Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS18310

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
4,153,240	+				-0.3
4,153,306	+				+0.3
4,153,306	+				+0.7
4,153,306	+				+0.7
4,153,307	-				-0.8
4,153,307	-				+0.5
4,153,338	-				+0.2
4,153,344	+				+2.9
4,153,345	-				-0.6
4,153,355	+				+0.8
4,153,355	+				+0.5
4,153,358	+				-1.1
4,153,358	+				-0.3
4,153,358	+				-0.6
4,153,358	+				+0.7
4,153,358	+				-1.7
4,153,358	+				-1.0
4,153,358	+				-0.1
4,153,358	+				-1.5
4,153,358	+				+0.1
4,153,358	+				+0.2
4,153,358	+				+0.2
4,153,358	+				+0.5
4,153,358	+				-1.3
4,153,359	-				+1.0
4,153,359	-				-0.1
4,153,359	-				-0.1
4,153,359	-				-0.5
4,153,359	-				-0.2
4,153,359	-				-0.2
4,153,359	-				-0.6
4,153,359	-				+0.7
4,153,359	-				+0.7
4,153,359	-				+1.7
4,153,362	+				+0.3
4,153,362	+				-0.6
4,153,362	+				-3.2
4,153,362	+				+0.8
4,153,362	+				+1.0
4,153,362	+				+0.3
4,153,362	+				+0.6
4,153,362	+				+1.6
4,153,362	+				-0.3
4,153,362	+				-0.1
4,153,362	+				-0.6
4,153,362	+				-0.3
4,153,362	+				+0.4
4,153,363	-				+0.6
4,153,363	-				-1.3
4,153,363	-				-0.1
4,153,363	-				-1.6
4,153,363	-				-1.1
4,153,363	-				-1.2
4,153,363	-				-0.9
4,153,425	+				-1.7
4,153,425	+				-0.1
4,153,425	+				-0.1
4,153,426	-				-0.4
4,153,426	-				+0.2
4,153,426	-				+0.7
4,153,426	-				+0.3
4,153,426	-				+0.8
4,153,426	-				-0.6
4,153,426	-				+0.7
4,153,431	-				-0.3
4,153,438	+				+0.9
4,153,439	-				-0.2
4,153,448	-				+0.4
4,153,448	-				+0.3
4,153,461	+				-0.2
4,153,461	+				+0.5
4,153,462	-				-1.5
4,153,462	-				+1.2
4,153,462	-				+0.5
4,153,462	-				+3.0
4,153,462	-				-0.4
4,153,530	+		PFLU_RS18305	0.26	+1.7
4,153,530	+		PFLU_RS18305	0.26	+0.5
4,153,530	+		PFLU_RS18305	0.26	-0.4
4,153,530	+		PFLU_RS18305	0.26	+0.2
4,153,531	-		PFLU_RS18305	0.26	+0.0
4,153,531	-		PFLU_RS18305	0.26	+0.7
4,153,531	-		PFLU_RS18305	0.26	-0.8
4,153,531	-		PFLU_RS18305	0.26	+0.2
4,153,531	-		PFLU_RS18305	0.26	-1.7
4,153,619	+		PFLU_RS18305	0.59	+0.1
4,153,619	+		PFLU_RS18305	0.59	-1.3
4,153,619	+		PFLU_RS18305	0.59	+0.4
4,153,620	-		PFLU_RS18305	0.59	+0.5
4,153,620	-		PFLU_RS18305	0.59	-0.4
4,153,622	+		PFLU_RS18305	0.60	-0.4
4,153,622	+		PFLU_RS18305	0.60	+0.7
4,153,622	+		PFLU_RS18305	0.60	+0.0
4,153,623	-		PFLU_RS18305	0.60	-0.7
4,153,652	+		PFLU_RS18305	0.71	+0.1
4,153,653	-		PFLU_RS18305	0.71	-0.2
4,153,676	-		PFLU_RS18305	0.80	+1.3
4,153,688	+		PFLU_RS18305	0.84	+1.1
4,153,688	+		PFLU_RS18305	0.84	-0.1
4,153,688	+		PFLU_RS18305	0.84	+0.2
4,153,689	-		PFLU_RS18305	0.85	-0.9
4,153,689	-		PFLU_RS18305	0.85	+1.2
4,153,702	+		PFLU_RS18305	0.90	-1.9
4,153,718	+				+0.4
4,153,723	+				-1.6
4,153,724	-				+0.1
4,153,766	+				-1.5
4,153,766	+				-2.0
4,153,766	+				+0.9
4,153,807	+				+0.1
4,153,807	+				-0.7
4,153,808	-				-2.3
4,153,808	-				+0.2
4,153,808	-				-0.3
4,153,808	-				+1.3
4,153,820	-				-0.3
4,153,836	+				+1.3
4,153,951	+				-1.3
4,153,951	+				-0.3
4,153,951	+				-0.7
4,153,951	+				-0.3
4,153,952	-				-0.2
4,153,962	+				+0.8
4,153,962	+				+0.9
4,153,962	+				+3.1
4,153,962	+				+1.9
4,153,963	-				-1.0
4,154,188	+		PFLU_RS18310	0.37	+0.7
4,154,188	+		PFLU_RS18310	0.37	-0.7
4,154,188	+		PFLU_RS18310	0.37	-0.7
4,154,188	+		PFLU_RS18310	0.37	-2.2
4,154,188	+		PFLU_RS18310	0.37	-0.1
4,154,189	-		PFLU_RS18310	0.37	-0.6
4,154,189	-		PFLU_RS18310	0.37	+1.1
4,154,189	-		PFLU_RS18310	0.37	+0.6
4,154,189	-		PFLU_RS18310	0.37	-0.4
4,154,189	-		PFLU_RS18310	0.37	+1.0
4,154,189	-		PFLU_RS18310	0.37	-0.3
4,154,189	-		PFLU_RS18310	0.37	-0.7
4,154,189	-		PFLU_RS18310	0.37	-2.4
4,154,189	-		PFLU_RS18310	0.37	+0.4
4,154,239	+		PFLU_RS18310	0.44	+0.7
4,154,239	+		PFLU_RS18310	0.44	+1.1
4,154,239	+		PFLU_RS18310	0.44	-0.7
4,154,239	+		PFLU_RS18310	0.44	+0.5
4,154,239	+		PFLU_RS18310	0.44	+1.0
4,154,239	+		PFLU_RS18310	0.44	+0.7
4,154,240	-		PFLU_RS18310	0.44	+0.2
4,154,240	-		PFLU_RS18310	0.44	+1.2
4,154,240	-		PFLU_RS18310	0.44	-0.4
4,154,240	-		PFLU_RS18310	0.44	+0.4
4,154,240	-		PFLU_RS18310	0.44	+1.0
4,154,240	-		PFLU_RS18310	0.44	-1.5
4,154,240	-		PFLU_RS18310	0.44	-0.5
4,154,240	-		PFLU_RS18310	0.44	+1.0
4,154,240	-		PFLU_RS18310	0.44	-0.8
4,154,240	-		PFLU_RS18310	0.44	+0.6
4,154,240	-		PFLU_RS18310	0.44	+0.2
4,154,240	-		PFLU_RS18310	0.44	-0.6
4,154,240	-		PFLU_RS18310	0.44	-0.2
4,154,240	-		PFLU_RS18310	0.44	-0.8
4,154,243	+		PFLU_RS18310	0.45	+0.6
4,154,243	+		PFLU_RS18310	0.45	+0.3
4,154,243	+		PFLU_RS18310	0.45	+0.1
4,154,244	-		PFLU_RS18310	0.45	+1.3
4,154,244	-		PFLU_RS18310	0.45	+0.4
4,154,244	-		PFLU_RS18310	0.45	+0.0
4,154,244	-		PFLU_RS18310	0.45	+1.5
4,154,244	-		PFLU_RS18310	0.45	-0.6
4,154,287	+		PFLU_RS18310	0.51	+0.3
4,154,287	+		PFLU_RS18310	0.51	+0.7
4,154,287	+		PFLU_RS18310	0.51	-0.5
4,154,287	+		PFLU_RS18310	0.51	-0.8
4,154,287	+		PFLU_RS18310	0.51	+0.2
4,154,288	-		PFLU_RS18310	0.51	+1.0
4,154,425	+		PFLU_RS18310	0.69	+0.8
4,154,425	+		PFLU_RS18310	0.69	-1.3
4,154,426	-		PFLU_RS18310	0.69	-1.0
4,154,426	-		PFLU_RS18310	0.69	+0.4
4,154,426	-		PFLU_RS18310	0.69	-0.1
4,154,426	-		PFLU_RS18310	0.69	-0.3
4,154,432	+		PFLU_RS18310	0.70	+0.2
4,154,432	+		PFLU_RS18310	0.70	+0.2
4,154,432	+		PFLU_RS18310	0.70	+0.1
4,154,432	+		PFLU_RS18310	0.70	-0.8
4,154,432	+		PFLU_RS18310	0.70	+0.7
4,154,433	-		PFLU_RS18310	0.70	-0.3
4,154,433	-		PFLU_RS18310	0.70	-0.3
4,154,433	-		PFLU_RS18310	0.70	-0.4
4,154,433	-		PFLU_RS18310	0.70	-0.7
4,154,446	+		PFLU_RS18310	0.72	+0.6
4,154,446	+		PFLU_RS18310	0.72	-0.3
4,154,642	+				-0.9
4,154,642	+				+0.3
4,154,642	+				-0.0
4,154,643	-				+1.4
4,154,643	-				-1.9
4,154,643	-				-1.3
4,154,714	+				+0.7
4,154,756	+				+0.4
4,154,756	+				+2.3
4,154,756	+				+0.5
4,154,756	+				+0.5
4,154,756	+				-0.2
4,154,756	+				-0.4
4,154,756	+				-0.3
4,154,756	+				-0.7
4,154,756	+				-0.5
4,154,756	+				-0.3
4,154,757	-				-1.2
4,154,757	-				+1.7
4,154,757	-				+1.4
4,154,757	-				-0.1
4,154,757	-				-2.2
4,154,757	-				+0.7
4,154,757	-				+0.8
4,154,757	-				+0.1
4,154,757	-				+0.0
4,154,757	-				-1.9
4,154,762	+				+1.5
4,154,762	+				+0.1
4,154,763	-				+0.2
4,154,763	-				+0.4
4,154,763	-				-0.5
4,154,763	-				+0.9
4,154,763	-				-0.4
4,154,763	-				-1.7
4,154,795	-				+0.2
4,154,795	-				-0.1
4,154,823	+				+0.3
4,154,823	+				-0.8
4,154,823	+				-0.9
4,154,823	+				+0.3
4,154,823	+				-0.7
4,154,823	+				-0.7
4,154,824	-				+0.4
4,154,824	-				-1.1
4,154,824	-				+1.9
4,154,824	-				-1.0
4,154,824	-				+1.3
4,154,824	-				-1.9
4,154,824	-				-0.4
4,154,824	-				-0.5
4,154,824	-				-1.2
4,154,825	+				+0.0
4,154,835	-				-0.0
4,154,835	-				+0.8
4,154,835	-				-0.3
4,154,835	-				+0.3
4,154,903	+				-1.0
4,154,903	+				-0.1
4,154,903	+				+1.0
4,154,903	+				-0.4
4,154,903	+				-2.2
4,154,903	+				-1.0
4,154,903	+				+0.4
4,154,903	+				+0.8
4,154,903	+				-1.3
4,154,903	+				-1.6
4,154,904	-				-0.3
4,154,904	-				-0.8
4,154,904	-				-1.1
4,154,904	-				-1.3
4,154,904	-				+1.1
4,154,904	-				+1.5
4,154,919	+				+1.1
4,154,920	-				+0.0
4,154,920	-				+1.1
4,154,935	+				-2.1
4,154,935	+				+0.8
4,154,935	+				+0.2
4,154,935	+				+0.8
4,154,935	+				-0.2
4,154,935	+				+1.3
4,154,935	+				-1.0
4,154,935	+				-0.6
4,154,936	-				-0.4
4,154,936	-				+0.2
4,154,936	-				+0.0
4,154,936	-				+0.6
4,154,936	-				+0.4
4,154,936	-				+1.0
4,154,936	-				+1.1
4,154,936	-				+0.8
4,154,936	-				+0.7
4,154,936	-				+0.4
4,154,936	-				-1.8
4,154,936	-				+1.3
4,154,936	-				-2.2
4,154,936	-				+1.3
4,154,936	-				+1.0
4,154,936	-				+0.6
4,155,030	+				+1.4
4,155,030	+				-1.7
4,155,030	+				-0.0
4,155,030	+				-0.1
4,155,030	+				-1.7
4,155,030	+				-2.1
4,155,031	-				-1.1
4,155,031	-				-1.0
4,155,031	-				-0.7
4,155,031	-				-0.9
4,155,031	-				+0.9
4,155,031	-				+1.2
4,155,034	+				-0.7
4,155,034	+				-1.0
4,155,035	-				+1.2
4,155,035	-				-0.9
4,155,035	-				-2.0
4,155,035	-				+1.1
4,155,035	-				-0.6
4,155,045	+				-1.6
4,155,140	+				+0.4
4,155,140	+				-0.8
4,155,140	+				+0.4
4,155,140	+				+0.2
4,155,141	-				-0.8
4,155,141	-				-1.5
4,155,141	-				+0.6
4,155,141	-				-2.1
4,155,141	-				+0.3
4,155,141	-				+0.2
4,155,253	+		PFLU_RS18315	0.32	-0.9
4,155,254	-		PFLU_RS18315	0.32	-1.2
4,155,317	+		PFLU_RS18315	0.50	-0.6
4,155,318	-		PFLU_RS18315	0.50	-2.5
4,155,367	-		PFLU_RS18315	0.64	-1.5
4,155,428	+		PFLU_RS18315	0.81	-1.1
4,155,428	+		PFLU_RS18315	0.81	-0.2
4,155,428	+		PFLU_RS18315	0.81	+0.0
4,155,428	+		PFLU_RS18315	0.81	+0.2
4,155,429	-		PFLU_RS18315	0.81	-0.2
4,155,429	-		PFLU_RS18315	0.81	+1.7
4,155,429	-		PFLU_RS18315	0.81	-2.4
4,155,429	-		PFLU_RS18315	0.81	-0.7
4,155,481	+				-2.6
4,155,481	+				-0.8
4,155,481	+				-0.3
4,155,495	+				-0.3
4,155,496	-				+2.2
4,155,577	+				+0.5
4,155,577	+				-1.3
4,155,577	+				+0.3
4,155,577	+				+0.3
4,155,578	-				-1.4
4,155,578	-				-0.8