Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29090

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
6,466,690	+				+0.3
6,466,690	+				-2.2
6,466,690	+				-0.1
6,466,690	+				-0.2
6,466,690	+				+0.1
6,466,690	+				-0.1
6,466,690	+				-0.3
6,466,690	+				-0.5
6,466,690	+				-0.9
6,466,690	+				+2.2
6,466,690	+				-0.3
6,466,691	-				+0.8
6,466,691	-				+0.2
6,466,691	-				-0.0
6,466,691	-				+1.7
6,466,756	-		PFLU_RS29085	0.17	-1.3
6,466,756	-		PFLU_RS29085	0.17	-0.2
6,466,777	+		PFLU_RS29085	0.20	+1.6
6,466,777	+		PFLU_RS29085	0.20	+1.5
6,466,777	+		PFLU_RS29085	0.20	+0.2
6,466,778	-		PFLU_RS29085	0.20	+0.8
6,466,778	-		PFLU_RS29085	0.20	-0.8
6,466,778	-		PFLU_RS29085	0.20	-1.1
6,466,805	+		PFLU_RS29085	0.24	-0.8
6,466,806	-		PFLU_RS29085	0.24	-0.5
6,466,876	-		PFLU_RS29085	0.35	+0.5
6,466,876	-		PFLU_RS29085	0.35	+1.1
6,466,876	-		PFLU_RS29085	0.35	+1.3
6,466,925	+		PFLU_RS29085	0.43	+1.3
6,466,944	+		PFLU_RS29085	0.45	-0.1
6,466,944	+		PFLU_RS29085	0.45	-0.6
6,466,944	+		PFLU_RS29085	0.45	+0.2
6,466,944	+		PFLU_RS29085	0.45	+0.4
6,466,945	-		PFLU_RS29085	0.46	-0.4
6,466,945	-		PFLU_RS29085	0.46	-0.4
6,466,964	+		PFLU_RS29085	0.49	+0.1
6,466,964	+		PFLU_RS29085	0.49	+0.4
6,466,964	+		PFLU_RS29085	0.49	+1.8
6,466,964	+		PFLU_RS29085	0.49	+0.3
6,466,964	+		PFLU_RS29085	0.49	+1.3
6,466,964	+		PFLU_RS29085	0.49	+0.6
6,466,965	-		PFLU_RS29085	0.49	-1.8
6,466,965	-		PFLU_RS29085	0.49	-0.9
6,466,965	-		PFLU_RS29085	0.49	+0.2
6,466,965	-		PFLU_RS29085	0.49	+1.7
6,466,965	-		PFLU_RS29085	0.49	+0.3
6,466,965	-		PFLU_RS29085	0.49	-0.4
6,466,965	-		PFLU_RS29085	0.49	-0.3
6,466,965	-		PFLU_RS29085	0.49	+0.8
6,466,965	-		PFLU_RS29085	0.49	-0.3
6,466,965	-		PFLU_RS29085	0.49	+0.9
6,467,148	-		PFLU_RS29085	0.77	+0.1
6,467,148	-		PFLU_RS29085	0.77	+0.2
6,467,175	+		PFLU_RS29085	0.81	+1.0
6,467,200	-		PFLU_RS29085	0.85	+0.4
6,467,210	-		PFLU_RS29085	0.86	+0.6
6,467,210	-		PFLU_RS29085	0.86	-0.9
6,467,210	-		PFLU_RS29085	0.86	-0.1
6,467,210	-		PFLU_RS29085	0.86	+0.3
6,467,210	-		PFLU_RS29085	0.86	-0.3
6,467,210	-		PFLU_RS29085	0.86	-0.4
6,467,301	+				+2.5
6,467,302	-				+1.9
6,467,302	-				+1.1
6,467,361	+				+0.2
6,467,362	-				+0.3
6,467,490	-				-0.2
6,467,500	-				+0.6
6,467,623	+				+0.6
6,467,624	-				-1.5
6,467,628	+				+1.0
6,467,628	+				+2.5
6,467,628	+				+0.9
6,467,628	+				+0.5
6,467,629	-				+0.6
6,467,629	-				+0.3
6,467,629	-				+0.9
6,467,629	-				+0.5
6,467,629	-				-0.6
6,467,632	+				+0.7
6,467,632	+				+0.2
6,467,632	+				-0.3
6,467,632	+				+1.6
6,467,632	+				+0.0
6,467,632	+				+0.9
6,467,633	-				-2.0
6,467,633	-				-1.2
6,467,655	+				-0.3
6,467,655	+				+0.9
6,467,655	+				+0.4
6,467,655	+				-0.3
6,467,655	+				+1.2
6,467,655	+				+0.6
6,467,655	+				+1.1
6,467,655	+				+1.5
6,467,655	+				+0.9
6,467,655	+				-0.2
6,467,655	+				+0.6
6,467,655	+				-0.6
6,467,655	+				-0.9
6,467,656	-				-0.1
6,467,656	-				+0.4
6,467,656	-				+0.2
6,467,656	-				+0.1
6,467,656	-				-1.0
6,467,656	-				-0.6
6,467,656	-				+0.9
6,467,656	-				+1.7
6,467,656	-				-0.6
6,467,737	+				+0.4
6,468,077	-		PFLU_RS29090	0.26	+0.4
6,468,114	+		PFLU_RS29090	0.28	-0.8
6,468,115	-		PFLU_RS29090	0.29	-1.5
6,468,115	-		PFLU_RS29090	0.29	+0.2
6,468,255	+		PFLU_RS29090	0.37	+0.6
6,468,255	+		PFLU_RS29090	0.37	-1.4
6,468,256	-		PFLU_RS29090	0.37	+0.6
6,468,256	-		PFLU_RS29090	0.37	-0.2
6,468,256	-		PFLU_RS29090	0.37	-1.2
6,468,256	-		PFLU_RS29090	0.37	-0.9
6,468,256	-		PFLU_RS29090	0.37	-2.4
6,468,256	-		PFLU_RS29090	0.37	-0.1
6,468,267	+		PFLU_RS29090	0.38	-1.5
6,468,267	+		PFLU_RS29090	0.38	-2.6
6,468,267	+		PFLU_RS29090	0.38	-2.5
6,468,267	+		PFLU_RS29090	0.38	-2.1
6,468,268	-		PFLU_RS29090	0.38	-1.3
6,468,312	+		PFLU_RS29090	0.41	-2.6
6,468,312	+		PFLU_RS29090	0.41	-0.8
6,468,312	+		PFLU_RS29090	0.41	-0.1
6,468,313	-		PFLU_RS29090	0.41	-1.1
6,468,313	-		PFLU_RS29090	0.41	+0.1
6,468,545	+		PFLU_RS29090	0.56	-1.1
6,468,545	+		PFLU_RS29090	0.56	-2.1
6,468,545	+		PFLU_RS29090	0.56	-1.0
6,468,545	+		PFLU_RS29090	0.56	-2.3
6,468,545	+		PFLU_RS29090	0.56	-0.7
6,468,545	+		PFLU_RS29090	0.56	-1.8
6,468,546	-		PFLU_RS29090	0.56	-0.3
6,468,546	-		PFLU_RS29090	0.56	-0.7
6,468,546	-		PFLU_RS29090	0.56	-1.8
6,468,548	+		PFLU_RS29090	0.56	-1.4
6,468,548	+		PFLU_RS29090	0.56	+3.5
6,468,548	+		PFLU_RS29090	0.56	-1.8
6,468,548	+		PFLU_RS29090	0.56	-1.8
6,468,549	-		PFLU_RS29090	0.56	-0.8
6,468,549	-		PFLU_RS29090	0.56	-0.4
6,468,549	-		PFLU_RS29090	0.56	-1.9
6,468,549	-		PFLU_RS29090	0.56	-0.6
6,468,549	-		PFLU_RS29090	0.56	+0.8
6,468,549	-		PFLU_RS29090	0.56	-0.5
6,468,717	+		PFLU_RS29090	0.67	+1.7
6,468,717	+		PFLU_RS29090	0.67	-0.7
6,468,717	+		PFLU_RS29090	0.67	+0.4
6,468,718	-		PFLU_RS29090	0.67	-2.1
6,468,811	+		PFLU_RS29090	0.73	-0.4
6,468,811	+		PFLU_RS29090	0.73	+0.6
6,468,811	+		PFLU_RS29090	0.73	-0.3
6,468,811	+		PFLU_RS29090	0.73	-2.2
6,468,812	-		PFLU_RS29090	0.73	-0.4
6,468,812	-		PFLU_RS29090	0.73	+2.0
6,468,812	-		PFLU_RS29090	0.73	-1.9
6,468,812	-		PFLU_RS29090	0.73	-1.1
6,468,873	+		PFLU_RS29090	0.76	+1.0
6,468,873	+		PFLU_RS29090	0.76	-2.0
6,468,880	-		PFLU_RS29090	0.77	-2.1
6,468,897	+		PFLU_RS29090	0.78	-0.3
6,468,897	+		PFLU_RS29090	0.78	-2.1
6,468,898	-		PFLU_RS29090	0.78	+0.2
6,469,232	+				-0.0
6,469,233	-				-0.3
6,469,233	-				-0.4
6,469,294	-				+0.9
6,469,294	-				-0.4
6,469,294	-				+0.7
6,469,294	-				-1.2
6,469,466	+				+0.6
6,469,466	+				+1.4
6,469,467	-				+0.1
6,469,467	-				+0.9
6,469,501	+				-0.6
6,469,501	+				-0.9
6,469,560	-				-1.8
6,469,560	-				-1.4
6,469,607	+				-0.8
6,469,608	-				-1.7
6,469,748	+		PFLU_RS29095	0.13	-1.1
6,469,748	+		PFLU_RS29095	0.13	-1.9
6,469,748	+		PFLU_RS29095	0.13	-0.8
6,469,748	+		PFLU_RS29095	0.13	-1.5
6,469,748	+		PFLU_RS29095	0.13	-2.4
6,469,748	+		PFLU_RS29095	0.13	-1.8
6,469,749	-		PFLU_RS29095	0.13	-0.4
6,469,749	-		PFLU_RS29095	0.13	-1.1
6,469,749	-		PFLU_RS29095	0.13	-1.7
6,469,890	-		PFLU_RS29095	0.19	-2.4
6,469,890	-		PFLU_RS29095	0.19	-1.5
6,469,890	-		PFLU_RS29095	0.19	-3.2
6,469,890	-		PFLU_RS29095	0.19	-2.0
6,469,890	-		PFLU_RS29095	0.19	-1.1
6,469,890	-		PFLU_RS29095	0.19	-1.8
6,469,890	-		PFLU_RS29095	0.19	-1.7
6,469,890	-		PFLU_RS29095	0.19	-1.0
6,469,939	-		PFLU_RS29095	0.21	-1.5
6,469,939	-		PFLU_RS29095	0.21	-2.8
6,469,939	-		PFLU_RS29095	0.21	-1.2
6,469,939	-		PFLU_RS29095	0.21	-1.1
6,469,939	-		PFLU_RS29095	0.21	-2.9
6,470,126	+		PFLU_RS29095	0.30	-1.3
6,470,126	+		PFLU_RS29095	0.30	-2.4
6,470,126	+		PFLU_RS29095	0.30	-1.6
6,470,127	-		PFLU_RS29095	0.30	-1.7
6,470,127	-		PFLU_RS29095	0.30	-1.5
6,470,127	-		PFLU_RS29095	0.30	-1.6
6,470,127	-		PFLU_RS29095	0.30	-2.8
6,470,127	-		PFLU_RS29095	0.30	-1.7
6,470,127	-		PFLU_RS29095	0.30	-1.8
6,470,135	+		PFLU_RS29095	0.30	-0.7
6,470,136	-		PFLU_RS29095	0.30	-0.2
6,470,136	-		PFLU_RS29095	0.30	-2.7
6,470,159	+		PFLU_RS29095	0.31	-1.3
6,470,159	+		PFLU_RS29095	0.31	-2.0
6,470,159	+		PFLU_RS29095	0.31	-0.6
6,470,160	-		PFLU_RS29095	0.31	-2.8
6,470,160	-		PFLU_RS29095	0.31	-2.9
6,470,160	-		PFLU_RS29095	0.31	-1.9
6,470,160	-		PFLU_RS29095	0.31	-1.4
6,470,160	-		PFLU_RS29095	0.31	-1.4
6,470,160	-		PFLU_RS29095	0.31	+0.2
6,470,160	-		PFLU_RS29095	0.31	+0.8