Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22515

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
5,065,353	+				-1.2
5,065,353	+				-0.2
5,065,354	-				-0.0
5,065,354	-				-2.3
5,065,354	-				+0.9
5,065,403	-				+1.5
5,065,403	-				+0.5
5,065,414	+				-1.0
5,065,414	+				-1.9
5,065,414	+				-0.5
5,065,414	+				-0.4
5,065,473	+				+1.5
5,065,473	+				+0.2
5,065,585	+		PFLU_RS22510	0.12	+0.5
5,065,585	+		PFLU_RS22510	0.12	-0.2
5,065,585	+		PFLU_RS22510	0.12	+0.2
5,065,585	+		PFLU_RS22510	0.12	-2.9
5,065,586	-		PFLU_RS22510	0.13	-0.1
5,065,586	-		PFLU_RS22510	0.13	+0.7
5,065,643	+		PFLU_RS22510	0.19	-0.7
5,065,643	+		PFLU_RS22510	0.19	-1.7
5,065,644	-		PFLU_RS22510	0.19	-0.4
5,065,644	-		PFLU_RS22510	0.19	+1.0
5,065,644	-		PFLU_RS22510	0.19	-0.2
5,065,644	-		PFLU_RS22510	0.19	-0.6
5,065,903	+		PFLU_RS22510	0.50	-0.4
5,065,903	+		PFLU_RS22510	0.50	-0.3
5,065,903	+		PFLU_RS22510	0.50	+0.7
5,065,903	+		PFLU_RS22510	0.50	+0.2
5,065,903	+		PFLU_RS22510	0.50	+0.5
5,065,903	+		PFLU_RS22510	0.50	+0.3
5,065,904	-		PFLU_RS22510	0.50	-0.3
5,065,904	-		PFLU_RS22510	0.50	+1.0
5,065,904	-		PFLU_RS22510	0.50	-2.0
5,065,921	+		PFLU_RS22510	0.52	+1.5
5,065,976	+		PFLU_RS22510	0.58	+0.1
5,065,976	+		PFLU_RS22510	0.58	+0.5
5,065,977	-		PFLU_RS22510	0.58	-1.5
5,065,977	-		PFLU_RS22510	0.58	+0.3
5,066,054	+		PFLU_RS22510	0.67	-0.5
5,066,054	+		PFLU_RS22510	0.67	-0.2
5,066,231	+		PFLU_RS22510	0.88	-0.5
5,066,231	+		PFLU_RS22510	0.88	-0.6
5,066,231	+		PFLU_RS22510	0.88	+1.0
5,066,231	+		PFLU_RS22510	0.88	-2.0
5,066,231	+		PFLU_RS22510	0.88	+0.4
5,066,231	+		PFLU_RS22510	0.88	-0.3
5,066,231	+		PFLU_RS22510	0.88	-0.4
5,066,231	+		PFLU_RS22510	0.88	-0.8
5,066,231	+		PFLU_RS22510	0.88	+1.3
5,066,231	+		PFLU_RS22510	0.88	-3.0
5,066,231	+		PFLU_RS22510	0.88	+1.5
5,066,232	-		PFLU_RS22510	0.88	-0.4
5,066,232	-		PFLU_RS22510	0.88	+0.7
5,066,232	-		PFLU_RS22510	0.88	-0.2
5,066,232	-		PFLU_RS22510	0.88	-2.1
5,066,232	-		PFLU_RS22510	0.88	+0.1
5,066,232	-		PFLU_RS22510	0.88	-2.1
5,066,232	-		PFLU_RS22510	0.88	-0.6
5,066,232	-		PFLU_RS22510	0.88	-2.4
5,066,232	-		PFLU_RS22510	0.88	-2.2
5,066,232	-		PFLU_RS22510	0.88	-0.3
5,066,233	+		PFLU_RS22510	0.88	-0.1
5,066,234	-		PFLU_RS22510	0.88	-0.3
5,066,234	-		PFLU_RS22510	0.88	-2.5
5,066,234	-		PFLU_RS22510	0.88	+1.1
5,066,234	-		PFLU_RS22510	0.88	-0.6
5,066,364	+				-0.6
5,066,364	+				-0.9
5,066,365	-				-0.3
5,066,424	+				-1.0
5,066,425	-				-0.3
5,066,425	-				+0.5
5,066,430	+				-0.3
5,066,431	-				+1.2
5,066,535	+		PFLU_RS22515	0.15	+0.3
5,066,643	+		PFLU_RS22515	0.23	+1.2
5,066,643	+		PFLU_RS22515	0.23	-0.8
5,066,643	+		PFLU_RS22515	0.23	-0.3
5,066,643	+		PFLU_RS22515	0.23	+0.7
5,066,643	+		PFLU_RS22515	0.23	-1.3
5,066,643	+		PFLU_RS22515	0.23	+0.4
5,066,643	+		PFLU_RS22515	0.23	+0.4
5,066,644	-		PFLU_RS22515	0.23	+0.4
5,066,644	-		PFLU_RS22515	0.23	-1.1
5,066,644	-		PFLU_RS22515	0.23	-0.9
5,066,644	-		PFLU_RS22515	0.23	-0.3
5,066,644	-		PFLU_RS22515	0.23	-0.9
5,066,644	-		PFLU_RS22515	0.23	+0.9
5,066,703	-		PFLU_RS22515	0.28	-0.5
5,066,749	+		PFLU_RS22515	0.31	+0.4
5,066,749	+		PFLU_RS22515	0.31	-1.3
5,066,750	-		PFLU_RS22515	0.31	+0.6
5,066,750	-		PFLU_RS22515	0.31	+1.2
5,066,859	+		PFLU_RS22515	0.40	-0.2
5,066,859	+		PFLU_RS22515	0.40	-0.3
5,066,860	-		PFLU_RS22515	0.40	-0.1
5,066,860	-		PFLU_RS22515	0.40	+0.2
5,066,937	+		PFLU_RS22515	0.46	-1.2
5,066,937	+		PFLU_RS22515	0.46	-0.4
5,066,937	+		PFLU_RS22515	0.46	-1.4
5,066,937	+		PFLU_RS22515	0.46	+0.9
5,066,937	+		PFLU_RS22515	0.46	-0.1
5,066,937	+		PFLU_RS22515	0.46	+0.6
5,066,937	+		PFLU_RS22515	0.46	-0.2
5,066,937	+		PFLU_RS22515	0.46	-1.8
5,066,937	+		PFLU_RS22515	0.46	-1.2
5,066,937	+		PFLU_RS22515	0.46	+1.5
5,066,938	-		PFLU_RS22515	0.46	-0.3
5,066,938	-		PFLU_RS22515	0.46	-0.3
5,066,938	-		PFLU_RS22515	0.46	-1.7
5,066,940	+		PFLU_RS22515	0.46	+0.8
5,066,940	+		PFLU_RS22515	0.46	-0.3
5,066,940	+		PFLU_RS22515	0.46	-0.8
5,066,941	-		PFLU_RS22515	0.46	-0.6
5,066,941	-		PFLU_RS22515	0.46	-3.1
5,066,941	-		PFLU_RS22515	0.46	-0.3
5,066,941	-		PFLU_RS22515	0.46	-1.1
5,067,027	+		PFLU_RS22515	0.52	+0.6
5,067,027	+		PFLU_RS22515	0.52	-1.2
5,067,027	+		PFLU_RS22515	0.52	-0.3
5,067,027	+		PFLU_RS22515	0.52	-0.2
5,067,027	+		PFLU_RS22515	0.52	-0.6
5,067,027	+		PFLU_RS22515	0.52	-0.7
5,067,028	-		PFLU_RS22515	0.52	-1.7
5,067,028	-		PFLU_RS22515	0.52	+1.0
5,067,028	-		PFLU_RS22515	0.52	-0.3
5,067,028	-		PFLU_RS22515	0.52	-0.3
5,067,028	-		PFLU_RS22515	0.52	-0.3
5,067,028	-		PFLU_RS22515	0.52	+0.4
5,067,102	+		PFLU_RS22515	0.58	+1.7
5,067,114	+		PFLU_RS22515	0.59	-0.8
5,067,114	+		PFLU_RS22515	0.59	-0.6
5,067,114	+		PFLU_RS22515	0.59	+0.7
5,067,115	-		PFLU_RS22515	0.59	-1.2
5,067,115	-		PFLU_RS22515	0.59	-0.9
5,067,115	-		PFLU_RS22515	0.59	-1.9
5,067,124	-		PFLU_RS22515	0.60	+0.8
5,067,360	+		PFLU_RS22515	0.78	+1.0
5,067,360	+		PFLU_RS22515	0.78	-2.3
5,067,360	+		PFLU_RS22515	0.78	-1.7
5,067,360	+		PFLU_RS22515	0.78	+0.5
5,067,360	+		PFLU_RS22515	0.78	-1.4
5,067,361	-		PFLU_RS22515	0.78	+0.5
5,067,361	-		PFLU_RS22515	0.78	-2.9
5,067,361	-		PFLU_RS22515	0.78	+0.9
5,067,361	-		PFLU_RS22515	0.78	-0.6
5,067,361	-		PFLU_RS22515	0.78	-0.3
5,067,361	-		PFLU_RS22515	0.78	+1.2
5,067,361	-		PFLU_RS22515	0.78	-0.7
5,067,412	-		PFLU_RS22515	0.82	-1.3
5,067,507	+		PFLU_RS22515	0.89	+1.4
5,067,507	+		PFLU_RS22515	0.89	-1.8
5,067,507	+		PFLU_RS22515	0.89	+0.1
5,067,507	+		PFLU_RS22515	0.89	+0.3
5,067,507	+		PFLU_RS22515	0.89	-2.9
5,067,508	-		PFLU_RS22515	0.89	-1.3
5,067,508	-		PFLU_RS22515	0.89	-0.3
5,067,508	-		PFLU_RS22515	0.89	-0.1
5,067,508	-		PFLU_RS22515	0.89	-1.9
5,067,615	+				+1.4
5,067,615	+				+0.2
5,067,615	+				-0.3
5,067,615	+				-0.3
5,067,615	+				+0.1
5,067,615	+				-2.2
5,067,616	-				-1.9
5,067,616	-				-0.5
5,067,616	-				-0.1
5,067,616	-				+0.2
5,067,616	-				+0.0
5,067,616	-				+0.1
5,067,616	-				-0.3
5,067,717	+				-0.3
5,067,718	-				-0.1
5,067,718	-				+1.5
5,067,772	-				-0.1
5,067,772	-				-0.9
5,067,775	+				+0.5
5,067,776	-				+0.4
5,067,784	-				-0.8
5,067,970	+		PFLU_RS22520	0.26	+0.5
5,067,970	+		PFLU_RS22520	0.26	+1.7
5,067,970	+		PFLU_RS22520	0.26	+0.8
5,067,970	+		PFLU_RS22520	0.26	+1.1
5,067,970	+		PFLU_RS22520	0.26	+0.6
5,068,000	+		PFLU_RS22520	0.30	-0.4
5,068,448	+		PFLU_RS22520	0.88	+2.2
5,068,449	-		PFLU_RS22520	0.88	+0.4
5,068,449	-		PFLU_RS22520	0.88	+0.5
5,068,449	-		PFLU_RS22520	0.88	-0.2
5,068,457	-		PFLU_RS22520	0.89	-0.2
5,068,577	-				-0.5
5,068,579	+				-0.5
5,068,579	+				+1.1
5,068,605	+				+0.8
5,068,605	+				-0.2
5,068,605	+				+0.7
5,068,605	+				+0.1
5,068,606	-				+1.7
5,068,606	-				+0.3
5,068,631	-				+0.1
5,068,631	-				-0.8