFLU_RS29785	0.11	+0.3
6,620,522	+		PFLU_RS29785	0.11	-1.3
6,620,522	+		PFLU_RS29785	0.11	+1.4
6,620,522	+		PFLU_RS29785	0.11	+0.2
6,620,522	+		PFLU_RS29785	0.11	+0.7
6,620,522	+		PFLU_RS29785	0.11	+0.6
6,620,522	+		PFLU_RS29785	0.11	-0.3
6,620,522	+		PFLU_RS29785	0.11	+0.2
6,620,522	+		PFLU_RS29785	0.11	+0.1
6,620,522	+		PFLU_RS29785	0.11	-0.2
6,620,522	+		PFLU_RS29785	0.11	+0.8
6,620,522	+		PFLU_RS29785	0.11	-0.7
6,620,522	+		PFLU_RS29785	0.11	+0.1
6,620,522	+		PFLU_RS29785	0.11	-0.6
6,620,522	+		PFLU_RS29785	0.11	-0.6
6,620,522	+		PFLU_RS29785	0.11	+1.0
6,620,522	+		PFLU_RS29785	0.11	-2.0
6,620,522	+		PFLU_RS29785	0.11	-0.2
6,620,522	+		PFLU_RS29785	0.11	+0.7
6,620,522	+		PFLU_RS29785	0.11	-0.4
6,620,523	-		PFLU_RS29785	0.11	+0.1
6,620,523	-		PFLU_RS29785	0.11	+0.7
6,620,523	-		PFLU_RS29785	0.11	-0.0
6,620,523	-		PFLU_RS29785	0.11	+0.8
6,620,523	-		PFLU_RS29785	0.11	-1.0
6,620,523	-		PFLU_RS29785	0.11	-1.4
6,620,523	-		PFLU_RS29785	0.11	+1.2
6,620,523	-		PFLU_RS29785	0.11	-0.7
6,620,523	-		PFLU_RS29785	0.11	-0.3
6,620,523	-		PFLU_RS29785	0.11	+0.7
6,620,523	-		PFLU_RS29785	0.11	-0.0
6,620,523	-		PFLU_RS29785	0.11	+0.8
6,620,523	-		PFLU_RS29785	0.11	-0.5
6,620,523	-		PFLU_RS29785	0.11	+0.5
6,620,523	-		PFLU_RS29785	0.11	+0.1
6,620,523	-		PFLU_RS29785	0.11	+0.2
6,620,523	-		PFLU_RS29785	0.11	+0.9
6,620,523	-		PFLU_RS29785	0.11	+0.9
6,620,523	-		PFLU_RS29785	0.11	+0.7
6,620,523	-		PFLU_RS29785	0.11	+0.6
6,620,523	-		PFLU_RS29785	0.11	+0.8
6,620,523	-		PFLU_RS29785	0.11	-0.9
6,620,524	+		PFLU_RS29785	0.11	-0.1
6,620,524	+		PFLU_RS29785	0.11	-0.0
6,620,524	+		PFLU_RS29785	0.11	+1.0
6,620,524	+		PFLU_RS29785	0.11	+0.0
6,620,524	+		PFLU_RS29785	0.11	+0.1
6,620,524	+		PFLU_RS29785	0.11	+0.2
6,620,524	+		PFLU_RS29785	0.11	+0.4
6,620,524	+		PFLU_RS29785	0.11	-1.7
6,620,524	+		PFLU_RS29785	0.11	+0.1
6,620,524	+		PFLU_RS29785	0.11	-0.3
6,620,524	+		PFLU_RS29785	0.11	-0.2
6,620,524	+		PFLU_RS29785	0.11	-1.1
6,620,524	+		PFLU_RS29785	0.11	+0.2
6,620,524	+		PFLU_RS29785	0.11	+0.3
6,620,524	+		PFLU_RS29785	0.11	+0.3
6,620,524	+		PFLU_RS29785	0.11	-0.7
6,620,525	-		PFLU_RS29785	0.12	-0.0
6,620,525	-		PFLU_RS29785	0.12	-1.3
6,620,525	-		PFLU_RS29785	0.12	+0.3
6,620,525	-		PFLU_RS29785	0.12	+0.4
6,620,525	-		PFLU_RS29785	0.12	-0.1
6,620,533	-		PFLU_RS29785	0.12	-1.2
6,620,615	-		PFLU_RS29785	0.22	-0.0
6,620,718	-		PFLU_RS29785	0.33	-0.7
6,620,718	-		PFLU_RS29785	0.33	+2.3
6,620,718	-		PFLU_RS29785	0.33	+0.2
6,620,718	-		PFLU_RS29785	0.33	+1.5
6,620,734	+		PFLU_RS29785	0.35	+0.2
6,620,782	+		PFLU_RS29785	0.40	+0.7
6,620,782	+		PFLU_RS29785	0.40	-0.0
6,620,783	-		PFLU_RS29785	0.40	+0.0
6,620,928	+		PFLU_RS29785	0.56	+0.0
6,620,928	+		PFLU_RS29785	0.56	-1.3
6,620,928	+		PFLU_RS29785	0.56	+2.2
6,620,928	+		PFLU_RS29785	0.56	+0.9
6,620,928	+		PFLU_RS29785	0.56	-1.4
6,620,928	+		PFLU_RS29785	0.56	-0.7
6,620,928	+		PFLU_RS29785	0.56	+0.2
6,620,928	+		PFLU_RS29785	0.56	-1.2
6,620,928	+		PFLU_RS29785	0.56	-0.3
6,620,928	+		PFLU_RS29785	0.56	-2.0
6,620,928	+		PFLU_RS29785	0.56	+0.8
6,620,929	-		PFLU_RS29785	0.56	-0.4
6,620,929	-		PFLU_RS29785	0.56	+1.2
6,620,929	-		PFLU_RS29785	0.56	-0.8
6,620,929	-		PFLU_RS29785	0.56	+0.8
6,620,929	-		PFLU_RS29785	0.56	+0.1
6,620,929	-		PFLU_RS29785	0.56	-1.8
6,620,929	-		PFLU_RS29785	0.56	+0.3
6,620,952	-		PFLU_RS29785	0.59	+0.9
6,620,985	+		PFLU_RS29785	0.63	-0.6
6,620,985	+		PFLU_RS29785	0.63	-0.8
6,620,985	+		PFLU_RS29785	0.63	-0.2
6,620,985	+		PFLU_RS29785	0.63	-1.6
6,620,985	+		PFLU_RS29785	0.63	+0.9
6,620,985	+		PFLU_RS29785	0.63	-0.0
6,620,985	+		PFLU_RS29785	0.63	-0.0
6,620,985	+		PFLU_RS29785	0.63	-0.2
6,620,985	+		PFLU_RS29785	0.63	-0.1
6,620,985	+		PFLU_RS29785	0.63	+0.2
6,620,985	+		PFLU_RS29785	0.63	-2.5
6,620,985	+		PFLU_RS29785	0.63	+1.0
6,620,985	+		PFLU_RS29785	0.63	+1.2
6,620,985	+		PFLU_RS29785	0.63	-0.4
6,620,985	+		PFLU_RS29785	0.63	+0.9
6,620,986	-		PFLU_RS29785	0.63	+1.3
6,620,986	-		PFLU_RS29785	0.63	+1.4
6,620,986	-		PFLU_RS29785	0.63	-2.5
6,620,986	-		PFLU_RS29785	0.63	+0.1
6,620,986	-		PFLU_RS29785	0.63	+0.4
6,620,986	-		PFLU_RS29785	0.63	-1.3
6,620,986	-		PFLU_RS29785	0.63	-0.4
6,620,986	-		PFLU_RS29785	0.63	-1.0
6,620,986	-		PFLU_RS29785	0.63	+1.1
6,620,986	-		PFLU_RS29785	0.63	+3.5
6,620,986	-		PFLU_RS29785	0.63	+0.7
6,620,986	-		PFLU_RS29785	0.63	-0.8
6,621,063	+		PFLU_RS29785	0.71	+0.3
6,621,063	+		PFLU_RS29785	0.71	-1.9
6,621,064	-		PFLU_RS29785	0.71	+0.1
6,621,064	-		PFLU_RS29785	0.71	-0.5
6,621,064	-		PFLU_RS29785	0.71	-0.3
6,621,064	-		PFLU_RS29785	0.71	+0.1
6,621,089	+		PFLU_RS29785	0.74	+0.7
6,621,089	+		PFLU_RS29785	0.74	+1.1
6,621,090	-		PFLU_RS29785	0.74	+0.1
6,621,090	-		PFLU_RS29785	0.74	-1.7
6,621,318	+				-2.1
6,621,319	-				-1.1
6,621,319	-				-0.4
6,621,367	+				-0.2
6,621,367	+				+0.7
6,621,367	+				-0.4
6,621,368	-				+0.7
6,621,368	-				-0.5
6,621,368	-				-0.6
6,621,368	-				+1.9
6,621,374	-				-0.6
6,621,430	+				+1.0
6,621,430	+				+0.3
6,621,430	+				+0.6
6,621,430	+				-1.0
6,621,430	+				-0.7
6,621,430	+				+0.2
6,621,432	+				-0.6
6,621,432	+				+0.6
6,621,432	+				-0.9
6,621,432	+				-1.0
6,621,432	+				-0.1
6,621,432	+				+0.0
6,621,432	+				+0.6
6,621,432	+				+0.1
6,621,432	+				-0.7
6,621,432	+				+0.4
6,621,432	+				+0.8
6,621,432	+				-0.6
6,621,432	+				-0.4
6,621,432	+				+1.2
6,621,432	+				-1.5
6,621,432	+				-1.3
6,621,432	+				-1.3
6,621,432	+				+1.3
6,621,432	+				+0.2
6,621,432	+				+0.1
6,621,432	+				-0.9
6,621,432	+				+0.6
6,621,432	+				-2.2
6,621,432	+				+0.5
6,621,432	+				+0.5
6,621,432	+				-1.4
6,621,432	+				+1.3
6,621,432	+				-0.7
6,621,432	+				+0.5
6,621,432	+				+0.7
6,621,432	+				-0.3
6,621,432	+				-0.4
6,621,432	+				+0.2
6,621,432	+				-0.1
6,621,432	+				-0.0
6,621,432	+				+0.8
6,621,432	+				+1.4
6,621,432	+				-0.4
6,621,432	+				-0.7
6,621,433	-				+1.2
6,621,433	-				-1.9
6,621,433	-				-0.2
6,621,433	-				+0.1
6,621,433	-				-1.5
6,621,433	-				-0.1
6,621,433	-				-0.2
6,621,433	-				-1.2
6,621,433	-				+0.6
6,621,433	-				-1.1
6,621,433	-				+0.7
6,621,433	-				+0.2
6,621,433	-				-1.5
6,621,433	-				+0.2
6,621,433	-				+0.1
6,621,433	-				-2.0
6,621,433	-				-0.4
6,621,433	-				-0.7
6,621,433	-				-0.3
6,621,433	-				+0.5
6,621,433	-				-0.1
6,621,433	-				+1.2
6,621,433	-				+0.4
6,621,433	-				+0.0
6,621,433	-				+0.7
6,621,433	-				-0.1
6,621,433	-				-2.8
6,621,433	-				+0.2
6,621,433	-				+0.2
6,621,433	-				+0.0
6,621,433	-				+0.2
6,621,514	+		PFLU_RS29790	0.13	+1.2
6,621,561	+		PFLU_RS29790	0.22	+0.1
6,621,561	+		PFLU_RS29790	0.22	-1.8
6,621,561	+		PFLU_RS29790	0.22	-0.8
6,621,561	+		PFLU_RS29790	0.22	-0.4
6,621,561	+		PFLU_RS29790	0.22	+1.4
6,621,561	+		PFLU_RS29790	0.22	-0.9
6,621,561	+		PFLU_RS29790	0.22	-0.3
6,621,562	-		PFLU_RS29790	0.22	+1.0
6,621,562	-		PFLU_RS29790	0.22	+0.4
6,621,562	-		PFLU_RS29790	0.22	-0.4
6,621,562	-		PFLU_RS29790	0.22	-1.3
6,621,562	-		PFLU_RS29790	0.22	+0.3
6,621,562	-		PFLU_RS29790	0.22	+0.1
6,621,613	+		PFLU_RS29790	0.32	+0.4
6,621,613	+		PFLU_RS29790	0.32	-0.0
6,621,614	-		PFLU_RS29790	0.32	-0.6
6,621,652	-		PFLU_RS29790	0.39	-0.7
6,621,765	+		PFLU_RS29790	0.60	-0.7
6,621,765	+		PFLU_RS29790	0.60	-0.8
6,621,765	+		PFLU_RS29790	0.60	-1.9
6,621,765	+		PFLU_RS29790	0.60	+0.4
6,621,765	+		PFLU_RS29790	0.60	-1.4
6,621,765	+		PFLU_RS29790	0.60	-0.9
6,621,765	+		PFLU_RS29790	0.60	-0.7
6,621,765	+		PFLU_RS29790	0.60	-1.3
6,621,765	+		PFLU_RS29790	0.60	-0.2
6,621,765	+		PFLU_RS29790	0.60	+0.1
6,621,765	+		PFLU_RS29790	0.60	-1.7
6,621,766	-		PFLU_RS29790	0.60	+0.4
6,621,766	-		PFLU_RS29790	0.60	-0.4
6,621,766	-		PFLU_RS29790	0.60	-0.2
6,621,766	-		PFLU_RS29790	0.60	-0.4
6,621,766	-		PFLU_RS29790	0.60	+0.8
6,621,766	-		PFLU_RS29790	0.60	-0.8
6,621,766	-		PFLU_RS29790	0.60	-0.6
6,621,766	-		PFLU_RS29790	0.60	+1.1
6,621,947	+				+0.3
6,621,947	+				+0.2
6,621,947	+				-0.2
6,621,947	+				-0.9
6,621,947	+				-0.6
6,621,947	+				-1.0
6,621,947	+				-1.3
6,621,948	-				+0.2
6,621,948	-				+0.4
6,621,950	+				-0.2
6,621,950	+				-0.7
6,621,951	-				-0.1
6,621,951	-				+0.1
6,621,951	-				-1.1
6,621,951	-				-1.3
6,621,951	-				+0.3
6,621,951	-				-1.5
6,621,953	+				-1.9
6,621,953	+				-1.0
6,621,954	-				-1.0
6,621,954	-				-1.4
6,621,954	-				+0.3
6,621,954	-				-0.2
6,621,954	-				-0.1
6,621,954	-				-0.2
6,621,954	-				+0.4
6,621,954	-				-1.9
6,621,954	-				-2.2
6,621,954	-				+0.1
6,621,998	+				-0.1
6,621,999	-				+0.4
6,622,015	+				-1.8
6,622,016	-				+1.2
6,622,054	+				-1.8
6,622,081	-				-0.3
6,622,081	-				-0.2
6,622,081	-				-0.3
6,622,146	+		PFLU_RS29795	0.36	-0.9
6,622,146	+		PFLU_RS29795	0.36	-0.4
6,622,147	-		PFLU_RS29795	0.36	+0.1
6,622,147	-		PFLU_RS29795	0.36	+0.4
6,622,147	-		PFLU_RS29795	0.36	-0.6
6,622,170	+		PFLU_RS29795	0.46	+0.6
6,622,170	+		PFLU_RS29795	0.46	-1.0
6,622,170	+		PFLU_RS29795	0.46	+0.7
6,622,170	+		PFLU_RS29795	0.46	+0.2
6,622,170	+		PFLU_RS29795	0.46	-2.1
6,622,171	-		PFLU_RS29795	0.46	+0.2
6,622,171	-		PFLU_RS29795	0.46	-0.3
6,622,171	-		PFLU_RS29795	0.46	-1.3